Notothenia coriiceps (black rockcod): 104953733
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Entry
104953733 CDS
T04920
Symbol
pcdh9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104953733 (pcdh9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncc01009
]
104953733 (pcdh9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104953733 (pcdh9)
Protein phosphatases and associated proteins [BR:
ncc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104953733 (pcdh9)
Cell adhesion molecules [BR:
ncc04515
]
Cadherins
Protocadherins
104953733 (pcdh9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
Neur_chan_memb
MAP17
Motif
Other DBs
NCBI-GeneID:
104953733
NCBI-ProteinID:
XP_010779018
UniProt:
A0A6I9NVZ7
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MDLKDYYLLGALFACLWLDPSIAQELIYPIREELQENVLIGNIPKDLNISHTNAATGASA
NLVYRLVSKAGDNPLVRVLSSTGEIFTTSNRIDREKLCPGPSFEDSECSFEIEVVILPND
YFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFAIPSATDPDTGPNSVHKYEL
INGQSAFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGSPQKSSTAILQVT
VTDVNDNRPVFKEGQIDVHIPENSAIGTSVVQLQASDADIGANAEIRYVFGTQVSAATKR
LFALNTTSGLITVQRLLDREETAIHKLSVLASDGSSSPARATVTINVTDVNDNPPNIDLR
YIISPINGTVFLSEKDPINTKIALITVSDKDTDINGKVICFIEKDVPFHLKAVYDNQYLL
ETSALLDYEGTKEYNFKIVASDSGKPSLNQTALVRVRLEDENDNPPIFTQPVIELAVMEN
NKRDLFLTTLSATDEDSGKNAEIVYQLGPNASFFDLDRKTGVLTASRVFDREDQDRFLFT
ITARDNGTPPLQMQAAVIVTVLDENDNNPKFTHNHFQFFVSENLPKYSTVGVITVTDSDA
GENAAVSLSILNDNENFILDPYSGVIKSNVSFDREQQSSYTFDVRAVDSGRPPCSSAAKV
TINVIDVNDNTPIVIYPPSNTSFKLVPLSSIPGSVVAEVFAVDGDTGMNAELKYTIVSGN
NKGLFRIDPVTGNITLEEKPALTDIGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTVGNS
TLIYDLIRRTMETPIDRNIGESSETYQSGDYLTIMIAFVTGALVVIIVIFVTVLLRCRHA
SRFKAAQRKKQGAEWMSPNTENKQNKKKKRKKRKSPKSSLLNFVTIEGNKPDDPAHEPIN
GTISLPTELEEQGIGRFEWNATPTTTFKPSSPDLARHYKSASPQSAFHLKADTPVSVKKH
HVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKAPMHTRQQINGHS
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaagactattacctgttgggtgccctgttcgcctgcttatggctagatcct
tcaatagcccaagagctaatataccccatcagagaggagttgcaagaaaatgtcctcatt
ggaaacataccaaaggacctaaacatttcccatacaaatgctgccactggagcaagtgct
aatcttgtgtaccggctcgtctccaaagcaggagataaccctctggtgcgtgttctgagc
agcactggcgagatattcactacatcaaaccgaatcgacagggagaagttgtgccctggt
ccctcgtttgaggacagcgagtgctcctttgaaattgaagtggtcatcctccctaatgat
tatttcaggctgattaagatcaaaataattgtcaaagacacaaatgataatgcccccatg
ttcccgtcccctgtgatcaacatctccatcccagagaacacgctcattaacagccgattt
gccattccttctgccactgacccagacactggccctaacagtgtccacaaatacgagctc
atcaacgggcaaagtgcctttggcttagacatagtggaaacgcctgagggggagaagtgg
ccccagctcattgtgcagcagaatctggacagagagcagaaggatacatatgtgatgaag
atcaaagtggaggatggtggcagtccgcagaaatccagcactgcaattctccaagttaca
gtaacggatgtcaatgataacagaccggtgtttaaagagggtcagatagatgtgcacata
ccagaaaactccgctattggcacatctgttgtgcagctccaggcgtcagatgcagacata
ggggcgaatgcagaaatacgttatgtatttgggactcaggtgtcagctgctacgaaaaga
ctctttgcattaaatacaacatctggcctaattacagtgcagagacttctcgacagagag
gagacggctattcataagctctctgttttagccagtgatggcagctctagtcccgcaaga
gctactgttactataaatgtgactgatgtgaatgacaatccacctaatatagacctgaga
tacataatcagtcccattaacggcactgttttcctctctgagaaggatcccatcaatacc
aagatagctctcatcacagtgtcagacaaagacactgacatcaatggcaaggtcatttgt
ttcattgagaaagatgtgcccttccatctaaaggctgtgtacgacaaccagtatctgtta
gagacatctgctctgcttgactacgaaggcactaaggagtataactttaaaatcgtggct
tctgactctggaaaacccagcttgaatcagactgccttggtaagagtgaggctggaggat
gagaatgacaacccgcctatttttactcagccagttattgagctagctgttatggaaaac
aacaagcgcgacctgttcctcacgactctcagtgccacagatgaggacagtgggaaaaac
gcagagatagtttatcagctgggaccaaatgcatccttctttgatcttgaccgaaaaact
ggggtcctgactgcatccagggtttttgatcgggaggatcaggataggttcctcttcact
ataacggcaagagataacgggacaccccctttgcagatgcaggcggctgttattgtaact
gtgctggatgaaaatgataacaacccaaagttcacacataaccactttcagttctttgtg
tctgagaatcttccaaaatacagcacagttggggtgataactgtcacagattcagatgcc
ggagaaaatgctgcggtttctctttccatactgaatgacaatgagaactttatcctggat
ccttactctggagtgattaaatctaatgtgtcattcgatagggagcaacagagctcctac
acttttgatgtcagggctgtggacagtggcaggcctccttgctcctcagccgccaaggtg
accataaatgtaatcgatgtgaacgacaacacccccattgtcatctatcccccctccaac
acatctttcaagctcgtacctctctcctctatcccaggatctgtggtagcagaagtgttt
gctgtagacggtgatacaggaatgaatgcagaactgaaatacaccattgtgagtggaaac
aacaaaggacttttcagaattgaccctgtcacaggcaatattactctggaggaaaaacca
gctttgactgacataggcttacacagattagtggtcaatatcagtgacctgggatatcct
aaatctctccatacgcttgtgctggtatttctgtatgtcaatgacactgtgggcaactcg
actctcatctatgatctcatccgacgcaccatggagaccccaattgaccgtaacattggt
gaaagtagtgaaacgtatcaaagcggtgactatttaaccataatgatagcctttgtaact
ggggcattggtagtgattattgtcatctttgtcactgtgcttctgcgctgccgccatgct
tccaggttcaaagctgcacagcggaaaaaacagggggctgagtggatgtcacccaacact
gaaaacaagcagaacaaaaagaaaaagcgcaagaaaaggaagtccccaaaaagctctctg
ctcaactttgtcaccattgaggggaacaagcctgacgatcctgctcacgagccaatcaac
ggaaccatcagcctgcccaccgagctggaagagcaagggattggacgctttgaatggaat
gccacacccacaacaacctttaaacccagcagcccagacctggcccggcactacaagtcc
gcctcgccgcaatcggccttccacctcaaggccgacacgccagtctcagtgaagaagcat
cacgtgattcaggagctcccattggataacacatttgttgggggctgtgacaccctttcc
aagaggtcctccacgagctctgaccacttcagtgcctcggagtgcagctcccaaggaggg
ttcaagacgaaggcgcccatgcacaccagacagcagattaatggccactcgtga
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