KEGG   Notothenia coriiceps (black rockcod): 104953841
Entry
104953841         CDS       T04920                                 
Name
(RefSeq) protein transport protein Sec31A-like
  KO
K14005  protein transport protein SEC31
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    104953841
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncc04131]
    104953841
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ncc02044]
    104953841
Membrane trafficking [BR:ncc04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    104953841
Secretion system [BR:ncc02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   104953841
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_Prp19 WD40_WDHD1_1st WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_EIPR1 TPR_Sec16 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_DCAF12 Prp18 MukF_M Beta-prop_SCAP SMAP
Other DBs
NCBI-GeneID: 104953841
NCBI-ProteinID: XP_010779168
UniProt: A0A6I9NWF3
LinkDB
Position
Unknown
AA seq 1220 aa
MRLKEIQRTAHQAWSPAEHHPIHLALGTSAQQLDASFNTTSALEIFEVDFSDPSLEMQLK
GSLPTSNRFHSIVWVNYGMGEDGTGGRLVAGSENGTLTVYNPEVIMSSGAEAVIGQSDKH
TGPIRALDFNPFQSNLLASGANDSEIYIWDLNNFSSPMTPGAKTQPAEDISVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHYSGMLWHPEVATQLVLSSEDDRMPVI
QMWDLRFATSPLKVFENHTRGILSMSWSQADPELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDIQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTADTISSSFDAMDPFGT
GQVLPPLQVPQPVVQDTIVSPLKKPPKWVRRPVGASFAFGGKLVTFENPKPAPVQSPQPI
PRQVFVSQVTTETELLQRSRELQAALQSGSFNSYCQAKIQSAKSDAEQDIWKFLLVNFED
EARVKFLRLLGFSKDELERKISKCLGKSFQHNGHGVDAKDLAQKMQQLSTERANEGDAAT
PSSVSPADFFSQTPKENSNFQIPVSCDTDGLISQALLVGNFEGAVDLCLNDGRYAEAILL
SISGGEELLKKTQQKYLSNQKNSISMLISSVVTQNWSDIVQSCELDNWKEALAALLTYAH
PEDFARLCDTLGGRLEHERTEKRCLQACLCYICSGNIEKLVECWALHRDCASPLGLEDLV
EKVMMLRKSIERLRNSEVVVQSPILAEKLTCYAGILAAEGSLATAMTYLPENSDQAGITM
LRDRLFHAQEEAAGGQQPPNSFNRANVSTAKPTPAAQAPAPKAQMMSQYQPPAPPQAPQQ
QQPPMPSFYTPQTPTNSGPGLPPFSHVPPPSSTRPASRPPYPQQPAPAPGFLPHQPFQPQ
RMPGGGPSGFPPPGPSMPAANLSGPQLSPPSSAPRGLPPMPSPGVPPTSFMPSTSLPSGP
ISPSSQPGAQVPMYPGGLHNQGPAPPMAPGPYAPLGSGYPQGGPGAPAVKPFSAPPVAPP
PTGFFPWLNSQSEYQGPHEGWNDPPAVRGGPRKKKVPENYTPPVPITAPVMGFPVEAPQP
RDHAQVPPGAPQEPSVQLLQQLPAERVEQKEIPAEHMVLRSTFDSLVQRCQLAAGDPQTK
RKLDDAGKRLGYLYDKLREQSLSHSILNGLHEISRCVASQNYQRGLEVHTQVVSSSNFSE
ISAFMPILKVLMTIANKLGV
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgaggctgaaagagatccagaggactgcccaccaggcgtggagtcctgccgaacaccac
cctatccacctggcattgggaacatcagcacagcagctggatgcctcttttaataccaca
tcagccctggagatatttgaggtggatttctctgacccatctttagagatgcagctcaaa
gggtcattacccacgtcaaacaggtttcacagtattgtctgggtgaattatggaatggga
gaagatggtactggagggagactggttgctggcagtgaaaatggcacattaactgtatac
aacccagaggtcataatgagctccggtgcagaggcagtaatcggacagtctgacaaacat
actggacccatccgagcactcgatttcaacccgtttcagagtaatctccttgcttcaggt
gcaaatgattcagagatatatatctgggatctgaacaactttagcagtccaatgacacca
ggagcaaagacacagcctgctgaagacatcagtgttgtgtcctggaacagacaggtacag
cacatcctggcctctgccaaccccagtgggaaagcggttgtttgggatctgagaaagaac
gagcccatcatcaagatcagtgaccacagcaacaggatgcattattcaggaatgctctgg
caccctgaggtggccactcagttggtgttatcctctgaggatgatcggatgccagtcatc
