Notothenia coriiceps (black rockcod): 104952788
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Entry
104952788 CDS
T04920
Symbol
zeb1
Name
(RefSeq) zinc finger E-box-binding homeobox 1
KO
K09299
zinc finger homeobox protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104952788 (zeb1)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
104952788 (zeb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-met
zf-H2C2_5
zf-C2H2_6
zf-C2H2_16
Zn_SUZ12
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104952788
NCBI-ProteinID:
XP_010777991
UniProt:
A0A6I9NU41
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
SVSPFTVKEDCVSDAEDDGSTDALMEEMLQQGDTAVIYPEAPEDEPQRQGTPDASVHDEN
GTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFNCPECSYSFAYRAQLERHMT
VHKGGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHS
GSYSSHISSKKCISVISVNGRARLGNAKTQTQAPSPGLPTSPSALRTQMQKMEHSKPLQE
QLPLNQIKTEPVDYEYKPTLMTSAAMAAMNGGVFHGGTAPLQGTVQAVVLPTMGLMSPIS
INLADLQNALKVAVDGNVIRQVLESNAKGQLQMHSGLTTGMLHPTQQQLISAISLPIVGQ
DGNTKIIINYSLDPNQGQLTAHNMKKEPEATSLGQKLPEDLTIKGSRLNETKEKEEKTTK
TCLLCDNCPGGLESLHALKHCKDGLRLNGLDKSESAVAALLSEGGLCNQPKNLLSLLKAV
ALKAEPTKDELAKISDSVSLPAHVVKKWFDKMQEGQISLGAPTPPSEEEDTCEANSVVSL
VQGKDTCPSVTQDSPTEATPAEFNGAHSSPASPSPLNLTAGGPVPSQPSQSTEGPLDLSL
PKPAGGGPERAVGKACVNASPSLRSTHVDEPLNLTCTKKEASPLLAMGASHIALYASQQS
AKPLNIVTTMQCLRALSTNNKQTILIPQLAYTYTTTANSPAGTQTQETLHLNGIKEEKMD
PGSDGMSTVEEQNDSDSGPQRKKMKKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRPH
ECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKETPG
QGEGRESPENEAEARAEMEALSRLQQLLAPSQLDLDERGSSTRDEEESEEEEDGAVDMDD
IQVVEIGDEGGDEDEEERNEERVLVEGGGDEEKTEMEVAEEEEEEDTRQAEVLGSIQEEE
EVEMQEEEAMDTEEGVTEEGKEGEQVTEESGGEKDSETVSEEQKETPEEEGD
NT seq
3041 nt
NT seq
+upstream
nt +downstream
nt
tgtctgtttcacccttcacagtgaaggaggattgtgtttcggacgctgaggatgatggga
gcacggacgcactaatggaggagatgctccagcaaggagacacggcagtcatttacccag
aggccccagaggacgagcctcaacgccagggcacccctgatgccagcgtccacgatgaaa
atggaactcctgattccttctctcagctgctcacctgcccgtactgcgcgcgtggctaca
agcgttacagctccctgaaggagcacatcaagtaccggcacgagaagaccgaagagagct
tcaactgccccgagtgcagctacagcttcgcataccgcgctcagctggagaggcatatga
cggtccacaagggcggacgggatcagagacacatcacacagtcgggaggcaatcgtaaat
tcaagtgcactgaatgtggcaaagcatttaaatacaagcaccacctgaaggagcacctac
gcatccacagtggagagaaaccgtatgagtgctccaactgcaagaagcgcttctctcact
caggctcatacagctcccacatcagcagtaagaagtgcatcagcgtcatctcagttaacg
gaagagcgcgcttggggaacgccaaaacccagacccaggctccatctccagggctgccca
cgtcaccatcagccctccgcacccagatgcagaagatggagcacagcaagccactgcagg
agcagctgccactcaatcagatcaagactgagcctgtggactatgagtacaagcccacat
tgatgacatccgcagcaatggccgctatgaacggtggggttttccacggaggtactgcac
ctctgcagggcacggtgcaggctgtggtccttcccactatggggctgatgtcacccatca
gtatcaacctggccgacctacagaatgctctcaaagtggcggtggacggaaacgtcattc
gccaggttctggaaagcaatgccaaaggtcagctgcaaatgcactcgggactaaccactg
gaatgctccatcccacacagcagcaactcatctcagccatcagtctgcctattgtgggtc
aggacggaaacacaaaaatcattataaactacagtttggaccccaaccagggccagctca
cagcccataacatgaagaaagagcccgaggcaacctcactaggccagaaactcccagagg
atctaaccatcaaaggctcccggctcaatgagactaaagaaaaagaggaaaagaccacta
aaacctgcctcctgtgtgataactgtcccggtgggctggaatcactccatgccctcaagc
actgcaaggatggccttaggctgaacggtctggataagtctgagtctgctgtggctgcct
tgctgtcagagggcgggctctgtaaccaacccaagaacctcttgtccctgctcaaggctg
tggccttaaaagcagagcccaccaaggatgagctggccaagatctctgactcagtcagcc
tgccagcgcatgtggtaaagaagtggtttgacaaaatgcaagagggtcagatatcactgg
gtgctccaacacctccctcagaggaagaagacacctgtgaagctaacagtgtggtgtctc
tggtccaagggaaggacacgtgcccctctgtgacccaggacagccctacagaagccactc
cagcggagttcaacggcgcacatagctcgccggcctctccctcgccactaaacctgacag
ctggcggtcccgtcccatcccagccttcccagagcactgagggacccctagacctgtcac
tgccaaagcccgccggagggggaccagagagagcagtgggtaaagcctgtgttaacgcct
ctccttccctccgctctacccatgtggatgaacccctaaacttaacttgcacaaagaagg
aggcatcgccactcttagccatgggcgccagccacatcgcactgtacgccagccagcaaa
gtgccaaacccctcaacattgttaccacaatgcaatgcctaagggcactttccactaaca
acaaacagactatcctgatcccccagctggcttacacctataccactacagcaaacagcc
ctgctgggacccagacccaggagaccctccacctcaacggaataaaggaggagaagatgg
acccaggctcagatggtatgtccaccgtggaggagcagaacgactctgactcgggcccac
agaggaagaagatgaagaagacggagagcggcatgtacgcctgtgacctgtgcgacaaga
tcttccagaagagcagctcgctgctgagacacaaatacgaacacacagggaaacgacctc
acgagtgcggcatctgcagcaaagccttcaaacacaaacaccacttgatcgaacacatgc
ggctccactcaggggagaaaccctaccagtgcgacaagtgcggcaagcgcttctcccact
cgggatcctactcccagcacatgaaccaccgctactcctactgcaagaaggagacgccgg
gtcagggcgagggccgcgaaagccccgagaacgaggcagaggccagagctgagatggagg
cgctgagccggctgcagcagctcctcgccccctcgcagctggacttggacgagcgaggga
gcagcaccagagacgaagaggagagcgaggaggaggaggacggtgcggtggacatggacg
acatccaggtggtggagataggggacgaaggaggggatgaggatgaggaagagaggaatg
aggagagagtattagtggagggaggaggagatgaggagaagacagagatggaggtggctg
aggaagaagaggaggaagacacaaggcaggcggaggtgctcgggagcattcaggaagagg
aggaagtcgagatgcaggaagaggaggccatggatacggaagaaggggtgacggaagagg
gcaaagaaggggagcaggtcacggaggagagtggaggagaaaaagacagtgagacggttt
ctgaggagcagaaggagacgccggaggaggaaggagactaa
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