Notothenia coriiceps (black rockcod): 104953239
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Entry
104953239 CDS
T04920
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit C-like
KO
K03252
translation initiation factor 3 subunit C
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ncc03012
]
104953239
Translation factors [BR:
ncc03012
]
Eukaryotic type
Initiation factors
eIF-3
104953239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
Collagen
Phycobilisome
DUF2779
Motif
Other DBs
NCBI-GeneID:
104953239
NCBI-ProteinID:
XP_010778461
UniProt:
A0A6I9NVC2
LinkDB
All DBs
Position
Unknown
AA seq
1012 aa
AA seq
DB search
MSRFFATGSDSESEESSSADEIISKAPGGNFKQSLLISDDEEDTKRIVRSAKDKRFEELT
NLIKTIRNAMKIRDMSKCLEDFEQLCRAFLKSKTIVDKEGVPPFYIRLLADLEDYVNQLW
EDKEGKKKMNKNNAKALSTLRQKIRKYNRDYETEVAAYKENPQESADEEEEKEAADSEGS
SSDSEEEGEEEVMSAKDFLKKKPEVIQDASAFLKKGSGDESSSSSDDEDGEDWGSDTVDS
GSESSDDGEGKHASIAAVFLKKEDKPGDKKLGKKKKIKKKERIEEEAEEEGGEAWQEVKG
GMVMEKPKMFAKGTEINVPVVVKKLNEILQARGKKGTDRAAQIELLHALANIAAENNLGE
GITVKIKFNIIASLYDYNPNLAAFMKPDMWKKCLECIDELLDILFEHNDIFIGENIAEDS
ESLIISDQPFRVRGCILTLVERMDEEFTKIMQNTDPHSQEYVDNLKDEGHVCGIIDRLLN
YMENKGSTEEICRIYLRRIMHTYYKFDYKAHRRALGLPVETKSEQDQEESEGEDSAVIMD
RLCKFIYAKDRTDRIRTCAILCHIYHHALHSRWYQARDLMLMSHLQDNIQHADPPVQILY
NRTMVQLGICAFRQGMIKDAHNALLDIQSSGRAKELLGQGLLMRNMQERNAEQEKIEKRR
QVSPVIEIMCRFHMHINLDAAGSCVYLVSRMLLEIPLHAAMSRNARRRMISKQFPSPLRV
GEKTASSGTPREMREADVVAASXAXRWRRRTCHSSFIHEEMNSKVGTCFPETAATXVPRR
WLVRKIQEESLRTYLFTYSSVYDSISMGTLSEMFELEIPTVHSIISKMIINEELMASLDQ
PTQTVVMHRTEPTSLQNMALQLAEKLGSLVENNERVFDLKQGIYGGYFNRDQKGGYQQNK
SYNREGRGGGYQQNRGGYNRGGYRNQNYQNHGNQGSYQNHGNHGSYQNHGNHGSYQNQGN
RGSYQNQGNRGSYGNRGNHDNHDNHDNHGNRGSYGNHGSYGNHGSYQNHSNY
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtttctttgccaccgggtctgacagtgagtcagaggagtcttcatctgctgat
gaaatcatctctaaagcacccggaggaaatttcaagcagtccttgcttatcagtgatgat
gaggaggacaccaagagaattgtgcgcagcgccaaagacaaaaggtttgaggagttgacc
aacctcatcaaaacgatccgaaatgctatgaagattcgtgacatgtccaaatgtctggag
gattttgagcagttatgtcgagcctttctcaaaagcaagactatagtggacaaagagggg
gttccccctttttatatccgtcttctggccgacctggaggactatgtgaatcagctttgg
gaggacaaagagggcaagaagaagatgaacaaaaacaacgcaaaggccctcagtacgctg
cgtcagaagatccgcaagtacaacagagactacgaaacagaagtagctgcatacaaggag
aacccacaggagtccgctgatgaagaggaggagaaggaggcagcagattctgaaggctca
tcttctgatagcgaggaagagggcgaggaagaggtgatgtctgccaaagacttcttaaag
aaaaaacctgaggtgatccaagatgccagcgcgttcctcaagaagggatccggggatgag
tcctcgtctagcagtgatgacgaagatggggaagactggggatcagacactgtcgacagt
