Notothenia coriiceps (black rockcod): 104951564
Help
Entry
104951564 CDS
T04920
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04115
p53 signaling pathway
ncc04120
Ubiquitin mediated proteolysis
ncc04137
Mitophagy - animal
ncc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104951564 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104951564 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104951564 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
104951564 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104951564 (siah1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104951564 (siah1)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104951564 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
104951564
NCBI-ProteinID:
XP_010776547
UniProt:
A0A6I9NJ11
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MKNNKNQYKEIVFILPSQDKSNVEVHHVVLPPPILLFNTLSFLADSISFDVDVSEVNSQG
LRGQNSQMCKMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLP
PILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLP
HTDKTEHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDI
NLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGH
RRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaacaaaaaccagtataaagaaattgtatttatacttccatctcaagataaa
agcaatgttgaagttcaccatgtggtcctcccgcctcccatccttctctttaacactctc
tcctttttagccgattccatcagttttgatgtagatgtgtcagaggtaaacagccaggga
cttagaggtcagaactcacagatgtgcaaaatgagtcgccagactgccaccgcgctgccc
actggaacctccaagtgccccccctcccagcgcgtccccaccctgtcaggcaccacggcc
tccaacagcgacctggccagcctgttcgagtgccccgtctgcttcgactatgtgctcccc
cccatcctgcagtgccagtccggacacctggtatgctcgaactgccggcccaagctcacc
tgctgccccacctgccgggggcccctgggctccatcaggaacctggccatggagaaggtg
gccaactcggtcctcttcccctgcaagtacgcctcgtcgggctgcgaggtcaccctgccc
cacacggacaagacggagcacgaagagctctgcgagttccggccgtactcctgcccctgc
cccggggcctcctgcaagtggcagggctccctggacgctgtcatgccccacctgatgcac
cagcacaagtccatcaccacgctgcagggggaggacatagtgttcctggccacggacatc
aacctgccgggcgccgtggactgggtgatgatgcagtcctgcttcggcttccacttcatg
ctggtgctggagaagcaggagaagtacgacggccaccagcagttcttcgccatcgtgcag
ctcatcgggacccgcaagcaggcggagaacttcgcctaccggctggagctcaacgggcac
cggcgccgcctcacctgggaggccacgccgcgctccatccacgagggcatcgccacggcc
atcatgaacagcgactgcctggtgttcgacacgtccatcgcacagctgttcgcagagaac
ggcaacctggggatcaacgtcaccatctccatgtgctaa
DBGET
integrated database retrieval system
