Notothenia coriiceps (black rockcod): 104952680
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Entry
104952680 CDS
T04920
Name
(RefSeq) neurexin-1-like
KO
K07377
neurexin
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104952680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104952680
Membrane trafficking [BR:
ncc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
104952680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
104952680
NCBI-ProteinID:
XP_010777852
UniProt:
A0A6I9NMR6
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MMVLQKPHSAHIIWAGLLILCFAEIGTSLEFTDAEGQWARFPVWNACCESEMSFNMKTKS
SHGLLVYFDDEGFCDFLELLILNGKLSLRFSIFCAEPATVVSDTAVNDSQWHAVTIRRNF
KNTTLKVDNETKWVEVKSKRRDMTVFSHLFVGGIPPELRSEALRLTSSTVKDQLPFTGWI
TDIKVNNTESVMINSDGVLKDLCGLANICLNGGICSLINNEPTCDCSRTGFQGKDCSEVL
PEDTNNEGLAHLMMGDQGKSKGKEEHVATFKGSEFFCYDLSLNPIQSSSDEITLSFRTLQ
RNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWHDVKVTRNL
RQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMG
CLKEVVYKNNDVRLELSRMAKQGDPKMKVHGTVAFKCENVATLDPITFETPESFIVLNKW
NAKKTGSISFDFRTTEPNGLLLFSHGKPKQPPKDSKNPQILKVDFFAIEMLDGHLYLLLD
MGSGTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGESEILDLDENLYL
GGLPENKMGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRRLAEVQKAAGVKPSCSKE
PPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCEREATILSYDGSKFMKVQLPVVM
HTEAEDVSLRFRSQRAYGILIATTSRDSADTLRLELESGRVRLTVNLDCIRINCTSSKGP
ETIFAGQNVNDNEWHTVRVFRRGKSLKLTVDDLQPVEGQMAGDHTQLEFHNIETGIVTEK
RFMSMVPSNFIGHLQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNIIADPVTFKSRSSY
VTLTTLQAYYSMHLFFQFKTTSSDGLVLFNSGDGNDFIVVELVKGYLHYVSDLGNGAHLI
KGNSNKPLNDNHWHNVIISRDTNNLHMVKIDTKITTQTTSGAKNLDLKGNLYIGGVAKEM
YKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDALDCVGQIERGCEGPSTTCQEDSCANQ
GVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPNDRPSTRADRLAIG
FSTQLKDAVLVRVDSSSGLGDFLKLHIGKGNTAVRVIRVALMKMQHLAQCVIGLRHQDPI
DAAMYFMPSPLYCLSFQTTDDLLVASAECPSDDEDIDPCEPSSGGLANPTGPGLKGYPGT
QEVFRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNG
TVVKEKPVNTAKTSNKSKKNKDKEYYV
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgatggttttacaaaagccacatagtgcccatatcatatgggctgggctgctcattttg
tgctttgcagaaataggcacttctctagaatttacagatgctgaaggccagtgggccaga
tttccagtatggaatgcatgttgcgaaagcgaaatgagcttcaatatgaagacaaagagt
tcccatgggctgcttgtgtacttcgacgatgaggggttctgcgactttttagaacttctc
atactgaacggtaaactcagccttcgtttttcaatcttctgtgccgagcctgcaaccgtc
gtatctgacacggcggtcaatgacagccaatggcacgcagtcacgataaggagaaacttt
aagaacacgaccctaaaggtagacaatgagacaaaatgggtcgaggtgaagtccaaaaga
cgggatatgactgttttcagccatttgtttgttggtggaataccaccggaattacgatcc
gaggcgttacggctcacatcatctacagtcaaggatcagctacctttcactggttggata
acagacataaaggtcaacaacacggagtctgtcatgattaacagtgacggggtcttgaag
gacctctgtggactggccaacatttgcttaaatggaggaatctgcagtctaattaacaac
gaaccaacatgtgactgctcacggacggggttccaaggaaaggactgcagtgaagtgctt
ccagaagacaccaataatgaaggtctggcacatctgatgatgggcgaccaaggtaaaagt
aaaggaaaagaagagcatgtcgccaccttcaaaggatctgagttcttctgctacgacttg
tccttgaacccgattcaaagcagcagtgatgaaatcacgttgtcattcagaaccctgcag
aggaatggactgatgctgcacacgggcaaatcagctgattacgtcaacctggccctgaaa
aatggggctgtctcactcgtcattaatttggggtctggagcctttgaagctcttgtggag
