KEGG   Notothenia coriiceps (black rockcod): 104953320
Entry
104953320         CDS       T04920                                 
Name
(RefSeq) tenascin-N-like
  KO
K06252  tenascin
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04510  Focal adhesion
ncc04512  ECM-receptor interaction
ncc04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104953320
   04518 Integrin signaling
    104953320
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104953320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:ncc00536]
    104953320
Glycosaminoglycan binding proteins [BR:ncc00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104953320
SSDB
Motif
Pfam: fn3 EGF_Teneurin EGF_TEN EGF_2 EGF_Tenascin Fn3_Dep-1_3rd FN3_DSCAM-DSCAML_C Fn3_Dep-1_2nd Interfer-bind Fn3_VIN3 DUF4998 Fn3_Dep-1_4th DUF7949 NDNF EGF DUF460 Arylsulfotran_N hEGF Ig_ENGASE1_C EGF_PEAR1L
Other DBs
NCBI-GeneID: 104953320
NCBI-ProteinID: XP_010778547
UniProt: A0A6I9NQ98
LinkDB
Position
Unknown
AA seq 586 aa
MTSSLLWRALCLLVTLCTVSHFSSATRHPGPSAPEQGVTFSHVYKIDIPGTSSCKLESLP
AQDEAGLQTETTSNGENDITFRHNIRLQTPKCDCEDSESFKSLLYRVNGLEEEVTYLKTA
CTQGCCGGGGAAGVDTSCSGHGTYQPETCSCLCNPGWEGPDCSVSSCPDECNDNGRCVDG
KCVCLQGYTGEDCSQLICPDDCNDKGQCVDGKCVCFPNFTGEDCSIQKCPNDCIGNGQCV
DGQCICEEGFYGEDCSLVIGPQGLRLVQLTDVSLLVEWESVRRAEYYILTYHPKDDESAL
KQVKVPNTENSHLIKKLSPGVTYIVKVYAVIKEIQSEADKLEATTDVSTVDGIRVLGQTE
VSIKVDWKNPRSEVDHFRLTHINPAGQEEELNVKRSQEARTKHTIVGLIPGTEYQISVQA
IKGTSEGKPSSVTGATDIDSPTNLVTTEVTEDTATVSWDRVQAEIQGYMLSYTSADGSSS
DIPVGRESTSYRLVGLKPGVLHTVYIWAFKGDKVSKKSSTEAETELDAPTNFLARDETES
SFRVSWDHTKAEVDGYMLSYSSSEGLSEEIPVGSESTSYVLTGLRP
NT seq 1759 nt   +upstreamnt  +downstreamnt
atgacttccagtctcctgtggcgggccctgtgcctgctggtgacgctctgcactgtgtca
cacttcagctccgccactcgccaccccggcccctcagctccagagcaaggggtcaccttc
agccacgtctataaaattgacatccctgggacttccagttgtaaacttgagagcctgcca
gcccaggacgaagcaggtctgcagactgagaccacttctaatggggagaacgacatcacc
ttcagacacaacatcaggctgcagacaccaaagtgtgactgtgaggattctgaaagcttc
aagtcacttttgtacagagtcaatgggctggaggaagaagtcacctacctaaagactgcc
tgtacccagggatgttgtggaggtggtggagctgcaggagtggacacgagctgtagtggg
catggtacctaccaaccggagacctgcagctgcctctgtaacccagggtgggaaggccca
gactgctccgtgtcctcctgccctgacgagtgcaatgacaacggtcgatgtgtggatggg
aagtgtgtgtgccttcagggctacacaggcgaggactgtagccagctgatatgtccagac
gattgcaacgacaaagggcaatgtgtggatggcaaatgtgtgtgtttcccaaacttcacc
ggcgaggattgcagcatccagaagtgtcccaacgactgcattggtaacggccagtgtgtg
gatggccagtgcatctgtgaagaaggcttttatggcgaagactgctcattagtcatcggc
cctcagggtctgcggctggtccagctgaccgacgtctctctcctggttgagtgggagtca
gttcgcagggcagagtattacattctgacatatcatcccaaagatgatgagagtgccctg
aagcaagttaaggttcccaacacagagaactcccaccttattaagaagttgagtcctggg
gtcacttacattgtcaaagtttatgccgtcatcaaagaaatccaaagtgaagcagacaag
ctcgaggctaccacagatgtctccactgttgatggtatcagagttcttggccagacagaa
gtctccatcaaggtcgactggaagaacccgcgttctgaggtggatcacttcaggctcaca
cacatcaacccagcaggacaggaggaggagctgaacgtcaagaggagccaagaggcgcgc
accaaacacactattgtcggtctgattccaggaacagagtaccagatatcagtgcaggcc
atcaaaggaacctctgagggaaaaccttcctccgtcacgggagccacagacattgactct
cctactaacttggtcaccactgaagtaacagaggacacggcaacagtgtcatgggatcgt
gtccaggcagaaatccagggctacatgttgagctacacctctgctgatggatccagcagc
gacatcccagtaggacgtgagagcacgtcgtacaggctggtcggcttgaagcctggagtt
ctccacaccgtctacatctgggccttcaagggagacaaagtcagcaagaagagttcaaca
gaagctgagacagagctggatgcccctactaacttcttggcccgagatgagacagagtcc
agcttcagggtgtcctgggatcacaccaaggcagaagtcgatggctacatgctaagctac
agctcctctgagggcttgagtgaggaaatccctgtcgggtctgagagtacttcctacgtg
ctgactggcctcagacctg

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