Notothenia coriiceps (black rockcod): 104952722
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Entry
104952722 CDS
T04920
Symbol
yars
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104952722 (yars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncc01007
]
104952722 (yars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104952722 (yars)
03029 Mitochondrial biogenesis [BR:
ncc03029
]
104952722 (yars)
Enzymes [BR:
ncc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
104952722 (yars)
Amino acid related enzymes [BR:
ncc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
104952722 (yars)
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104952722 (yars)
Prokaryotic type
104952722 (yars)
Mitochondrial biogenesis [BR:
ncc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
104952722 (yars)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
104952722
NCBI-ProteinID:
XP_010777888
UniProt:
A0A6I9NSJ6
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MAGQLSQDEKLQLITRNLQEVLGEEKLKHVLQEREVKVYWGTATTGKPHIAYFVPMSKIA
DFLKAGCEVTILFADLHAFLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG
TDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVDHPLLSGLLYPGLQALDEEYLKCD
AQFGGVDQRKIFTLAEKYLPSLGYAKRSHLMNRMVPGLTGAKMSSSEEESKIDLLDSAGD
VKKKLKRAFCEPGNIENNGVLSFVQYVVFPLRGEFSIKRDPKWGGDKTYTVFEELEKDFA
AESVHPGDLKASVEVSLNQLLDPIRKKFESPELRKLSNTAYPSKTKAAGKGAKAGAGGGG
GGGGGDDDDLSPSRVDIRVGRIISVEKHPDADSLYLEKIDVGEAEPRTVVSGLVAFVSQE
ELQDRLVLVLCNLKPQKMRGIESQAMLLCASIEGEPRRVEPLDPPEGSSPGDRVFVEGYE
TGEPDERLNPKKKVWEKVQADLKISDECVAQWKDNQLMTKLGQITCKTLKGGNIS
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcagctcagtcaggatgagaagctccagctcattaccaggaacctccaggag
gtcctgggagaggagaagctgaagcatgtcctgcaggagagagaggtgaaggtgtactgg
ggaacagcgaccactgggaaaccccacatagcttactttgtccccatgtccaagatagca
gacttcctcaaggcgggatgtgaggtcaccattctgtttgcagacctgcatgccttcctg
gacaacatgaaggccccctgggagctgctggagctcagggtgaagtactacgagcaggtg
atcaaggccatgctggagagtatcggcgtgcctctggataaactcaagttcgtcaaagga
accgacttccagctcagcagagagtacactctggacgtgtaccgcctgtcctccatggtg
acggagcacgatgctaagaaggccggagcggaggtcgtgaagcaggtggatcatccgctg
ctgagcggcctgctctaccctggactgcaggctctggatgaggagtacctaaagtgcgac
gcccagtttggaggcgttgaccagaggaagattttcactctggcagagaagtacctaccc
tctctgggctacgctaagcgctcccacctgatgaaccggatggtacctggccttacgggc
gccaagatgagctcctcagaggaagagtcaaagatcgatctgctggactcggctggagac
gtgaagaagaagctgaagagagctttctgtgagccgggaaacatcgagaacaacggagtc
ctctccttcgtccaatatgtcgtcttccctctgcgcggagagttctccatcaaaagagac
cccaagtggggcggagacaaaacctacactgtgtttgaagagctggaaaaggactttgca
gcggagtcggtgcatccaggagacctgaaggcctccgtggaggtgtcactgaaccagctg
ctggacccaatcagaaagaagtttgagtccccggagctgcgtaaactctccaacaccgcc
tacccctcaaagacgaaagcagcagggaaaggtgccaaggcaggagcaggaggaggagga
ggaggaggagggggagatgatgatgatctgtccccctccagagtggacatcagggtgggc
aggatcatcagtgtggagaagcacccggatgctgattcgctgtacctggagaagatcgat
gtgggggaggcggagccgaggacggtggtgagcggcttggtggcgtttgtctctcaggag
gagctgcaggacaggctggtgctggtgctctgcaacctgaagccccagaagatgagaggc
atcgagtctcaggccatgctgctgtgtgcctccattgaaggggagcccaggagggtggag
cctctcgaccctccagaggggtcgtcgcctggagaccgggtcttcgttgagggatacgag
acgggagaaccagacgagagactcaacccaaagaagaaagtgtgggagaaagtacaggct
gatctgaagatatcagacgagtgtgtagctcagtggaaagacaaccagctgatgactaaa
ctgggacagatcacatgtaaaacactcaaaggaggaaacatcagctag
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