Notothenia coriiceps (black rockcod): 104952546
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Entry
104952546 CDS
T04920
Symbol
hnrnpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104952546 (hnrnpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104952546 (hnrnpa1)
03041 Spliceosome [BR:
ncc03041
]
104952546 (hnrnpa1)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104952546 (hnrnpa1)
mRNA cycle factors
Common to processing body (P body) and stress granule
104952546 (hnrnpa1)
Spliceosome [BR:
ncc03041
]
Common components
Common spliceosomal components
hnRNP proteins
104952546 (hnrnpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
104952546
NCBI-ProteinID:
XP_010777684
UniProt:
A0A6I9NJ78
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MSKDVPREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPNSKRSRGFGFVT
YSSVDEVDAAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHL
RDYFSQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKAL
TRQEMQTAGMGRSSSGGGGGGRPYDYDRGFSPSGRGRYGDGPYNSNGGGGGGANDGGGGG
SGGGYGGGPGGYNNGGNRGYNQGGYNQGGGGGGGGGGGGGGGGGYGGNGYESNGYGNCGG
GGGGSSGGGGGGGNNYNNMGNYDPQASNFGPMKNNFGGGGGGGSVGGGGGGGRSFGGGYG
GGSNNGGGYGRSARF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagatgtaccacgcgagccagagcagcttcgtaagctgtttattggaggtctg
agcttcgagactacagatgaaagcctgagggctcattttgagcaatgggggagccttaca
gactgtgtggtcatgagggaccccaattccaaaaggtccaggggctttggctttgttaca
tactcctctgttgatgaggttgatgctgcaatgactgcccgcccccacaaggttgatggg
agagtggttgaacccaaacgggctgtttccagagaggactcaaaccgaccaggagcccat
gtgaccgtaaaaaagatatttgttggtggcatcaaagaagacacagaggagtcccacctg
agagattacttttctcagtttggcaaaatcgaggtcattgatatcatgaccgaccgtaac
tctggaaagaagaggggctttgcctttgtgacgtttgatgatcatgattcagtcgacagg
attgttatccaaaaataccacactatcaactctcacaactgtgaagtgaggaaggctctc
acgaggcaagagatgcagacagcaggaatgggtcgtagcagcagtggaggaggcggaggt
ggaaggccctatgactatgacagaggcttcagcccgagtggtaggggtcgctatggtgat
ggtccttacaattccaatggtggtggtggtggtggtgccaacgatggtggtggcggcggc
agtgggggtggatatggaggtgggccaggcggatacaacaatggtggaaaccgagggtat
aaccaaggaggttacaaccaaggtggtggtggcggcggcggcggtggaggaggtggtggc
ggaggcggtggctatggaggaaatggttatgagagcaatggctatggtaactgtggtggt
ggtggtggtggtagtagcggaggtggaggaggtggcggtaataattacaacaatatgggc
aactacgacccccaggcctccaactttggcccaatgaaaaacaactttggtggtggcggt
ggcggcggcagtgttggaggaggaggaggaggaggaaggagctttggtggtggctatgga
ggtggctcaaacaacggtggtggatatggtcgttcggcacgattctga
DBGET
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