Notothenia coriiceps (black rockcod): 104953752
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Entry
104953752 CDS
T04920
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104953752
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
104953752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
104953752
NCBI-ProteinID:
XP_010779047
UniProt:
A0A6I9NS02
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
LLSCLTPSLSLSPRGSDCSRKVKNVLITIYWLGRAANGCTSYNGPTLDLKEFDGLLSQMR
KEAEEAESPIRSIRDSGYIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVL
VPRGSSDGELAVLQLLRAPSSLSFFFLRRGVGTYPLWLLLLGRYWLKGMAVRGSLMDVRR
VDMSSLRTSGIFLMITRQQCILVCFAFCSTPARSCSEEFFHHSTTPAAKSAAASPVASGK
HPPVSEPEEAAVRKGAAGVPLAADAEKQVGQTLTSPNTTNPPHFLPVPAAVATTDTSRRK
GRALSESGDPKEGSTLPESGLPATFSRTHSVSDDPQSVSMIDMRDEEEAMLQPHSQVRHE
LMLNQYNEMKEEDDHWQDDLARWKNRRRSISQDLIKKEEERKMMEQLMSGEICTSHRRKS
IKTYREIVQDKERRELELREAYRRARTPEEASAILQHYAQRFSISESVMERLQLPNILDR
SISADPSLPISSFPISLSPMTPDPFDVDPHGPLRYLRQQSAPAPKFTSTLEARVEEFPKE
PSHQRPQIRSRSSEPPSNRTLSPKPVPLLTPKPYFQPRPSAGEPWPSKADALLRVNGDVG
SGDVFTTPERQGRESPPQFQASPSIMSSSTVDVPSSAASQTHTSTRGGSPVATKAREEQS
GTEPASKDAQEQKVIENLTQPSRPTSLPSELQKPEESFEKTGSQAAAEEKSNAAAQQAPP
AEAKQEQQTEPSGQNVSNLAPSGVSTKHSQPIILQTIVPSSLEASQRRGNVPSLAAPESF
EYHPPRETAGVCLVVCEWWLVVIVCMNTCVVCVFLHVCVGVYQVSGPGLPQVRRGDRWSW
DPDEERKRQERWQQEQERMLQEKYRREQEKLKEEWEKAQREVAEEGRKYHEEERRILEET
VAPLTPRSSALTSPTRGEVSSSSEPQDTIVRSLADWERKQELLESQLRGSTESVEWKRRE
NDRTSDISTADDSMKTARSLLSQSSSQADALGQSLQNGQKLPATTNKTSTPVKKPEETPA
DSNKLSKAAGDRRSAPIENNMCRSSSKNPAACSPPPDTLPPAPNRSVSGKKLCSSCGQAL
GKGAAMIIETLSLYFHIQCFKCGVCKGLLGDTTTGTDVRIRNGLLNCHPCYTRSRSAGQP
TTL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
ttgctctcgtgtctcactccgtctctttctctatctcccaggggaagtgactgcagccga
aaagtcaagaatgttctgatcaccatctactggttgggtcgtgctgccaacggctgtacc
tcctacaacggtcccacgctggacctgaaagagtttgacggcctgctgtcacagatgcga
aaggaggcggaggaggcagagagcccgatacgcagcatccgggacagcggctacatcgac
tgctgggactctgagcgcagcgactccctctccccgccccgccacggccgcgaggactcc
ttcgacagtctggactccttcggctcacgctcacgacagaccccgtcgccggatgtcctg
gtcccccgcggcagcagcgatggtgagctcgcagtactccagctcttgcgcgccccgtcc
tctttgtcgttctttttcttgcggaggggcgttggcacgtatccgctctggttgctcttg
ttgggcaggtactggttgaagggcatggcggtgcgcggctcgctgatggacgtccgccgt
gtcgacatgtcgtccttacgcacgtctggcatcttcctgatgataaccaggcagcagtgc
attttagtttgctttgctttctgcagtactccagctcgctcgtgctctgaggaattcttc
caccattcgacgactccggcggctaaatctgccgcagcgagccccgtcgcctcggggaaa
catccacctgtgagcgagccggaggaagcggctgtgaggaagggagccgctggtgtcccg
ttggccgcagatgcagagaaacaggtcggccaaacgctgacctctcccaacaccacgaat
cccccgcacttccttcctgtgcccgctgccgtggcaacaaccgatacaagccggcggaag
ggacgggcgctgagcgaaagtggcgacccaaaagaaggaagcactttgccagagagcggt
