Notothenia coriiceps (black rockcod): 104952140
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Entry
104952140 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K27409
spectrin beta, erythrocytic
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104952140
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104952140
Intermediate filaments
Intermediate filament-binding proteins
104952140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
Muted
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
104952140
NCBI-ProteinID:
XP_010777202
UniProt:
A0A6I9NKS6
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MFILTFLSPPGYKPCDPQVIRDRVQHLDLCYQELCALAAQRRARLEQSRLFWNFLWETAE
LESWIREKEHLFSSLDYGKDLTSVLVLQSKHSAFEDELGARRANLDQVQAEGQKMIEAEH
YGSPKVQERMDDIRRQWQQLEELAAFRKQNLQDTQRFFQFQGDADELKAWLLGAKRQMSS
DDVGHDEYTTQRLLKKHRDLKNETTKNGATIDALSKQANALPEELQNTPDIQRRLKDIKD
LFMELMSLADLRQKKLDDAMSLYTIFSETDACELWMGQKETWLVGLEVPKKLEDLEVVQN
RLSILAQDMANVQSRVDDVNQAVKQLEDSRHPRTREVKECQMRLNKRWEAFKAMVEDKKR
KVDSAASLNNYGLECDETESWIKDKTRVIESTVDLGNDLAAVMTIQRKLFGMERDLAAIE
NKLTFLRNEADQLAKDHPESAGDILARRGELDAAWDELKKTLKDREDSLGEVSKLQTFLQ
DMDDFQSWLFKTQKSVASEESPATLPEAEEQLSLHDAVREDINNHEEDYHQVRDTGTQVT
QGQEDDPQYQQLEQRLNGLDRGWVELQKMWDNRKGFLDQGLGFQQFMRDCKAVEAILNNQ
EYTLAHIDKADTSAGAEKALKKHEDFVSTMEANEDKVDGALQGGQRLVDSRNLYSGKVQD
KTDSIRDRHNKNKRRAQEVSEKLRDNRDLQHFLQNTQDLTVWINEKMLTAQDTSYDEARN
LHSKWLKHQAFMAELAFHQGWLDKRGPGGLGGKCDAALSLWIEERMPLAMSQEHGHNLQT
VQMLLKKNQTLQREIEGHQPRVEEVLERGRRMSAAASAEGRPEAERITEQLKDLEEAWAR
LQDEMTNRRERLKGSSSGQHYYNDADEAEAWIGEQELYMIADEKAKEGQELMESKPELEP
IVKERLDKLHELWDTLESTTQEKARLLFDANRSELYDQSLTDMKTWLGGLKQQLQSGEED
VKDLTKANILLKKHQMTENQVRERARELEELQEAVRKHGGGREEQPELEAEQQALQSGFQ
QLLTPLTQRRGKLEAAKAQHQFYRDLADELVSMDSYFCHVSEDYLKVTYYAKSTSSCLFD
EQSAMLMLKRHLVLKQNVDDYADSIQSLADRAQRMLAEDHPDGEEIIRRQGQVDKQYAGL
KELAEDRRLKLDHTYHHFLLSREVEYLEQWISEKDVVASSQEMGQDLDHVTRLRDKFREF
ARETGMAGQDRVDMVNETIDDLIEAGHTEAATMAEWKDAINESWADLLELIDTRSQLLTT
SYELLKYYDDGKELVAQIHDKQKELPEDVGEDFSKAESFHRMHAAFERDITALGKQVQQF
QETASRLHAQYAGSQADTIQATEREVLEAWRGLLDACDGRRAQLVDTAEKFRFFTTVRDL
MAWMESIIQQIDTQEKPRDVSSVELLQKYHQGIRSEIEARGGKFTDCIDLGKALLTRKHR
DSAEIKEKMVQLIDKRKEMMFKWDDRWDWLRLCE
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtttatattgactttcctttcccccccaggctacaagccgtgtgatcctcaggtgatc
cgggacagggtgcagcacctggacctgtgctaccaggagctctgcgcgctggcggcccag
cggagggctcgcttggagcagtcccgcctcttctggaacttcctgtgggagacggcggag
ctggagagctggatccgagagaaggagcacctcttctcctccctggattacggcaaggac
ctgacgagtgtgctggtgctgcagagcaaacacagcgccttcgaggacgagctcggggcc
cgccgtgcaaacctggaccaggtccaggccgaaggacagaagatgatcgaggccgagcac
tacggctccccgaaggtccaagaacgcatggacgacatcaggaggcagtggcagcagctg
gaggagctggctgcgttccggaaacagaacctccaggacacccagaggttcttccagttt
cagggagacgcagatgaactcaaggcctggctgctgggagcaaagaggcagatgagcagt
gacgacgtgggccacgacgagtacaccactcagaggctgctgaagaagcacagggacctg
aagaatgagacgacaaagaacggagccaccatagatgctctgtccaaacaggccaacgcg
ctgccggaggagctgcagaacacgccggacattcagagacgcctgaaagacattaaggac
ctgttcatggagctcatgtctctggccgacctgaggcagaagaagctggatgacgccatg
tccctgtacaccatcttcagtgagacagacgcctgcgagctgtggatggggcagaaggag
acgtggttggtgggtttggaagtgcctaagaaactggaggatctggaagtagtacagaat
aggttgagcattcttgctcaagatatggcaaatgttcagtcgagagttgatgacgtgaat
caagccgtgaaacagctcgaggacagcagacaccctcgcactagagaggtcaaggaatgt
cagatgcgactgaataagaggtgggaggccttcaaggccatggtggaggacaagaagagg
aaagtggattctgccgctagtctgaacaactacgggctggagtgtgacgagacagagtcc
