Notothenia coriiceps (black rockcod): 104951536
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Entry
104951536 CDS
T04920
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00310
Lysine degradation
ncc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104951536 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104951536 (prdm2)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104951536 (prdm2)
Enzymes [BR:
ncc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104951536 (prdm2)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104951536 (prdm2)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104951536 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2HC_2
zf-C2H2_jaz
zf-C2HE
zf-H2C2_2
TPR_Trm732
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
104951536
NCBI-ProteinID:
XP_010776506
UniProt:
A0A6I9NIX3
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MACTGGAVESRDTIPAHVWKGLPDCLHLGPSAINPSRVGVWATRAIPKGKKFGPFVGEKK
KRSQVTSNVFMWEVYFPARGWMCVDATDPMKGNWLRYVNWARSTEEQNLFPLEINRAIYY
KVLRPIGPGEELLVWYTVEDNPEITAALEEERASSLSRNNSPKAKRARKKLLDTARQAGL
GGDKKTKVTKPSVREMWDGGKSLKEEDERQSTLAPPHKPQATHPKASIDHKEVEDMSAVM
TDRGHGEEEEDEEEEDADGYEGSGEVQQQTTQHSHVAVSMQNKPPGSLLTGVEESHNYSQ
GKLDSREPEPDPDLDLDPDLEGDLEGESYPCQHCERHFSTRQGLERHIHIHAISNQQSQM
FKCRYCSKSFGSQVGRRRHERRHESGLKKKPGSLAGTASLLSPVMQTDGSSPDCTSPTSH
YIAIGSQFTGVPLHNADMQRKEIGPYADRPFILDENGESKELHPCKYCNKAFGTHTNMRR
HQRRIHERHLLPKGVRRKGMLLQEASVQKQQQPDESPSTSPPTVYVPSADTEDEVDRDDY
AVDISKNISENLSFYIDGKIVSTSSVSSCEVIEVDSRSAALFGLDTVILSPDQISQALKV
EGRTSAAKHVSNIGQPAAKRRTSTPPFVPSLKVESESATFTASSSSSSSSTSSSSNLLVS
SLFQQAVDSSAFQREKTVYLSPKLKQLLQTQDIQKSTLSLITESHRLASPLSVTPLPGAS
GRFKRRTSSPPSSPQLSPACKTESCKPDVVSSFVLKVPKVESRCASPPGILLDKEDGDSL
SLTENDMHGQTSSNSGGNSCNQQPLDLSNSVSRRRDSSTKVLGDSALDLSFHRKSNAELE
SKGSLAPQPPTKKRKPNTSMLEKVLMNEYLGLPLPAEEGPSAIPNLNCFPTRSPNVALET
PHPSPPSLTPVTMNPSSPGNSSMTSPTPPPPLLPTIPSPPAMPSSPVSQPLDSPAARPLP
VLSPKMSPRSAEDMSESEENLFAEENKEEEENHISKPLDSPNTPLKDPLNSSSASSPPES
TSVDLSTAEDVSLTCNSLLNNKINQNQDSEAEKSLPASPECTSLSSSPPPASHDPSPSLV
SQALPQIKVKEEPQHCTDELPVMNHAPQDEVNSSPHSPNKPSDKTSEAEKVDSAYCKTFV
CNVCEEPFNSIKELSGHITEHAADWPFKCEFCVQLFEDAPALLAHRSALHGVGRICVCSV
CSKEFAFLSNLEQHQKDLHPSETCSHTTVESGKLRPQNYTDPSRAKEESSPSTPAPETTN
EAAPHSDADVAKEEPDVNGNHAEEVAEDPNEELYTTIKIMASEGGKPKGPDVRLGINQHY
PSYKPPPFPYHSRSHAGSVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILAC
ATASDKKRYTPKKNPIPLKQIVKSPNGVVSPSAAIAGQSPFRRMGQPKRLNFNQDNGKTK
MSALSKKKNQLVQKAISQKNKAATTAKKAIVKVEEEQASNVCPHCSREFTYPASLNKHMA
VSCPMKPVVKRGKKGLAEVKKEPVSALDKSISLRKKASDCEIPQAEPEPKPLGKTRARSS
VAADPEPSQTSKAKPAAALGKLKRPASFPVPVSASKKTKKSHAQSLPPTPSDPDTPSEAA
PQRPAMRMQRMGKEATPKRLSEAKSPPQPKKEERFSLRTRVGGPVTRRQMVNTAPSAEVK
AEEPPIQEPKETQEVLMK
