Notothenia coriiceps (black rockcod): 104953455
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Entry
104953455 CDS
T04920
Symbol
man2c1
Name
(RefSeq) alpha-mannosidase 2C1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
104953455 (man2c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104953455 (man2c1)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
104953455 (man2c1)
Membrane trafficking [BR:
ncc04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
104953455 (man2c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_38N
Ams1-like_1st
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
104953455
NCBI-ProteinID:
XP_010778707
UniProt:
A0A6I9NQV4
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MYHLPVLKNRRTLLERAEKFISDIYFTDCNLRGRLYGDSCPLQSIDSFLSSKRITFTEAS
NQTFAPYKVGDSFGPTWWTCWFKVTLNIPESWRGKEVHFRWESDGEAMVWRDEQPVQGLS
KEGEKTSYILSDCLKDEEPNSVTLYVEMACNGLFGAGQGSMIAAPDPNRTFSVQKAELVV
FNRDVQEMLTDFEMLIDIVKELGEGEQRGFQALFTVNEMVNLCDPSDPSSFSRAHSLAHT
FFCQRNGDSQHVAHAMGHCHIDSAWLWPYEETIRKCGRSWVTVIRLMEKNPEFVFTCSQA
QQFQWVKSWYPGLFSEIQHYVKKGRFIPVGGTWVEMDGNLPSGESMVRQFLEGQRFFDRE
FGIHCNEFWLPDTFGYSAQLPQIMQGSGISNFLTQKLSWNLVNTFPHNTFFWEGLDGSKV
LTHFPPGNSYEMKGKVEELVKTVKNNKDKGRANHSAVLFGFGDGGGGPTQLMLDRLQRVQ
DTDGLPKVQMSSPDKLFSQLQADSALLCTWTGELFLELHNGTYTTQAKIKQGNRQCETLL
HDIEIASSLALCQDKTFIYPVEKLQELWRLLLLNQFHDVIPGSCIEMVVDDALRYYEDIR
TDGAALLHDACGALGSKGNSPGVFNSLPWERHEVIQMHEGPGTPDLALVRVPSIGVSPVG
DTKPVAPVTITGQADGTLLMENGILRTVVNKDGTLASLYLINANREAISDSCHGNQFVMF
DDVPLYWDAWDVMDYHLQTRKPVVEVVQPPHQVYSDGLRGSVRFTLRISDKSTITQEIIM
DAMCPYIKFNTKVTWAESHKFLKVEFPVRVRSPNATYEIQFGHLQRPTHRNTSWDWARFE
VWGHKWADLSEHNFGVALLNDCKYGYSVHKNTMTLSLLRAPKAPDVNADMGTHQFTYAIM
PHTGSFQDASVIQAAYNLNFPLRPIRCPADTVPWSAFSISTAAVILETIKQAEDRKGALV
VRLYESHGSSVTATLRTTFPIREAWHCDLLEKPDPTRPAHITSGGITLDFSPFQIVSLLL
VF
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtatcacctgcctgtgctgaagaacaggcgaactctcctggagagggcagagaagttt
atctccgacatttatttcacagactgcaacctgagaggacgactctatggagactcttgc
ccactgcagtccattgactccttcttgtcctctaaacggatcacattcacggaggcctcc
aatcagacctttgcaccatataaagtgggtgattcctttggaccaacgtggtggacctgc
tggtttaaagtgaccctgaacatccctgagtcctggagagggaaagaggtgcattttcgg
tgggaaagtgatggagaagcgatggtttggagagatgaacagccagtgcagggcctgagt
aaagagggtgaaaagactagttatatcctgtctgactgtctgaaggatgaggagccaaac
agtgtcaccctttatgtagagatggcctgtaatgggctttttggagctggtcaaggatcc
atgattgcagccccggatccaaacaggacattttctgtccaaaaggcggagctggtggta
tttaaccgtgatgtacaggagatgttgactgattttgagatgctgattgacatcgtaaag
gaacttggagagggagagcagaggggcttccaggcgctcttcactgtgaatgagatggtg
