Notothenia coriiceps (black rockcod): 104952305
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Entry
104952305 CDS
T04920
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104952305
Membrane trafficking [BR:
ncc04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104952305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
ATG2_CAD
DUF5764
Motif
Other DBs
NCBI-GeneID:
104952305
NCBI-ProteinID:
XP_010777403
UniProt:
A0A6I9NR05
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDCSQLKLAIWGGDAVLRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKQKAAEQENPDVEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTCDEKWNPRLLDENSRLFFKLVQLDNLFAYWNVDSLLFSNHNAEEALQCLQSSID
AQNSLSISHDFIFRPISAAAKLRMNPRSDVDFSSPKVDLMVHLSEVAIELNRPQYISILG
LLGSVDLMSRNLPYRKYRPEVQVHRNACIWWKYMITSVLEVDVKPRLQMWSWQHIRIHRQ
TIKCYRELYKNKITCKKPNEDLLKALKGTEKTLDIFNITLARQQAEVEASKAGLRIFRPG
LKMEEEESQGWLSWMWNMGGEAESETKEVKTGGFDELLTYAEKSKLYTAIGYSDTAANPN
LPKNFEDMKVYFHMERLSVSITDNKDKDEIIRLTVGELKSTLTQRPGAQAIKLHSPAQLV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcttggtggttgatgtcctcaaccgatttttaggggactacgttgtc
aaccttgactgctcacagctaaagcttgccatatggggaggtgatgctgttcttagaaat
cttgaaataaaggaaaatgccttgagtcaacttgacattccttttaaagtgagagccggt
catataggacggcttgagctaaagatcccatggaagaacctgtacacacagtctgtagag
gcaacactggatggggtctatctactcatagtccccacagcaagcataaagtatgatgca
gaaaaggaggagaagcagctacaggaggctcgtcagagggagctacagcggatagaggag
acaaagcagaaggctgctgagcaagagaatccagatgttgaaaaacaggacacctttgtg
gagaagctggtcactcaggtcatcaaaaacctgcaagttaagatctctaacatccatgtg
cgctatgaagatgatgtcaccaatccaaactgccccttgtcatttggagtgtcacttaaa
aacctcagtcttcagacatgtgatgagaaatggaatcccagacttttggatgagaattcc
cgacttttcttcaagttggttcaactagacaacttgtttgcctactggaatgtcgactct
ttactcttctccaatcacaatgcagaggaagccttgcaatgtctgcagagcagcatcgac
gcacagaactctctttcaatcagccatgacttcatttttcgtcctatctcagcggccgct
aaactgcggatgaatcccaggtcagatgtggacttttcctctcctaaagtggacctgatg
gtccatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcctgggg
ctgctgggctcagtggatttgatgtctcgcaatctcccgtacaggaagtacagacccgag
gtccaggttcacagaaatgcctgcatatggtggaagtacatgatcacaagcgtcctggag
gtggatgtcaaacctcgtctccagatgtggtcctggcagcacattcgcattcaccggcag
acgatcaagtgttacagagagctgtacaagaacaaaatcacctgcaagaaacccaacgag
gacctgctcaaggcactcaaggggactgagaagaccttggatatttttaacatcacgttg
gccagacagcaggcggaggtggaggcaagcaaagcaggtctacgaattttccgtccaggg
cttaagatggaggaggaggagtctcagggctggttgagctggatgtggaatatgggagga
gaggccgaatcagaaacaaaagaggtcaagactggaggttttgatgagctgttaacctac
gctgagaaatccaaactctacactgccatcggatacagtgacaccgctgcaaatcccaac
ctgccaaagaattttgaggacatgaaggtctatttccacatggagaggctgtctgtgtcc
atcactgacaacaaggacaaagatgagatcatcaggctgactgtgggagagctcaagtcc
acactcactcagagacctggagcgcaagccatcaaactccacagcccagctcagcttgtt
tga
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