Notothenia coriiceps (black rockcod): 104952755
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Entry
104952755 CDS
T04920
Symbol
slc27a1
Name
(RefSeq) long-chain fatty acid transport protein 1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03320
PPAR signaling pathway
ncc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
104952755 (slc27a1)
09158 Development and regeneration
04382 Cornified envelope formation
104952755 (slc27a1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ncc01004
]
104952755 (slc27a1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104952755 (slc27a1)
Lipid biosynthesis proteins [BR:
ncc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
104952755 (slc27a1)
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
104952755 (slc27a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
104952755
NCBI-ProteinID:
XP_010777933
UniProt:
A0A6I9NSN9
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MHLLSGVTACLSVFWDVRLLSLPWLCSLLAGLGLCLVWRGSWKFIYIAMCTIKRDLMCLV
VILRVRYSMYRNLRNRSTIPALFARMVTQHPDKPALIYEATGEVWSFRDLQERCHAVAHW
ALAQGWAEGDVVALYMESQPSVVALWLGLAMVGVEAALINHNLRLHSLLHCVGVSGARAI
VFGTEMREAVLEVRGSLQPHMVLFSSGEQVDEEELCGAQSLDALLEGFPKHPPRYTLRKD
FNDKLFYIYTSGTTGMPKAAVVVHSRYFRIAAFGFHSFGLRHDDVLYNCLPLYHSAGTIM
GVGQCLLFGLTVVIRRKFSASRFWEDCVKHNCTVIQYIGEICRYLLAQKVRSSEAHHRVR
VAIGNGLRPTVWEEFVKRFRIRRVGEFYGATECNCSLLNIDGQVGACGFNSRILPSFYPI
RLIRMQEVNGELLRDSQGLCIPCLPGELGMLVGRITDTDPLRRFDGYVDEESTNKKIAHN
VFKMGDSAYVSGDMLVMDEYGYIYFRDRSGDTFRWRGENVSTTEVEGVLSRLLGHTAVAV
YGAAVPGVEGKAGMAAIAHTGGQFDLDAFFIAVQKALPPYARPVFLRLMPSVDTTGTFKI
QKTRLQKEGYKPQDESEKMYFLNSRAGCYEAVTEELYNSIMEGTVCL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgagtggtgtaacagcgtgtctcagtgtgttttgggatgtcagactgctc
tccctcccctggctgtgcagccttttggcagggctggggctgtgcttggtctggaggggc
tcctggaagttcatatatatagctatgtgcaccatcaaaagagacctaatgtgtctggtt
gtgatactgcgagtgaggtattccatgtaccgtaatctgcgaaatagaagcaccatccct
gccctttttgcacggatggttacacagcacccagacaaacctgctttgatctatgaggct
acaggagaggtttggagtttcagggacctgcaggagcggtgccatgctgtggctcactgg
gccctggcccaagggtgggcagagggagacgtggtagccctgtacatggagagccagcct
tcagtggtggctctatggttgggtctggctatggtcggcgtagaggccgctctcataaac
cacaacctccgactgcactcgctgctgcactgtgttggcgtgtctggtgctcgggcaata
gtattcgggacagagatgagagaagcggtgttggaggtgcgggggtctctgcagccccac
atggttttgttcagcagtggtgagcaggtcgatgaagaggagctgtgcggcgctcagagc
ctggacgccctgctggagggttttcccaaacacccgccccgctacacactcaggaaggac
ttcaacgacaaacttttttacatctacacttctggtacaacaggaatgcctaaggctgct
gtggtggtgcacagtcggtattttcgcatcgctgcctttggtttccactcatttggctta
cgtcatgatgatgtcctctacaactgccttcccctgtatcactctgcaggtaccatcatg
ggtgtcggccagtgtttgctttttggtttgaccgttgtaatcagaagaaagttctcagcc
agtcgcttctgggaggactgtgtcaaacacaactgcactgtaattcaatacataggcgag
atttgtcgttacctgttggcccaaaaggtccgttcatcagaggcacatcaccgggtgcgt
gttgccatcggtaatggcctccgtcctactgtgtgggaggagtttgtcaagagattcaga
atcaggcgagttggggaattttacggcgccacagagtgcaactgcagcctcctgaacata
gacggacaggtgggggcgtgcggcttcaacagtcgcatcctcccgagcttttaccccatc
aggctgatcaggatgcaggaggtgaacggagagctgctcagggattcacaaggactctgt
attccatgtctgcctggtgagctgggcatgttagtgggacggatcaccgacactgatcct
ctccggaggtttgacggctatgtggatgaggagtccaccaataagaaaatagctcacaat
gtcttcaagatgggggattctgcttatgtctcaggtgacatgctggtgatggatgaatac
ggctacatatatttcagggaccgcagcggcgacacatttcgttggcgaggggagaacgtt
tccaccacagaggtggagggggtcctcagccgcctgctgggacacactgctgtagccgtc
tatggagctgctgtaccaggagtggaggggaaggctggtatggcagcaatagcacacaca
ggaggccagtttgacctcgatgcgttcttcatcgctgtacagaaagccctgccgccctac
gcacggcccgtcttcctgcgacttatgccatctgttgacactacaggtacctttaaaatc
cagaaaacccggctgcagaaggaaggttacaagccacaagacgagagtgagaagatgtat
tttctgaacagtcgggctgggtgctacgaggctgttactgaggaactatataactccatc
atggaggggacggtgtgtctatga
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