Notothenia coriiceps (black rockcod): 104952504
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Entry
104952504 CDS
T04920
Symbol
colgalt1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00310
Lysine degradation
ncc00514
Other types of O-glycan biosynthesis
ncc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104952504 (colgalt1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104952504 (colgalt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104952504 (colgalt1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
104952504 (colgalt1)
Glycosyltransferases [BR:
ncc01003
]
O-Glycan biosynthesis
O-linked Gal type
104952504 (colgalt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
104952504
NCBI-ProteinID:
XP_010777643
UniProt:
A0A6I9NRU2
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MPGLAWLPAAVLLLLSGCSPARGYFAEERWSPESELLAPRVLVALICRNSEHSLPYFLGN
IERLNYPKDRMALWVATDHNKDNTTGILRDWLVKMQKLYHYVEWRPKEEPQGYRDEDGPK
QWTDLRYEHVMKLRQAALVSAREMWADYFMLADCDNLLTNPDMLWKLMGENKTIIAPMLE
SRAAYSNFWCAMTSQGYYKRTPAYLPIRKHVRKGCFAVPMVHSTFLIDLRKEASRQLAFH
PPHPEYSWAFDDIIVFAFSARMADVQMFVCNKETYGNLPVPLRSHNTLQDEADSFLHSLL
EVNVRNPPVMPSKYVPVPTKQPDKLGFDEVFMINLPRRTDRRERMMSTLYEQKIKCKVIA
AVDGKGMNISEVHNLGIHMLPGYNDPYHNRPLTKGELGCFLSHYNIWKEIVERRLETSLV
IEDDLRFEIFFKRRLMNLMKEVEDEGLDWDLIYIGRKRMQVDRPEKAVPNIHNLVEADYS
YWTLGYMMSLQGAEKLLKAEPLKRILPVDEFLPIMFNKHPVFDYMKQFETRDLKAFSAEP
LLVYPTHYTGDSGYISDTETSTVWDNDKVRTDWDRGRAGKTGEQAEISTEAQNSDVLQSP
LDSAAREEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccggggctcgcctggctccccgccgccgtgctcctgctgctgtccggctgctctccg
gctcgcggatacttcgctgaggagcgctggagccccgagtctgagctcctcgcgccacgg
gtcctcgtcgccctcatctgcaggaactccgagcactctctgccgtatttcctcggtaat
attgagcgccttaactatcccaaggaccgtatggctttgtgggtggcaactgatcataac
aaggacaacaccaccggcattctgcgggactggcttgtgaagatgcagaaactttaccat
tatgtggagtggaggccaaaagaggaaccccaaggttatcgtgatgaggatggtccgaaa
caatggacagacctccgttatgagcatgttatgaaacttcggcaagcagcgctggtgtcg
gctcgtgagatgtgggcagactacttcatgctggcagactgtgataacctcctcaccaat
cctgacatgctctggaagctcatgggagagaacaagaccatcattgctccaatgctcgaa
tcccgtgcagcctattcaaacttctggtgtgcaatgacctcccagggttactataagcgc
actcctgcatacttacccataagaaagcatgtgcgcaagggctgttttgcagttccaatg
gtccactccaccttcctgatagacctcaggaaagaggcgtccaggcagctggcctttcac
ccgccacacccagaatacagttgggcttttgacgacatcattgtgtttgcgttctccgct
cggatggcagatgttcaaatgtttgtgtgtaacaaagagacctatggtaacctccctgtg
cctctgcgatcccacaatactttgcaagacgaagccgacagcttcttgcactccctgctg
gaggttaatgtgcgaaatcccccagtgatgccttccaaatacgtccctgttcctacaaaa
caacctgacaaactgggcttcgatgaggtgttcatgatcaacctgccgaggcgcactgac
cgccgagaacgtatgatgagtacgttatatgagcagaagataaaatgcaaggtcattgca
gctgttgatggaaaagggatgaatatcagtgaagttcataatttaggcatccacatgctc
cctggatacaatgacccctaccataaccgcccactgacaaagggagagctgggctgcttc
ctatcccactacaacatctggaaagagattgtggagcgacgactggaaacctccctggtg
attgaagatgacctgcgctttgagatcttcttcaaacggcgcttgatgaacttgatgaag
gaggtggaggatgaagggctggactgggatctcatttatattggtcggaaaagaatgcag
gtggatcgcccagagaaagcagtgcctaatattcacaacttagtggaagcagattattca
tattggactctaggctatatgatgtcattacaaggggcggagaagcttttgaaagcagaa
cccctgaagcggattttgccagtggacgagtttctgcccatcatgttcaataaacaccct
gtgtttgattatatgaaacagtttgaaaccagggacctaaaagcattttctgccgagcct
cttctagtgtatccaacacattacacaggcgacagcggctatatcagcgacacagagacc
tccacagtgtgggacaatgacaaggtccgtactgactgggacagagggcgcgcaggaaag
actggggagcaggctgagatcagcactgaggcccagaactcagatgtgctccagtcgcct
ttggacagtgcggcacgggaggagctatga
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