Notothenia coriiceps (black rockcod): 104953456
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Entry
104953456 CDS
T04920
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104953456 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104953456 (neil1)
Enzymes [BR:
ncc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
104953456 (neil1)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104953456 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
104953456
NCBI-ProteinID:
XP_010778708
UniProt:
A0A6I9NM63
LinkDB
All DBs
Position
Unknown
AA seq
403 aa
AA seq
DB search
MPEGPELHLGSLYVNKMCAGVVFTGPVRKSEVSKSPDVPFTCEAYRITASSRGKEVKLTL
TPMKSDDLKQRSKADQAMDVVFRFGMSGYFRFTSEDELPKHSHLRFYSKETPCRVLSFVD
TRRFGSWQANGTWQPDRGPCIMFEYESFRKNVVTHLSDRAFDRPICEVLLNQKYFNGIGN
YLRAEILFRLNIPPFVPARSVLEGLESEDLCENEKPLKTEIKDEKASDRVKTVKEETGDL
LRLCHTVPLEVVNQGGKGYDPKKEDYSEFKAWLQCYYVDGMKSLRDHNGRTMWFNGDPGP
MAPKDLKSPKAKKRAKKTEDHDYTDKKKGAKGGSKSTPKKKVVKQETKTAKKEIEKSEEM
VSPQTKKRPAARGRKTSSAEPAAVVLVAGPEKRSGRVTRQSSK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggacctgagctccaccttggcagcctttacgtaaacaaaatgtgtgctgga
gtggtgttcactggcccggtcagaaaatctgaagtcagcaaaagtcctgatgtgcccttc
acctgtgaggcctatcgcatcactgcctcttccagagggaaggaagtgaagctcacgctg
acgcctatgaaaagtgatgatttaaaacagagatctaaggcagaccaggccatggacgta
gtcttccgctttgggatgtcaggctatttccgcttcacctcagaggatgagctgcccaaa
cattcccatctgcgtttttattctaaagagacgccctgcagagtgctgagctttgtggat
acacgcaggtttggcagctggcaggccaacgggacttggcagcctgacagagggccctgc
atcatgtttgagtacgaaagcttcaggaagaacgttgtgacgcacctgtctgaccgagcc
tttgacaggcccatctgtgaagttctgctcaatcagaagtacttcaacggtatcgggaac
tacctgagggctgaaatccttttcaggttaaacatcccaccctttgtgccagcgaggtcc
gtactggaaggcctcgagtcagaagatttatgtgaaaacgagaagcctttgaaaactgag
atcaaggacgaaaaggcctcagacagggttaagacggtgaaagaggagacgggagacctg
ctcagactgtgtcataccgttcctctggaggtggtgaaccaaggtggaaagggctacgac
cccaagaaggaggactactctgagtttaaggcatggctgcagtgttactatgtggatggg
atgaaatcattacgggaccacaatggcagaactatgtggttcaacggagatccaggcccc
atggcacctaaagacttaaagtcacccaaggcaaaaaagagagcaaagaaaacagaggac
catgattacacggataagaaaaagggggccaaaggaggctcaaaaagcacaccaaagaag
aaggtggtcaaacaggaaaccaaaacagcaaagaaggaaatcgagaagtctgaagaaatg
gtatcacctcaaacaaaaaagagaccagctgctcgtgggaggaagaccagcagtgcagag
ccagctgcagttgtccttgttgcaggtccagagaagcggagtgggagagttaccagacag
agcagcaaatga
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