KEGG   Notothenia coriiceps (black rockcod): 104953323
Entry
104953323         CDS       T04920                                 
Symbol
rab5a
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04137  Mitophagy - animal
ncc04144  Endocytosis
ncc04145  Phagosome
ncc04148  Efferocytosis
ncc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104953323 (rab5a)
   04145 Phagosome
    104953323 (rab5a)
   04137 Mitophagy - animal
    104953323 (rab5a)
   04148 Efferocytosis
    104953323 (rab5a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104953323 (rab5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104953323 (rab5a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncc04147]
    104953323 (rab5a)
   04031 GTP-binding proteins [BR:ncc04031]
    104953323 (rab5a)
Membrane trafficking [BR:ncc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    104953323 (rab5a)
 Endosome - Lysosome transport
    104953323 (rab5a)
Exosome [BR:ncc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104953323 (rab5a)
  Exosomal proteins of other body fluids (saliva and urine)
   104953323 (rab5a)
  Exosomal proteins of colorectal cancer cells
   104953323 (rab5a)
  Exosomal proteins of bladder cancer cells
   104953323 (rab5a)
GTP-binding proteins [BR:ncc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    104953323 (rab5a)
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 104953323
NCBI-ProteinID: XP_010778550
UniProt: A0A6I9NUF5
LinkDB
Position
Unknown
AA seq 215 aa
MANRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLATKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPQAAGANSGRSRVVDLTPAPPAKAPCCST
NT seq 648 nt   +upstreamnt  +downstreamnt
atggccaatcggggaggagctacgagacccaacggacccaatgcagggaacaagatctgt
cagtttaagctggtgctgttgggggagtcagccgtggggaagtccagcttagtgctccga
ttcgttaaagggcaattccatgaattccaggagagcacgataggagctgcctttctcacc
cagacagtgtgtctagatgacacaacggtgaagtttgaaatctgggacactgccggtcag
gagcgttaccacagtttggcccccatgtattacagaggagcacaagccgccatcgtggtc
tacgacatcacgaacgaggagtcctttgcccgggctaagaactgggtgaaggagctgcaa
agacaagccagccctaacatagtcatcgctctgtcaggcaacaaggccgacctggcaacc
aagagagctgtcgacttccaggatgcccaatcctacgcagatgacaacagcttacttttc
atggagacgtcggccaagacatctatgaatgtgaacgagatatttatggctattgccaag
agattgccgaagagtgagccccaggctgcgggggctaacagtgggcggagccgggtggtg
gacctgacacctgcgccgccggccaaggctccgtgctgcagtacctaa

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