ggcagtgagagctcggatgatggggagggaaagcatgcttccatcgctgcagtcttcctc
aagaaggaagataagcccggcgacaagaagctcggcaagaagaagaagatcaagaagaag
gagcgcatagaggaggaggctgaggaggagggaggagaagcctggcaggaagtgaaggga
ggcatggtcatggaaaagcccaagatgtttgccaaaggcacggagatcaacgttcctgtg
gtggtgaagaagctgaatgagatcctgcaagcaagaggcaaaaagggcacggacagggct
gcccagatcgaactgctccatgctctggcaaacatcgctgctgagaataatttgggcgaa
ggtattacggtcaagattaagttcaacatcattgcctccctgtacgactacaaccccaac
ctggctgctttcatgaagcctgatatgtggaagaagtgcttggaatgtatcgatgagctg
ctggacatcctgtttgaacacaacgacatcttcatcggagagaacatcgccgaggacagc
gagagtctgatcatctcagaccagccattcagggtgcgtgggtgcatcttaacgctggta
gagaggatggatgaagagttcaccaagatcatgcagaacactgatccccattcacaagag
tatgtggacaatctgaaggacgagggtcacgtctgtggcatcatcgaccgactgctcaac
tacatggagaacaagggcagcacggaggagatctgccgcatctacctgcgcagaatcatg
cacacctactacaagttcgactacaaggctcaccgccgcgccctgggcctgccggtcgag
accaagtcggagcaggaccaggaggagagcgagggcgaggacagcgctgtgatcatggac
cgtctctgcaagttcatctacgccaaggatcgcaccgaccgcatccgtacctgcgccatc
ctctgccacatctaccaccacgcgctgcactcccgttggtaccaggcccgcgacctgatg
ctgatgagccacctgcaggacaacatccagcacgccgacccccccgtacagatcctgtac
aacagaaccatggttcagcttggcatctgcgcctttaggcagggcatgattaaagatgcc
cacaatgccctgctggacatccagtcctctggccgcgccaaggagctgctgggtcagggt
ctgctgatgaggaacatgcaggagaggaacgcagagcaggagaagatcgagaagagaaga
caagtaagtcctgtgattgagatcatgtgccgtttccacatgcacatcaacctggatgct
gctgggagttgtgtgtacctggtgtcccgcatgctgctggagatacccctacatgccgcc
atgagtcgaaatgcccgccgcaggatgatcagcaagcagttcccatcaccgctgagagtg
ggagagaagacagcctcttctgggaccccccgagagatgagggaggcagatgtggtggcc
gccagttaagcctgaagatggagacggcgcacctgccactcctcattcatccacgaagag
atgaacagcaaggttgggacctgcttccccgagaccgcagcgacctgagtgccgcggaga
tggctcgtcaggaagatccaagaagagtccctgaggacttatctgttcacgtacagcagt
gtgtacgactccatcagcatgggaacactttctgagatgtttgagttggagatcccaaca
gttcacagcatcatcagcaagatgatcatcaacgaggagctgatggcgtccctggaccag
cccactcagacggtggtgatgcaccgcacagagcccacctccctgcagaacatggccctg
cagctggctgagaaactgggcagcctggtggagaacaacgagcgcgtcttcgacctcaag
cagggcatctatggaggctacttcaacagagatcagaaaggtggctaccaacagaacaaa
tcttacaacagagaggggagaggaggcggttaccagcagaataggggaggctacaatcgc
ggtggttacagaaatcagaactatcagaaccatggcaaccaggggagctatcagaaccat
ggcaaccatgggagctatcagaaccacggcaaccatgggagctatcagaaccaggggaac
cgtgggagctatcagaaccaggggaaccgtgggagctatgggaaccgtggaaaccatgat
aaccatgataaccatgataaccatggcaaccgtggaagttatgggaaccatggaagttat
gggaaccatggaagttatcaaaaccactcaaactactga
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