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtactggaggggcggtggagagtcgggatacaattccagctcatgtgtggaag
ggtttacctgactgcttgcatctgggaccttccgctataaatccaagccgtgtcggtgtc
tgggccactcgggcgatccctaaaggcaagaagtttggcccatttgtcggagagaagaaa
aaaaggtcccaggtgaccagtaatgtattcatgtgggaggtttatttcccagcgcgagga
tggatgtgtgttgacgccacagaccccatgaaggggaactggctgcgatacgtcaactgg
gctcgctccactgaagagcagaatcttttccctctggagatcaacagagccatttactac
aaagttttgaggcctatcgggccgggagaggagctgctggtgtggtacactgtggaagac
aaccccgagataacagctgcactggaggaagaaagagccagcagtctgagcaggaacaac
tcacccaaggcgaagcgagccagaaagaagctgctggatacagccagacaggctggtttg
ggtggagacaagaaaacaaaagtaaccaaaccatctgtcagggagatgtgggatgggggg
aaaagtctgaaggaggaggatgagaggcaatcaactttagcacccccacataaaccccag
gcaacccatccgaaggcaagcattgaccataaggaggtggaggacatgtcagcagtgatg
acggacaggggacatggggaggaagaagaagatgaagaggaggaggatgctgatggttac
gagggatcgggtgaagtgcagcagcaaactactcagcattcacatgtggctgtttccatg
caaaataagcctcctggctctttacttaccggtgttgaagaaagccataattactcgcag
ggaaagttagattctagagaaccagagccggatcctgatcttgacctcgaccccgacctt
gagggtgacctagagggtgagtcatatccctgtcagcactgtgagcgtcacttctccacc
agacagggtctggagcgtcacatacacatccatgctatctctaatcagcaatcgcaaatg
ttcaagtgccggtactgcagcaaatccttcggctcacaggtggggcggcggcggcatgag
aggaggcatgagagtgggcttaagaaaaagccgggctctctggcagggacagccagttta
ctcagtcctgtgatgcagactgatggttcaagtccggattgcaccagtccaacaagtcac
tatatagccatagggtcccagtttactggagtacctctgcacaacgctgacatgcagaga
aaggaaatagggccttatgctgaccgtccctttatattggatgaaaatggggagtcaaag
gagctccacccctgcaagtattgcaataaagcatttggcacacacaccaacatgcgccga
catcaacgcagaatacatgaaaggcacctgctacctaaaggagttcgcaggaaaggcatg
ctgcttcaagaggcttccgtgcagaaacagcagcagcctgacgagtcccccagcaccagc
cccccgactgtctacgtgcccagtgcggacacagaagatgaggtagacagggatgattac
gcagttgacatatccaaaaacatatcggagaatttgagcttctacattgacggcaagatt
gtgtccaccagttcagtgagcagctgcgaggtgatagaggtggactccagatctgcagct
ctgtttggtctggacacggtcatcctcagccctgatcagatcagtcaggcgctaaaggtg
gaggggagaacgagtgccgcaaagcatgtctctaacatcggccagccggcagcaaaaaga
agaacatctacgcccccatttgttcccagccttaaagtggagtccgaatcagcgacgttc
acagcctcgtcatcctcgtcatcctcctccacatcgtcctcatctaacctactagtgagc
agtctgtttcaacaagctgtcgattcatcagcatttcaacgagagaaaaccgtgtatcta
tcacctaagctcaaacagctccttcagacacaagacattcagaaatccaccctctctctg
ataacagaaagccatagactggcctccccgctgtcggtgacgccgctaccaggggcttca
ggcaggtttaaaagaagaacgtcctctcccccttcgtctccacaacttagtcctgcatgt
aaaacagagagctgtaaacccgacgtggtgagctcattcgtcctcaaggtgccaaaggtg
gagagccgctgcgcctcccctcctgggattctactggacaaggaagatggagacagcctg
agcctcactgagaacgatatgcacggccaaacctcatctaatagcggtggaaattcttgt
aatcagcagcccttggatctgtcgaactccgtcagtaggaggagggacagctcgacgaag
gtgctgggggattcagctctggatttaagctttcatcggaagagcaacgctgagcttgaa