tggatcaaagacaagactcgggtgatcgagtccacggtggacctgggcaacgacctggca
gccgtcatgaccatccagaggaagctgttcggcatggagagagatctggctgccatcgaa
aacaagctcaccttcctgaggaacgaggccgaccagctggctaaagatcacccggagagc
gctggagacatcctggcccgcagaggggagctggacgcagcctgggacgagctgaaaaag
actctgaaagacagagaggactctttgggtgaggtcagcaagttacagaccttcctccaa
gacatggacgacttccagtcctggcttttcaagacccagaagtctgtggcttcagaggaa
agtcccgccacgctgccggaggccgaggagcagctcagccttcacgacgctgtgcgagaa
gacatcaacaaccacgaggaggactatcaccaagtgagggacaccgggacgcaggtcacc
cagggccaggaggacgatcctcagtaccagcagctggagcagaggctcaacgggctggac
cgagggtgggtcgagctgcagaagatgtgggacaaccggaaaggtttcctggaccagggt
ctgggcttccagcagttcatgagggactgcaaggctgtagaggccatcctcaacaaccag
gagtacacattggcccacatagacaaggccgacacgtctgctggggcagagaaggctctg
aagaagcatgaggactttgtgagcaccatggaggccaacgaggacaaggtagacggcgct
ctgcagggcggccagcggctggtggacagcaggaacctgtactctgggaaagtgcaggat
aaaactgactcaatccgagacaggcataacaagaataagaggagagcccaggaggtgtcg
gagaagctcagagacaaccgcgacctgcagcacttcctgcaaaacacccaggatctgact
gtgtggatcaacgagaagatgctgacggctcaggacacgtcgtacgacgaggccaggaac
ctgcacagcaagtggctgaaacaccaggccttcatggctgagctggccttccaccaaggc
tggctggacaaacgtggaccaggcggcctcggcggcaagtgtgacgctgctctgtcactc
tggattgaggagaggatgcccctggcaatgtcacaggagcacggccacaatcttcaaact
gtgcaaatgctgctgaaaaagaatcagacgctgcagagggagatcgagggccaccagcct
cgagtcgaggaagtgttggagcgagggaggaggatgtcggcggccgccagcgcagagggc
cgaccggaggctgagcgaatcacagagcagctgaaggacctggaggaggcgtgggcccgc
ctccaggacgagatgaccaatcgcagagagcggctgaagggctccagctccggccagcat
tactacaacgacgcggacgaggccgaggcctggatcggagaacaggagctctacatgatc
gctgacgagaaggccaaggagggtcaggagctcatggagtccaaacctgagctggagccc
atcgtgaaggagcgtctggacaaacttcacgagctgtgggacacgctggagtccaccacc
caggagaaggctcgcctgctgttcgacgcaaaccgctccgagctttacgaccagagcctc
acggacatgaagacgtggctcgggggtctgaagcagcagctgcagagcggggaggaggac
gtcaaagacctgacgaaagccaacatcctgctcaagaagcatcagatgacggagaaccag
gtgcgtgagcgggcgcgggagctggaggagctccaggaggcggtgaggaagcacgggggg
ggcagagaggagcagccggagctggaggcggagcagcaggccctgcagagcggcttccag
cagctcctcacccctctgacgcagcgcaggggcaagctggaggccgccaaggcccagcac
cagttctacagagacctggccgacgagctcgtaagcatggactcatatttctgtcatgtc
tcggaagattatttaaaggtcacctattatgcaaaatccacttcttcatgtctcttcgac
gagcagagtgccatgctgatgctgaagcgccacttggtcctgaagcagaacgtggacgac
tacgccgactccatccagagtctggctgaccgagcccagaggatgttggctgaggaccat
cctgatggagaggagatcatcaggcgacagggtcaggtggataagcagtacgcggggctg
aaggagctggcggaggaccgcaggctgaagctggaccacacctaccaccacttcctgctg
agccgagaggtggagtacctggagcagtggatctcagagaaagacgtggtggcctcctcg
caggagatgggccaggacctggaccacgtcacgcgtctgagggataagttcagggagttt
gcgcgggagacggggatggcgggtcaggaccgagtggacatggtgaacgagacgatagac
gacctgatcgaggcgggacacaccgaggcggccaccatggcggagtggaaggacgccatc
aacgagagctgggccgacctgctggagctcatcgacacgcgctcccagctcctcaccaca
tcctacgagctgctcaagtactatgacgatggaaaggagttagtggctcagatccacgac
aagcagaaagagctgcctgaagatgtgggagaggacttcagtaaggccgagtccttccac
aggatgcacgcagccttcgagagagacatcactgctctcggcaaacaggttcaacagttc
caggagaccgcctcgcggctgcatgcccagtacgcaggcagccaggcggacaccatccag
gccacagagcgagaggtgctggaggcctggaggggcctgctggacgcctgcgatggccgc
cgcgcacagctggtcgacaccgctgagaagttccgcttcttcaccacggtgcgagacctg
atggcgtggatggagagcatcatccagcagatagacactcaggagaaacccagggatgtc
tcgtccgtggagctcctgcagaagtaccaccaggggatccgctcggagatcgaggccagg
ggaggcaaattcaccgactgcatagacctggggaaagccctgctgactcgaaagcaccga
gactctgctgagatcaaagagaagatggtgcagctgatagacaaaaggaaggagatgatg
ttcaagtgggatgacagatgggactggctcagactctgtgagtaa
DBGET
integrated database retrieval system