aacctgtgcgacccgtcggaccccagctccttctctagagctcacagcctggctcacacc
ttcttctgccagagaaacggagacagccagcatgttgctcatgcgatgggtcactgccac
atagactcagcttggctgtggccctatgaagagaccattcgcaaatgtggccgaagctgg
gtgacagtgatccgtttaatggagaagaacccagagtttgtattcacttgctcccaggcc
cagcagttccagtgggtaaagagctggtacccaggactcttctctgagattcagcattac
gttaagaaaggccggttcattccagtaggaggaacatgggtggaaatggatggcaatctg
ccttcaggcgagtccatggtcagacagttcctggaaggccagcgcttctttgaccgtgag
tttgggatccattgcaacgagttttggcttccagatacgtttggctactctgcccaactt
cctcagataatgcagggctctggcatttccaatttcctaacacagaagcttagctggaac
ctggtcaacacctttcctcacaacacatttttctgggaaggtctggacggatcaaaggtt
ttaacacatttcccgccaggaaattcctatgaaatgaaagggaaggttgaagaactggta
aaaactgtgaagaacaacaaagacaagggcagagcgaaccacagtgctgtgttgtttggg
tttggagatggaggcggtggaccgacacagctgatgctggacagactgcagcgggtccag
gacacagatggacttcccaaggtccagatgtccagtcctgacaagcttttctctcagctg
caggctgactccgccctgctttgtacttggaccggagagctcttccttgagctgcacaac
ggcacatacactacgcaggccaagattaaacaggggaaccgtcagtgtgagacgctgctt
catgatattgagatagccagcagcttggcgctttgtcaggacaagacttttatatatcct
gtggaaaaactgcaggagctctggaggcttcttctgctaaaccaattccatgatgtgatt
cccggcagctgtatagagatggttgtggatgatgctctcagatattatgaagatatccgc
actgatggtgctgccctgctgcacgatgcctgtggagccctcggttcaaaaggaaactcc
cctggtgtgttcaactctctgccatgggagcgccatgaagtcatccagatgcacgaagga
cctggtacacccgatctggctctggtgagagttcccagcattggtgtgtctcctgttgga
gacacaaagcctgtggctccagtgactatcactggtcaagctgacggaacattgctcatg
gagaatgggattttacgaactgtcgtaaacaaagatggcactttggcgtctctgtatttg
atcaacgccaacagagaagccatctctgacagctgtcatggcaaccagtttgtcatgttt
gatgatgtccctctgtactgggatgcttgggacgtaatggactaccatctgcagacaagg
aagccggttgtggaggtggtgcagcctcctcatcaggtgtactcagacgggctcagagga
agtgtccgcttcaccctcaggatcagtgataagagcaccatcacacaggagattatcatg
gatgccatgtgtccttacatcaaattcaacactaaggtgacgtgggcagagtcacacaag
tttcttaaggtggagttccctgtgcgggtacgcagccccaacgctacatatgagatccag
tttggccatctgcagagacccacacacaggaacacttcatgggactgggccagatttgag
gtttggggtcacaaatgggccgatttgtcggagcacaactttggggttgcactgctgaac
gactgcaaatacggctattcagtgcacaagaacactatgacgctgtccctactgagagca
cctaaggcacccgatgtcaacgctgacatggggactcatcagttcacctacgccatcatg
cctcacacaggatccttccaagatgcctctgtcatccaggctgcgtacaacctcaacttc
cctttgaggccaatccggtgccctgctgacaccgtgccctggagtgccttttccatcagc
actgctgcagtgatccttgagaccattaaacaggctgaggacaggaagggagcactcgta
gttcgactttatgagtcacatgggagcagcgtcactgcaactctgagaaccacctttccg
atcagggaagcctggcactgcgatcttctggagaaaccagaccccacccgtccggcacac
atcacgtcagggggaatcactctggatttcagcccctttcaaattgtgtcccttctcctc
gtcttttaa
DBGET
integrated database retrieval system
