Notothenia coriiceps (black rockcod): 104952676
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Entry
104952676 CDS
T04920
Name
(RefSeq) far upstream element-binding protein 2-like isoform X1
KO
K13210
far upstream element-binding protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104952676
03041 Spliceosome [BR:
ncc03041
]
104952676
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104952676
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104952676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
FUBP_C
KH_KhpA-B
KH_Vigilin
KH_PNO1_2nd
KH_NusA_2nd
Motif
Other DBs
NCBI-GeneID:
104952676
NCBI-ProteinID:
XP_010777843
UniProt:
A0A6I9NSE8
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSDYGGLPTNGVGAGMKNDAFADAVQRARQIAAKIGGDGVPSVSNNGGTENYPFTSQKRS
LEEADEPDAKKVASQGEIDSALSIGAQLAALSQQSVRSSTMTEEFRVPDGMVGLIIGRGG
EQINKIQQDSGCKVQIAHDSAGLPDRSVSLTGSPDAIQRAKALIDDIVSRGHEGATNGQS
GGGGGGGGGGGGGGGGGGGGGGGGGGGSMQEMIIPAGKAGLIIGKGGETIKQLQERAGVK
MILIQDGSQPPNIDKPLRIIGDPYKVQQAKDMVNEILRERDNAGFGDRSEFGSRMGGGGG
GGGGGGGGGGGGGGGGIGSGGGGIDIAVPRHSVGVVIGRSGEMIKKIQSDAGVKIQFKPD
DGTGSDKIAHIMGPPDQCQHAASIITELLQSIRAREEGGQGGPPGEGMPSGGRGRGRAQG
NWGPPGGEMTFSIPAHKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFIIR
GSPQQIDHAKQLIEEKIEAPLCPVGGGPGGPGGPGGPGGPGGPMGHFNPNPYNAGPPGGA
PHGAAPGGAQYCPQGWGGNYQQWQAPGQHDPNKAAADPNAAWAAYYAQYYGQQPGGAMAG
QSPGAPAAAAPGDQGQGQQASGGQPDYTKAWEEYYKKMGMTQPAGGAAAAPGPAAAAAAA
AAAAGGGAAGGQQDYSAAWAEYYRQQAAYYGQPGQGPGQGGAPQQGQQTQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacggcggtctgccgactaacggagtcggtgctgggatgaaaaacgacgct
tttgctgatgcagtacaacgagccagacagattgcagctaaaattggtggagacggtgtt
ccttcagtgagcaacaacggaggaactgagaactatccattcacatcacagaaacgatcc
ctggaagaagcagatgaacccgatgccaagaaggtagcatcacagggtgaaattgattct
gcattgtctattggagctcagctggctgccctgtcccaacaaagtgtccggtcctccaca
atgacagaagagttcagagtgcctgatgggatggtggggctcatcatcggccgagggggc
gaacagattaacaaaatacagcaggattctggctgcaaggtccagatcgcgcacgacagt
gccggtcttccagatagaagtgtttctctgacggggtctccagatgccatacagagagcc
aaggccctcatagatgacattgtgtcgaggggtcatgagggtgcgaccaatgggcagtcg
ggaggaggaggaggaggaggtggtggtggtggtggaggaggaggtggtggtggtggagga
ggaggaggaggagggggaggttccatgcaggagatgatcatccctgcaggcaaggccggc
ctcatcatcggtaaaggaggagagaccatcaaacagcttcaggagcgggctggagttaag
atgattcttattcaagacggatcccagccacccaacatagataagcccctgcgcatcatt
ggagacccctacaaagtgcagcaagcaaaggacatggtgaatgagattctacgagagagg
gataatgccggatttggagaccggagcgaatttggatcaaggatgggaggaggaggtggt
ggtggaggaggaggtggtggtggtggaggaggaggaggaggaggcggcatcggcagcggc
ggtggtggcattgatatagctgtgccccgccactctgtgggagttgtaattggccgaagt
ggggagatgatcaagaagatccagagcgatgctggagtgaagattcagtttaaaccagat
gatggaaccggttctgataaaatagcccatattatgggtccaccagaccagtgtcagcat
gctgcatcgatcatcactgaactgctacagagcatccgtgcgcgagaggagggcgggcag
gggggcccccccggtgaagggatgccatccggtgggcggggacgaggcagagcccagggc
aactggggccctccgggaggagagatgaccttctccattcctgcgcacaaatgtgggctt
gtcattggcagaggaggagagaatgtgaagtccatcaaccaacagaccggtgcgtttgtg
gagatctctcgtcagccgccaccaaacggtgaccccaacttcaaactgtttatcatccga
gggtccccacaacagattgaccatgccaagcagcttatagaagagaagattgaggctcca
ttgtgtcctgtgggcggtggtcctggtggtcctggtggtccaggtggcccgggaggccca
ggtggtcctatgggtcactttaatccaaacccttataatgcagggcctccaggtggtgct
ccacatggagccgcacctggtggagcccagtactgtccacagggttggggaggtaactac
cagcagtggcaagcccctggtcaacatgaccccaataaggcagcagcagatcctaacgca
gcatgggcagcatactatgcacaatattatggccaacagccagggggtgccatggcaggc
cagagcccaggagcccctgctgcagcagcaccaggggaccagggccagggacagcaggct
tctggtggccagccagactatactaaagcctgggaggagtactacaagaagatgggcatg
acccagccagctggaggggctgcagctgctccgggcccggcagcagcggcggcggcggcg
gcagcagcagcaggcgggggtgcagctggaggccagcaggattacagtgcagcctgggcc
gagtactacagacagcaggctgcctactatggacagccagggcaggggcctggacagggc
ggtgctccacagcagggacaacagacccagtaa
DBGET
integrated database retrieval system
