Notothenia coriiceps (black rockcod): 104951560
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Entry
104951560 CDS
T04920
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104951560 (apex2)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104951560 (apex2)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104951560 (apex2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
104951560
NCBI-ProteinID:
XP_010776543
UniProt:
A0A6I9NNE1
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MKIVTWNINGIRTFRGGIKKALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVSTYCKDSATPCAAEEGLTGLLTHHEGAVGCYGDQSEFCSEELQLLDNEGRTV
ITQHRVMCQDKEQTVTVINVYCPRADPEKPERKQFKLQFYKLLQSRAEAILKDGSHVIVL
GDVNTSHRQIDHCDPSDIEDFVENPGRKWLNGFLHSETNEEEPKEEPEVTSSDPVHGGKF
MDTFRHFHPTRTSAFTCWSTMTGARQTNYGTRIDYIFADCQLAKEQFVAADIMPEVEGSD
HCPVWGKLSCSLLPSSKAPPFCTCYLPEFAGKQQKLSRFFVKVDQKTIQSEHREALPGSQ
EEEELRENLKPSGAGNASGKKRLLTTSDSVVPKGKKAKTCPKPQGSLLSFFKPKLPTAAP
STEAPEKKTLGTDKVTSSQNSQKACTTSKDTSSVTSSETVPELLDDASPKLCTSMKSDKP
MNLKPLAPAPDGGESGAKKGASLGFWKSVLHGPPPPPSCKVHREPCVLRTVKKEGPNMGK
QFFVCARPQGHASNPDARCSFFAWVEKGK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaatggcataaggactttcagaggaggcattaaaaag
gctcttgattctctggacgcggatataatctgtgttcaagagacaaaagtgacaagagac
ttgcttgatgagaggactgccattgttgacggatacaactcttatttcagcttcagtcga
ggacgcagcggctattcaggggtttccacttactgtaaagacagtgccaccccatgtgct
gctgaagagggtctcaccggtctgctgacccaccatgaaggagctgttggatgttatgga
gaccagtctgagttctgcagcgaggaactgcagcttctggacaatgaaggacgaaccgtt
atcacacagcacagagtcatgtgtcaggacaaagaacaaactgtaactgtgatcaacgtg
tactgtccgcgggccgaccctgaaaagccggagcgaaagcagttcaagcttcagttctac
aaactgcttcagagtcgggctgaagctatactgaaagatgggagccacgtgattgtttta
ggagatgtaaacacgtctcaccggcaaatagaccactgtgaccccagcgatattgaggat
ttcgttgaaaaccctgggaggaaatggctgaatggcttcttgcacagtgaaacgaatgag
gaagaacccaaggaagaacctgaggtaacttcctcagatcccgtccacggtgggaaattt
atggatacatttcgccacttccatccgactcgcaccagcgccttcacgtgctggtccacc
atgactggagcgcggcagaccaactacggcacgcgcattgactacatcttcgccgactgc
cagctggccaaagagcagttcgtggcggcggacatcatgccggaggtggaggggtcggac
cactgccctgtgtgggggaagctgagctgctccctcctgcccagctccaaggctcccccc
ttctgcacatgctacctgccagagtttgcaggcaagcagcagaaactgtcccgcttcttt
gttaaagtggaccagaaaacgattcagtccgagcacagggaggcattacctggatctcag
gaagaggaggaattgagggagaatttaaagccatccggagctggaaacgcctctggtaaa
aaacggttattaacaacatcagactcggttgtcccaaaggggaaaaaggctaagacttgt
ccaaagccacagggcagcctcctctcctttttcaaacccaaacttcctacggctgctccc
tctaccgaagcccctgaaaagaaaacactcggcacggacaaagtaacctcttctcaaaac
tcccaaaaagcgtgcacaaccagcaaagacacatcctcagtcacaagcagcgaaactgtc
cctgagctcctcgatgatgcttcaccaaagctctgcacctcaatgaaaagtgacaaaccg
atgaatctaaaacctttagccccagcgcccgatgggggagagtccggtgccaaaaaaggg
gcttcgttagggttctggaagtccgtgcttcatggtccgcctccaccgccctcctgtaag
gtccatagggaaccctgtgtgctgcgtacggtgaagaaggaggggccgaacatggggaaa
cagttctttgtttgcgcccgtcctcagggacacgcctccaaccccgacgctcggtgtagt
ttctttgcgtgggtggagaagggaaagtaa
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