cttcctgcaacattcagccgcacacacagtgtgtcagatgacccacagagtgtgagtatg
attgacatgcgagatgaggaggaggccatgttgcagccccacagtcaggtgcgtcatgaa
ctgatgctcaaccagtacaacgagatgaaggaagaagacgaccactggcaggatgacctg
gctcggtggaaaaatcggaggaggagtatctcccaggacctgatcaagaaggaggaggaa
cggaagatgatggagcagttgatgtcaggagaaatctgtacctcccatagaaggaaaagc
atcaagacatacagagagatagtgcaggacaaggagcgtcgtgagcttgagctgcgggaa
gcgtacaggagagccagaactccagaggaggcgtcggccatcctccaacattacgcccag
cgcttctccatcagtgaatcggtcatggagcgcctacagttgccaaatatcctggaccgc
agtatatctgctgatccctctttacccatctcatccttccctatctccctctccccgatg
acccctgacccctttgacgttgacccccacgggcccctgaggtatcttcgacagcagtcg
gccccggctcctaagttcacgtctacactggaggcgcgggtggaggagtttcccaaggag
ccctctcaccagcggcctcagatccgctcccgctcgtctgagccgccgtccaacagaacc
ctgtcgcccaaaccggtgcctttgctgacgcccaagccttacttccagccccgaccctca
gcgggggaaccatggcccagcaaggctgatgctttgctccgggttaacggcgacgtagga
agtggtgacgttttcaccactcctgagaggcaaggacgggaatcccctcctcagttccag
gcgtctccttccatcatgagcagcagcactgtagacgttccctcgtcagcagcctcacag
acacacacctcgaccagaggaggaagcccagtggccacgaaagccagggaggaacaaagt
ggcacagaaccggcttctaaggatgcacaagaacagaaagtcattgaaaatttgacgcaa
ccaagccggcccacatcactcccatcggagctgcagaagccagaagaaagctttgagaag
acaggaagtcaggctgctgcagaggagaagtcaaatgctgcagctcaacaagcgcctcct
gcagaagccaaacaagaacaacaaactgaaccatctggccaaaacgtctccaacctcgcc
ccgtcaggagtcagcacaaagcatagtcagccaatcattttacagacaattgtgccaagt
tccctggaggcgtcacagagaaggggaaacgtaccgagcctagccgcacctgagtcattt
gaatatcacccgccgagggaaactgcaggagtgtgtttggttgtgtgtgaatggtggttg
gttgtgattgtgtgcatgaatacgtgtgtggtgtgtgtatttttgcatgtgtgtgttggg
gtctatcaggtgtcagggccggggttgccccaggtcaggcggggggaccgctggtcttgg
gacccggatgaggagcgaaagcgtcaggaaaggtggcagcaagagcaggagcgcatgctg
caggaaaagtaccggcgtgagcaggagaagctgaaggaggagtgggagaaagcccagagg
gaggtggcagaggaggggaggaagtaccacgaggaggagcgtaggatactggaggagacg
gtggcgcctctgactccccgctcctccgccctgacctctccaacccgaggggaggtctcc
tccagctccgagcctcaggacaccatcgtgcgctcgctggccgactgggagcgcaaacag
gaactgctggagagccagttgagggggagcacagaaagtgttgaatggaaacggagggaa
aacgacagaaccagtgacatcagcactgctgacgacagcatgaaaacagccaggagcttg
ttgagtcagagcagcagtcaggcagacgctctcggtcagagtctgcagaacggccaaaag
cttccagcgacgacgaacaaaacctcgactcctgtgaagaaaccagaagagactccagcg
gacagcaacaagctcagcaaggctgcaggagacaggaggagtgctcccattgaaaataac
atgtgccgcagctcatcaaaaaaccccgcagcatgctccccacctccagacactctgcct
ccagcgcccaacaggtctgtcagtgggaagaagctgtgctccagctgtgggcaggcgtta
gggaagggggcggccatgatcatagagaccctcagtctgtacttccacatccaatgcttt
aagtgcggggtgtgtaagggactgttaggagacacgaccacggggacggacgtccggatc
agaaacggcctcctcaactgccacccgtgctacacccgctcccgctcggccggacagcca
accacgttgtga
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