KEGG   Notothenia coriiceps (black rockcod): 104954068
Entry
104954068         CDS       T04920                                 
Name
(RefSeq) protein HIRA
  KO
K11293  protein HIRA/HIR1
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ncc03036]
    104954068
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     104954068
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_WDR35_TULP_N HIRA_B Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_HPS5 WD40_like
Other DBs
NCBI-GeneID: 104954068
NCBI-ProteinID: XP_010779427
UniProt: A0A6I9NTD4
LinkDB
Position
Unknown
AA seq 628 aa
MASLKGYATCPMSGSKDRGGRILRFIGPSTVFGSSSKLANVEQWRCVTILRNHTGDVMDV
AWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGLTWDPVGKYIASQADDHS
LRVWRTMDWQMEANITKPFSECGGTTHVLRLSWSPDGQYLVSAHAMNNSGPTAQIVERDG
WKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSAQKPGCPYCCCAVGSKDRSLSVWLTSLK
RPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLDELGDPLNEEEKNSIHQN
IYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSIQANSGPGSAGPESSAPKLNSMMNG
ESLEDIRKTLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFNSAPILPSGSSMSNQL
TSQLSSDSSPGQASSLGLRPIHDPMLTSPPPNSATKGLEDGLKSSLLLTSASKIEPMKAL
DSRFTERSKATMGVTAVISSISGLMPLDRPKDGLSALKDLKSKDDTSSDSEDKMASINKN
LMLGKRKPELLIDVGEVVEKRKKGRPRKDKMAAPTAQPFTQITPTAEREPSRVAAPPPVA
ALKLPTPSIKKTFSLQVTCSVPGGYQIT
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggctagtttgaaaggatatgcaacttgtcccatgtcagggtctaaggacagagggggt
cgtattctacgattcatcggtccgagcacagtgttcgggtcaagcagtaagctggccaac
gtggagcagtggaggtgtgtcaccatcctgaggaaccacaccggagatgtgatggacgtg
gcgtggtctcctcatgacgtgtggctggcctcctgcagcgtggacaacaccatcgtcatc
tggaacgctcgcaaatttccagagatggtgacatgtctgcgaggacacactgggctggtt
aaaggtctgacgtgggacccggtggggaaatacattgcctcccaggccgacgaccacagc
ctcagagtgtggaggacaatggactggcagatggaggccaacatcaccaaacccttcagc
gagtgtggtgggacgacccacgtcctgcgtctgtcctggtctccagacggtcagtatctg
gtgtcggctcacgccatgaacaactccggtcccaccgctcagatcgtggagagagatggc
tggaaaactaatatggactttgtcggccaccgtaaagctgtcacagtggtgaaatttaac
ccaaagatctttaagaagaaacagaagaacggcagcgctcaaaaacctgggtgtccgtac
tgctgctgcgctgtcggcagcaaagaccggtcgctctccgtctggctgacctctctgaag
cgccctctggtggtcatccatgatctgtttgataaatcgattatggacatatcctggact
ctgacaggtctggggatgttggtgtgttcgatggacggcactgtggcctacctggacttc
tcactggatgaactgggagacccactaaacgaggaggagaagaacagcatccatcagaac
atctacggtaagagtctggccataaccagcacagaggctcagctctccaccaccatcatc
gagaaccctgagatgctcaaataccagcaggagcgccagaactcaatccaggccaactca
ggaccgggcagcgccgggccagaatcctcggcccctaaactcaacagcatgatgaacgga
gagtctctcgaggacatcaggaagaccctcctgaagaaacaggttgagacgagaactgca
gacggacgaagacgaatcacaccgctctgcattgctcagctggacactggggatttctct
cccgctctgttcaacagcgctcccatcctgccgtcgggctcctccatgtccaaccagctc
acctcccagctcagctcagactccagcccagggcaggcctcttctctggggcttcggccc
atccacgaccccatgctcacctcgcctccacccaacagcgccacgaagggcctggaggac
ggtctgaagtccagtctgctgctcacttctgcctccaagatcgagccgatgaaagctttg
gactcaaggttcacagagaggtcaaaggccacaatgggggtcacagccgtcatctcctcc
atctctggactcatgcctctggacaggcccaaagacggcctctccgctctgaaagacttg
aaatccaaagacgacaccagcagcgacagtgaagacaaaatggcctcgatcaacaaaaac
ctgatgttgggcaagaggaagcccgagctgctgatagatgtaggagaggtggtggagaag
aggaagaagggacggcccaggaaagacaagatggctgcacccaccgcccaaccattcact
cagataactcccacagcagagcgggagccaagcagggtggcagctccacctcctgtagct
gctctcaaactgccaacacccagtataaagaagaccttcagtctgcaggtaacatgctct
gttcctggaggttatcagatcacatga

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