Notothenia coriiceps (black rockcod): 104954055
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Entry
104954055 CDS
T04920
Name
(RefSeq) probable threonine--tRNA ligase 2, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104954055
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncc01007
]
104954055
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104954055
Enzymes [BR:
ncc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
104954055
Amino acid related enzymes [BR:
ncc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
104954055
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
104954055
Prokaryotic type
104954055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
104954055
NCBI-ProteinID:
XP_010779412
UniProt:
A0A6I9NTB5
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All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MAVTQLFRLVVCRSAARATLRVHRRYSQVCSALSERLRVFESLREKQGNKSQAEAAETRL
SIQLADGRTVKATAGVTTPLFIAQSSRVKGALVSKVNGELWELGRPLEVDCELQLLGFDT
DEGRQAAWRTGACVLSGVLQTVFGAEVCREGASELGLYCDHLLENSALSLSDVEEKCKQA
AALKLPLTRLELNTEEVRELFQNSKLRLQLVEEQMSGPTVTVYRCGDSLAVCDGPLLPHT
GLLKVFKTLQWDTCRVGGMSLVCIDPGRGRSFHSGHPLGRKYLQQDVVFVRGQFPVLSRY
KHTAIYQTCCHSHGVAFPGEKDKEEWEREREEARRRDHRRIGTDQDLFFFNDVSPGSCFF
LPKGAYIYNTLTDFIKSEYRRRGFNEVVTPTLYSTALWERSGHWEHYSEQMFTVTSEGSQ
TYALKPMNCPAHCVMFEQRVRSWRELPLRWADFGALHRNELSGALAGLTRVRRFCQDDAH
IFCTPDQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacacagctgtttagactggttgtctgtcgctcggcagctcgtgcgacactt
cgcgtgcacaggaggtacagccaggtgtgctcggctttatctgagcgactgcgggtcttt
gagtcccttcgagaaaagcaaggcaataagagccaagctgaagctgcagaaactcgcctt
agtatccaactggctgacggccggacagtaaaggcaacagcaggtgtcaccacacctctc
tttattgctcagagttcccgtgtgaagggagcgctggtcagtaaggtgaatggagagctg
tgggagcttggacggcccctagaggtagactgtgaactacagctgctggggtttgacaca
gatgaggggagacaggcagcatggcggacaggagcctgcgtcctgagcggagtgttgcag
acggtgttcggtgccgaggtgtgcagagaaggagcgtcagagctcgggctttactgcgac
catctactggaaaacagtgccttgtctctgagtgatgtggaggagaaatgtaaacaagcc
gcagcccttaaacttcctctgaccagactggagctgaacactgaagaggtccgagagctc
ttccagaacagtaaactgagactgcagctcgtggaggagcagatgagcggccccactgtc
acagtgtacagatgtggagacagcctagcggtctgcgacggccccctcctcccacacact
gggctcctcaaggtcttcaagacactacagtgggacacatgccgggttggaggaatgtcc
cttgtctgtattgatccagggagagggaggagttttcattctgggcatccactgggcagg
aaatatctgcagcaggatgttgtgtttgtcagaggccagtttcctgttctcagccgctac
aaacacactgccatctatcagacatgctgtcactctcatggtgtggcctttccaggagag
aaggacaaggaggagtgggagagggagcgggaggaggcgaggaggagggaccacagacgg
atcgggacggaccaggacctgttcttctttaatgatgtgagtccaggcagctgctttttc
ctgcctaaaggcgcctacatctacaacaccctcaccgacttcattaagagtgaataccga
aggcgaggattcaacgaggtcgtgaccccaaccctgtacagcactgcattatgggagcgc
tcgggccactgggagcactacagcgagcagatgttcactgtgacgtccgagggctctcag
acctacgctctcaagcccatgaactgtcctgctcactgtgtgatgtttgaacagcgtgtg
cgctcctggagggagctgcctctgcggtgggccgacttcggggcactgcaccgtaacgag
ctctccggagcgctcgcgggtctcactcgggttcgaaggttctgccaggacgacgctcac
atcttctgcacacctgatcag
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