Notothenia coriiceps (black rockcod): 104953717
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Entry
104953717 CDS
T04920
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104953717 (zbed4)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
104953717 (zbed4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
DUF4404
Motif
Other DBs
NCBI-GeneID:
104953717
NCBI-ProteinID:
XP_010778996
UniProt:
A0A6I9NWV0
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MDGEEEVSPMSEDVVSEPNGTTESKKREAKGTCLKIEGQDGYVFKSYSIKPHEAADAKSP
ASSLTLDKDPPQSPPLSPQDDKLLESDKASETDPASPTLSNKCLNTESEENTEKENGDEA
SQHIKEEIVDTNGMEDETQDDERLGFGSSVGPFVTRDGDDYSNLLNGYTSTLYDVAMDAV
TQSLLSSMRSNNNPRKKSPAWNHFCISPRDSTKAICLYCMKEFSRGKNEKDLSTSCLMRH
VRRAHPTVLLQDGADASSNNLTSSLSSSLIPPSPNSPKNGDLTNSSASKNTSPSTSSADN
SDLSSKEVLPKVEPKLEPLANTDTIFSSLSSSHSNENNLENMSDSGPDRLPGTPKSSSSR
RRSAVWKHFYLSPADSSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHKEVVIEENGQ
GNHIPPPYTNPPSLLSRTQLQDPLDIKKESPLLPSSPETISDELPQSMDESMDIKEESDE
VMNLSGQESSVNLFFKTQEEDPPLTSSPCDLSEGPSVTQDHSVFQQNKKIMKRVKSEVWH
HFIVSPIDQLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRHPDVLKNQKSTDEKDSSPH
PYTNLTTTDAVSTKETASPACEKKPQTLPGFSKKTSKLWNHFSISPTDPTKVICLHCGRT
ISRGKKTTNLGTSCLFRHMQRFHGHILESKNAISGEVPSAEINVKQELMDTSVYETEQNL
ERFDEHHPVAKKITKLIAEMLALDLQPSAMVENAGLNRLLEYLQPQYSLPTSSYFTSTAI
PDMYERVKEVVLTHLKEAEGGVVHFTTSIWVSSQTREYLTLTAHWATYESSVRPQGQDFH
CSALLSVSQIDCDQDMHDIPKQLEYLWDSWVTSSGLKKGFTVTDNNTIRNTLEDHGHVAM
QCFGHTIDLIVSEAIKSQRMVQNLLSIARKICERVHRSAKAKEKLAELQRAHELPENQLI
QDVPSKWRTSFFMLERLVEQKKAIDEMSIECNFREMISCDQWEVMLSVCNALKPFEVACR
EMSNRTATLGQVIPLIHILNRKIDLLFDETVGIDNMLMSLKEAMVSKMSTTLHDPRYTWA
TMLDPRYKTSLFTEEEAEQCKQDLIGEMESSSSTSVGVKPLLPNGCNEAPASANAPHQNK
DNLWSLMADIRQKIKHEEKPRSSELAVLEYLEEDILDQSCDPLDYWNLKKFLWPDLAKVA
ARYVGCPPSIVPSETLFSTASVNCALNQPRPLLENMEGLLFLKVNLPLIYFQY
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaggaagaggtgtctcccatgagtgaggatgtggtcagtgaacccaatggc
accacggaaagtaaaaagagagaggccaaagggacctgcctgaaaatcgaaggccaggat
ggctacgtgttcaagtcctacagcatcaagcctcatgaggctgctgatgcaaagtcacct
gcaagctctttaacactggataaagaccctccacaatctccccctttatctcctcaggat
gacaaactgttggagtcagacaaagcaagtgagactgatccagcttctcccactctttca
aacaaatgcctaaacactgaatctgaggagaatacggagaaggaaaatggggatgaagca
agtcaacatatcaaagaggagattgtggacacaaatggaatggaggatgaaacccaagat
gacgaaaggctaggattcggtagctctgttggcccttttgtaactagagatggtgatgat
tacagtaatttactaaatggatacacaagcaccctttatgatgttgccatggacgctgtc
actcagagccttctgtcatctatgaggagtaataacaacccgaggaagaaatcccctgca
tggaatcatttttgcatatcaccacgagacagtaccaaagcaatctgtttatactgcatg
aaagagttcagtcggggcaagaacgagaaagacctcagcacgagttgtttaatgaggcac
gtgcgaagggctcaccccactgtgcttttacaagacggagcagacgcatcctcaaataat
ctcaccagctccctctcctcatctttgatacctccatccccaaactcaccaaaaaacgga
gacttgactaattcttctgcctcaaagaacacttcaccgtccacctcctcagctgataac
tcagacctgtcatccaaagaagtgttacccaaagtcgaaccaaaactagaaccgcttgcc
aacactgataccatttttagctcgctctcatcctcacattccaatgaaaacaaccttgaa