cagatgtgggacctccgttttgctacatcccctcttaaagtctttgagaaccacacaagg
ggaattctgtccatgtcctggagccaggcggaccccgagctcctgctgagtagtgctaaa
gacaacaggatcctctgctggaatccaaacactggagaggttatttacgagcttccaaca
acaaaccagtggtgtttcgatatccagtggtgccccaggaatccggccctgctgtcagct
gcctcattcgatgggaggatcaccgtgtactctgtgatgggagggagtctgaaggctcag
cagcaaagcacagctgatacgatatcttcctcatttgatgcaatggatccctttggcaca
gggcaggtgcttcctcccctgcaggttcctcagcctgtagtgcaggacaccattgtctcc
cctttgaagaagccccctaagtgggtgcgcaggccagtgggggcttcctttgcttttggt
ggaaagctggtaacctttgagaatcccaaaccggctcccgtgcagagcccccagcccatc
cccagacaagtgtttgtgagccaggttaccacggagacagagttgctccagcgctccagg
gagctgcaggcggcgctgcagtcgggctccttcaacagctactgccaggccaagatccag
agcgccaagtccgacgctgagcaggacatatggaagttccttctggtcaacttcgaggat
gaagcccgtgttaaattcctcagacttttgggattcagcaaagatgagttggagaggaag
atttcaaaatgccttgggaagagtttccagcacaacgggcacggagtagatgccaaagat
ctggcacaaaagatgcagcagctctccactgagagggccaatgaaggtgatgctgcaacc
cctagttctgtttcaccggcagacttcttcagtcagaccccaaaggaaaactccaacttc
cagatccctgtatcatgtgacaccgatggtctgataagccaggctctgctggtgggtaac
tttgagggcgctgtggatctgtgtttgaacgacggccgctacgctgaagccatcctgctg
tccatcagcggaggggaagagctgctcaagaaaacccagcaaaaatacctaagcaaccaa
aagaacagcatctcaatgctcatatcatcggtggtgacccagaactggagtgacatcgtg
cagagctgtgagttggacaactggaaggaggctctcgctgcactgctgacctacgctcac
cctgaagattttgcccgtctgtgtgataccctgggtggcaggttggagcatgagaggaca
gagaagcgctgcctgcaagcctgtctgtgctacatctgctctgggaacattgagaagctg
gtggagtgctgggccctgcacagagactgcgcctcccctctcggcctggaggatctggtg
gaaaaagtgatgatgctgcgtaaatcaattgaacgcctccgtaacagcgaggtggtcgtg
cagagccccatcctggccgagaagctgacttgctacgccggcatcctggctgcagagggc
agtctggccaccgccatgacctacctgccggagaactcagaccaggctgggattacgatg
cttagagacaggcttttccacgctcaagaagaggccgccggtggacagcagcctccaaac
tccttcaacagagccaatgtgtccacagctaagcccactcctgctgctcaggcccccgca
ccaaaagcacaaatgatgagtcagtaccagccccctgcccctccccaggccccccagcag
cagcagcctccgatgccgtcgttttatactccacaaacgccaaccaactccgggcctggc
ctcccgcctttttctcacgtcccgccgcccagctccacccgccctgcctcgaggcctccc
tacccccaacaacctgctcccgctccaggtttccttcctcatcagccattccagcctcag
cgtatgccgggcggcgggccctcaggcttccctcctcctggtccttctatgccagctgct
aacctatcaggaccccaactatcgcctccgtcatcggcccccagaggcctgcccccaatg
cccagccccggggtgccaccgacaagcttcatgccatctacctctttaccctcgggcccc
atttcacccagctcccagcccggggcccaagtccccatgtacccaggaggcctccacaac
caggggcctgcaccccccatggcacctggtccctatgcccctcttggatcggggtaccca
caaggaggccccggagctcctgctgtaaagcccttctcggcccctcctgtggcccctcct
cctacaggattctttccctggctgaattcccagtctgaatatcaagggccccatgaaggc
tggaatgacccgccggcagtacgaggcggacccaggaagaagaaggtccctgaaaactac
acaccaccagtccccatcacggccccagtgatgggattcccagtggaggcccctcagccc
cgcgaccacgcccaagtcccccccggagccccccaggagcccagcgtgcagctcctccag
cagctgccggcagagcgggtggagcagaaagaaatccccgctgaacacatggtgctcagg
tccaccttcgacagcctggtgcagcgctgccagctcgcggcaggagacccgcaaacaaag
aggaaacttgatgacgcaggcaaacgcttgggatacctgtatgacaaactgagggagcag
tcgctctctcacagcatcctgaacgggctccacgagatcagccgctgcgtggcgagccag
aactaccagcggggcctggaggtccacacccaggtggtcagcagcagcaacttcagcgag
atctccgccttcatgcccatcctcaaagtgctcatgaccatcgccaacaagctgggcgtc
taa

DBGET integrated database retrieval system