tccaagggaagtctagctccacagcccccgacaaaaaagagaaagccaaacaccagtatg
cttgaaaaagtgctgatgaatgagtatttaggtctgcctttgccagcagaggagggcccc
tcagccatacccaatttaaactgtttccccactcgctctccaaacgttgctttagaaacg
ccccacccctccccaccctctttgacccctgtcaccatgaacccctcttcccctggcaac
tccagtatgacatctcctactccgcctccacctctactgcctaccataccttctccaccg
gctatgcctagctcgcctgtttctcaacctttagactcccctgcagcgagacctcttcct
gtcctctcaccgaaaatgtctccgagatcagccgaagacatgtcagaatcggaggagaat
ttgtttgctgaagaaaacaaagaagaggaagagaaccatatctctaagccactggactcc
ccaaacactccacttaaagatcctctcaatagttcgtcggcatcaagccctcctgagtcg
acatcagtagatctgtccactgcggaggatgtttctttgacttgcaacagtctgttaaat
aacaaaattaaccaaaaccaagactcggaagcagagaaatctcttcctgcttctccagaa
tgcacatctctctcatcatctcctccccctgcctcacatgatccatcaccatcactggtt
tcacaggccttgcctcagattaaggtaaaagaagagcctcagcactgcacagatgagctg
ccggttatgaatcacgcacctcaggatgaagtcaactcttcacctcactctcccaataaa
ccgtctgataaaacctcggaggcagaaaaggttgactcggcatactgcaagacttttgtg
tgtaacgtctgcgaggagccgttcaactccatcaaggagctcagtggacatatcacggag
cacgctgctgattggcccttcaagtgtgaattctgtgtgcagctgtttgaagacgccccg
gccctgctggctcaccgctcggcactacacggagtgggcaggatctgtgtgtgctccgtt
tgttccaaggagtttgcatttctctctaacctcgagcagcaccaaaaagatctgcatcca
agcgagacgtgttcacataccactgtggagagcggcaagcttaggccacagaactacacg
gatccatccagagccaaagaggagagcagtccctcaacaccagcaccagagacgacaaat
gaagctgctccacacagtgatgctgatgtagcaaaagaagagcccgacgttaatggcaat
catgcagaagaggtggcggaggaccccaatgaggagctgtacactacaataaagatcatg
gcctcagaaggaggcaagcctaaaggcccagatgttcgcctcggcattaaccaacactac
cccagttataaacccccaccctttccttatcacagccgttcccatgctggctctgtagcc
tcggccacgaacttcaccacccacaacataccacaaactttcagcactgccatacgctgc
actaagtgtggcaacagcttcgacaacatgcccgaactgcacaagcacattttggcttgt
gccactgctagtgataaaaaacgctacactcccaagaaaaaccccatccccctcaagcaa
atagtaaagagtcccaacggagtggtgtcgccctcagctgccatcgcaggccaaagtcct
ttccgtaggatgggtcagccaaagagactgaactttaatcaagataatggtaaaacaaaa
atgagtgcgctcagtaagaagaaaaaccagctggtccagaaggcaatttcacagaaaaac
aaagctgccactactgcaaagaaggctattgttaaggttgaagaagagcaggcctctaat
gtttgcccccactgcagtcgggagtttacttatcctgcaagtctcaataaacatatggca
gtcagctgtcccatgaagcctgttgttaaaagaggcaagaaaggtctagctgaggtgaaa
aaggagccagtgtctgcgctcgataaaagcattagtcttagaaagaaagcttcagactgt
gaaataccgcaggcagagccggagcccaaacctctgggaaagaccagagcccgtagctcg
gtggcagcggaccccgaaccctctcagacaagcaaggcaaaacctgcggctgcgctgggc
aaactaaagaggcctgcctccttcccagtgccagtttctgccagcaagaaaacaaaaaag
agtcacgctcagtctctacctcccaccccctcagacccagacactcccagcgaagcagcg
ccacaacggccagccatgaggatgcagcgcatgggcaaagaggcaacacccaagagatta
tcagaggccaaatctccaccacagccgaagaaagaggagcggttctcccttcgaacgaga
gtagggggtccggtcaccaggagacagatggtcaacacagctccttctgctgaggtgaaa
gcagaagagccaccaattcaagagccaaaagagactcaggaggtgctgatgaagtga
DBGET
integrated database retrieval system