aacatgtccgacagtgggcctgatcgcctccccgggaccccaaaaagctcaagttcccgc
cggagatcagctgtatggaaacacttctacctgtcgcctgctgacagttccaaagctgta
tgcatccattgcatgaatgaattcagtagggggaaaaatgggaaggatctcgggacaagc
tgtcttatccgtcacatgtggagggcccacaaagaggttgtcattgaggaaaatggacag
ggcaatcacattcccccaccctatacaaacccaccctcactactgtcccgcacacaacta
caggatcctctagacataaaaaaagaatcaccccttcttccatcctcgccagaaaccata
tcagatgaattaccccaaagcatggatgaaagcatggacataaaagaggaatctgatgag
gtgatgaatctttcagggcaggagtcgtctgtcaatctcttcttcaaaactcaggaggag
gacccacccctaacctcctcaccatgcgacctctctgagggcccgagtgtcactcaggat
cattccgttttccagcaaaacaaaaagatcatgaaacgggtgaaatcagaagtgtggcac
cattttatagtgtcaccaattgaccagttgaaagcactgtgccgttactgtccatgcgtc
atcagccgggggaaacggggcgactttggtacaagttgtctgatgaggcatctaatgaga
cgccacccagacgttctcaaaaaccaaaaaagcacagatgagaaggattcctctcctcac
ccctacactaatctcaccacgacagacgcagtttcaaccaaagaaactgcgagccccgcc
tgcgagaagaagccacaaacactgcccggtttcagtaaaaagacgtcaaaactgtggaac
catttctccatttcacctactgaccccacaaaggtgatttgtttgcactgtggccgcaca
attagcagaggcaaaaagactactaacctcggcacaagctgcctcttcaggcacatgcaa
aggtttcatggacatattcttgaaagtaaaaatgctatctcaggtgaagtgccgtctgct
gaaattaatgtcaaacaagagctcatggacacttctgtttatgaaacggaacagaacctt
gaaaggtttgatgaacaccacccggttgccaaaaaaatcaccaaacttatcgcagaaatg
ctcgcactggatcttcagccatcggctatggtggagaacgctggactaaacagactacta
gagtacctccagcctcagtattctctaccaacttcttcttactttaccagcactgccata
ccagatatgtatgaaagggtgaaggaagttgtgctgacccacctgaaagaggccgaaggt
ggtgtggtccacttcacaactagtatttgggtcagcagtcagacacgggaatacctgacc
cttactgcccactgggcgacttacgagtcaagcgtcagaccgcagggtcaggacttccac
tgctcggctctcctaagtgtctcccaaatagactgtgatcaagatatgcatgacatcccg
aagcagctggagtatctgtgggattcttgggtcacctcgtcagggctgaaaaaggggttc
actgtaacggataacaacaccatcagaaacaccttggaggaccatggacatgtcgccatg
cagtgtttcggacacactattgacctcattgttagcgaagccataaagagccagagaatg
gttcagaaccttctgagtatcgcacggaagatctgtgaacgggtgcaccgctcagcaaag
gccaaggagaagctggccgagctgcagagggcccacgagctgccagagaaccaactcatt
caggacgttccttccaaatggaggacttccttcttcatgctggagcggcttgtcgaacag
aagaaagccatagacgagatgtcgatcgagtgcaatttcagggaaatgatcagctgcgat
cagtgggaggtgatgctgtcggtctgcaatgcactgaaacctttcgaggtcgcctgcagg
gagatgagcaaccgcactgccactctgggacaagtgataccactcatccacatcctcaac
agaaagatagacctgctgtttgacgaaacggtgggcatagacaacatgctaatgtctcta
aaggaagccatggtgagcaaaatgtccacaacactgcacgacccacgatacacctgggcc
accatgctggacccaagatacaagacttcgttgttcacagaggaagaagcagagcaatgt
aaacaagatctgatcggcgagatggagtcatcctcttctacctcagtcggggtaaagcct
ctgctgccaaacggctgtaacgaggcccctgcttcagccaacgccccccaccaaaacaag
gacaacctctggtctctaatggcggacatccgacaaaagatcaaacacgaggagaagcca
aggtcctctgagctggcagtgctggagtacctcgaggaagacatactcgatcaaagctgt
gaccccctcgactattggaacctgaaaaagttcctgtggcccgatcttgccaaagtagcc
gcccgttacgtgggctgccccccaagcatcgtcccgtcggagacactgttcagcaccgct
agtgtcaactgtgccctgaatcagcccaggcctttactggaaaacatggaggggttgctg
ttcctcaaagtcaacctcccgttgatttattttcagtactga
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