ccagtcaatgggaaatttaatgacaatgattggcatgatgtcaaagtaacaaggaatcta
cgtcagcactcaggcattggacacgctatggtgacaatatccgtggatgggattctgacc
accacgggatatacacaggaagactacaccatgctaggctctgacgacttcttctatgtt
ggagggagtcctagcacagctgacctgcctggatctccagtcagcaacaacttcatggga
tgcctcaaggaggttgtgtacaaaaacaatgatgtgaggcttgagctgtccaggatggcg
aagcagggtgatcccaagatgaaggtccatggtactgtggcgttcaagtgcgagaatgtg
gccactctggaccccatcacattcgagacgccagagtcctttattgtcctcaataagtgg
aacgctaaaaagacgggctccatctccttcgacttccgcaccacagagcccaacggcctt
ctcctcttcagccacggcaagcccaaacagccgccgaaggattccaagaatccccagatt
ctcaaggtggacttcttcgccattgagatgctggatggccacctgtacctgctgctggac
atgggctcagggaccaccaagacaagggcagtcaataaaaaggtcaatgacggcgagtgg
taccatgtggacttccagcgagatggcagatcaggtaccatttctatcaacaccctccgt
actgcctacacagcccctggagaaagtgagatcctggacttggatgagaatctctacctc
gggggtctgccagagaacaaaatggggctggtgttccccactgaggtgtggacagcacta
ctgaactacggctacgtgggctgcatccgggatctattcattgacggacagagtaaggat
atccggcgcctggccgaggtccagaaggcagccggggtcaagccctcctgctccaaggag
cctcccaaacagtgtttgagcaacccttgccaaaacaatggggtctgtagagagggctgg
aaccgctatgtgtgcgactgctctgggactggatacctgggacgctcctgtgaaagagag
gcgaccatcctcagctacgacggcagcaagtttatgaaggtccagctgccagtggtgatg
cacacagaagccgaggacgtgtctctgcgcttccgatcccagcgagcctatggcatccta
atagccaccacatctcgggactctgctgacaccctgcgtctggagctggagagcggccgg
gtccgcctgactgtcaacttagattgtatcaggattaactgtacctccagcaaaggccca
gagactatttttgcgggtcagaatgtgaacgataatgagtggcacacagtgcgtgtgttc
aggaggggcaagagtttgaaactgaccgtagatgatctgcagcctgtggaaggtcaaatg
gcaggcgaccacacccagctggagttccacaacattgagacgggcattgtgacagagaag
cgcttcatgtccatggtgccgtccaacttcattggccacctccagagcctctcctttaac
ggcatggcctacatagacctctgtaaaaacggtgacattgattactgtgagctcaacgcc
atgattggcttcaagaacatcatcgccgaccccgtgaccttcaagtcgcgctcaagctac
gtgaccctcaccactctgcaggcctactactccatgcaccttttctttcagttcaaaacc
acctcctccgacggcctcgtcctgtttaacagcggcgacggaaacgacttcatcgtggtg
gagctggtcaaaggttacctgcactatgtgtctgacctgggaaatggagcccacttgatc
aaaggcaactccaacaagcccctcaacgacaaccactggcacaatgtcatcatctccagg
gacaccaacaacctccacatggtcaagattgataccaagatcaccacgcagacaacctca
ggagccaaaaatctggacctgaagggtaacctttatattggcggggtggctaaggagatg
tacaaggagctgcccaaactggtgcacgccaaggagggtttccaaggctgtctggcgtcg
gtggatctgaacgggcggctcccggacctgatgtcagacgctctggactgcgtgggtcag
atagagagaggatgtgaagggcccagcactacgtgccaggaggactcgtgtgccaaccag
ggagtgtgtctgcagcagtgggagggcttcagctgtgactgcagcatgacaacattcgga
gggccgctgtgtaatgatgcgggaacaacgtacatatttgggcgagatggcggactgatc
acgtacacgtggccgccaaatgatcgtcccagcacaagggcagaccgtctggccatcggc
ttcagcacacagctgaaggatgctgtcctggtgagggtggacagctcctctggtctcgga
gacttcctcaaactccacatcggtaaaggaaacactgctgtaagagtcatccgcgtggcc
ttaatgaaaatgcaacacttagcacagtgcgtgattgggctcaggcaccaagaccccatt
gatgcagcaatgtatttcatgccctcaccactctactgcctctcttttcagacaaccgac
gacttgctggtggcatccgccgagtgtccaagcgatgatgaggacattgatccctgtgag
ccgagctcaggtgggttagccaatcccaccggccctgggctgaagggctaccccggcacg
caggaggtcttccgggagtccagcagcacgacgggcatggtggtgggcatcgtagcagca
gcagcgctatgcatcctcatcctgctctacgccatgtacaaataccggaacagagacgaa
ggttcgtaccacgtggacgagagtcgcaactacatcagcaactcggcgcagtccaacggc
accgtggtcaaagagaaaccagtgaacaccgcaaaaacctcaaacaagagtaagaagaat
aaggacaaggagtactacgtgtga
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