Notothenia coriiceps (black rockcod): 104954006
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Entry
104954006 CDS
T04920
Symbol
kdm1b
Name
(RefSeq) lysine-specific histone demethylase 1B
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104954006 (kdm1b)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104954006 (kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
DAO
SWIRM
Pyr_redox_2
HI0933_like
Thi4
Pyr_redox
Pyr_redox_3
FAD_binding_3
FAD_oxidored
FAD_binding_2
NAD_binding_9
Lycopene_cycl
AlaDh_PNT_C
GIDA
2-Hacid_dh_C
MurD-like_N
TrkA_N
KARI_N
Motif
Other DBs
NCBI-GeneID:
104954006
NCBI-ProteinID:
XP_010779356
UniProt:
A0A6I9NY17
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MLSDADYSGNASGARRGKKRSSGESPGDGQTLRSSGRQSNVRVKRTNNPPPGQSKRKATD
TEEEDDQSEKKYRKCEKAGCSATYPVCFASASDRCAKNGYTSRWYHLSCGEHFCNECFDH
YYRSHKDGYEVFASWKKVWTSNGKSEPSLKAFMADQQLPFWVQCTKPDCRKWRQLTKEIQ
LTSSLAASYRCGMKFNNIKSEGPDHCSQPEDLRVAEVMDSWWHSMLILPPLFKESPASPF
LAAYYPDCVGMSPSGCPSNTSLSELRADHCRAVQPQIPGLCPYFQPFYQPNECGKALCVR
PDMMELDELYEFPEFSRDPTMYLALRNLILASWHKNCKEVLTSQKCALHIIVRGLVRVRC
VQEMDRVLHFMTRKGLINTGVLAVKTPLLPERHYTKNVIIVGAGASGLAAARQLQNFGTQ
VVVLEARERIGGRVWDDTSLGVTVGRGAQIVNGCVNNPIALMSEQMGIKMHKLGERCDLF
QEGGQVTDPAIDKRMDFHFNAILDVVSEWRKDKSQNQDTPLREKIKEVKKNFLQESGIQF
SELEEKVLQFHLSNLEFACGSTLDQVSARSWDHNEFFAQFSGDHTLLTKGYSALLHKLAD
GLDIRTKCPVQAIEYSGDVVKVTSSNGSQWTAQKVLVTVPLTLLQKNMIQFNPPLPDRKL
KAIHSLGAGIIEKIALQFPYRFWDNRIQGADYFGHIPPSPDKRGMFSVFYDMEPQGKQAV
LMSVITGEAVAAVRDMEDKQVVDECMKVLRELFKEQEVPEPVHFFVTHWTKDMWSQMSYS
FVKTGGSGEAYDILAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKMAAL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggatgcagactattctggaaatgcctctggggcccggcgaggaaagaagagg
agctccggggaatcgccgggggacggccagaccctgcgctcctctggaaggcagagcaat
gtccgggtgaagcgcaccaacaatccaccacctgggcagagcaaaagaaaagccacagac
acagaggaggaagacgaccagtccgaaaagaagtacagaaagtgtgagaaggccggatgc
tctgccacatacccagtctgttttgcaagtgcatctgacaggtgtgctaaaaatggatac
acatctcgctggtatcatctgtcgtgcggtgagcatttttgcaacgaatgttttgatcac
tactacagaagtcacaaagatggctatgaggtatttgcttcctggaagaaggtgtggacc
agtaatgggaaaagtgagcccagtctcaaagctttcatggcagatcagcagctaccattc
tgggttcaatgtactaaaccggactgcaggaagtggcgtcagctgaccaaggagatccaa
ctcacgtcttccctcgcagcatcgtaccgctgtgggatgaagttcaacaacattaaaagt
gaggggccggaccattgctcccaaccagaggacttgagagtggctgaggtgatggacagc
tggtggcattcaatgttgattttgccgccgttgttcaaagaaagtccagccagcccgttc
ctcgctgcgtattaccctgactgtgtggggatgagtccgtccggttgccccagcaacacg
tcactgtctgagctgagggccgaccactgcagagccgtgcagccacaaattccaggcctg
tgtccatacttccagcccttctaccagcccaatgagtgtggcaaggctctgtgtgtgcgg
ccggatatgatggagctggacgagctttacgagtttccagagttttcccgtgatcccacc
atgtatttggctctgcggaaccttattctggcctcctggcacaagaactgcaaggaggtg
ctgacttctcagaaatgtgccctacacatcattgtgcgggggttggtgcgtgtgcgctgc
gtgcaggagatggaccgggtgcttcacttcatgaccaggaagggcctcatcaacaccggc
gtgctggcagtgaagacgcctctgctgcctgagagacactacactaaaaatgttatcatc
gtcggtgccggggcttcaggactggctgcagcacggcagctgcaaaactttggaactcag
gtggtggtgcttgaggctagggagagaattggaggccgtgtgtgggatgacacttcactg
ggcgtcactgtaggccgaggagctcagattgtcaacggctgtgtgaacaaccccatcgcc
ctgatgtctgaacagatgggcatcaagatgcacaaattgggagagcgctgtgaccttttc
caagaagggggacaggttacagaccccgccatcgacaagcgcatggacttccacttcaat
gccatcctggacgtggtgtcagagtggaggaaggacaagtctcagaaccaggacacgccc
ctgagagaaaagatcaaggaagtgaagaagaactttctccaggagtcggggatccagttc
agtgagctggaggagaaggtgcttcagtttcatctcagcaacctggagttcgcctgtgga
agcacgttggaccaggtatcggcaagatcttgggaccacaatgagttttttgcccagttc
tcaggagaccacactttactcaccaagggctactctgctttactgcacaagctggccgac
ggcctcgacatccgcaccaagtgcccggttcaggccattgaatattcaggtgatgttgtc
aaagtgacctcctccaatggctcacagtggacagcacagaaggtgcttgttacagtccca
ttgactttgctgcagaagaacatgattcagttcaaccctccgctccctgacaggaaactg
aaagcaatccacagtctgggagccggcatcatagaaaagatcgctcttcagttcccttac
agattctgggacaacagaatccaaggggcggactactttggtcacatcccacccagtcca
gacaagagaggcatgttcagtgtcttctacgacatggagcctcaggggaagcaggctgtc
ctcatgtcagtcatcactggtgaagctgtggctgctgtgcgggacatggaggacaagcag
gtggtggatgagtgcatgaaggtcctgagggaacttttcaaagagcaggaggtcccagag
ccggtgcatttctttgtgacacattggaccaaagacatgtggtcccagatgtcctacagc
tttgtgaagacgggggggagcggagaggcctacgacatcctggctgaagacgtgcaggga
aaagtcttctttgctggagaggccaccaacagacacttccctcagactgtgaccggagcc
tacctgagcggggtcagagaggccagcaagatggctgctctgtag
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