Notothenia coriiceps (black rockcod): 104954150
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Entry
104954150 CDS
T04920
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104954150
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104954150
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
104954150
NCBI-ProteinID:
XP_010779524
UniProt:
A0A6I9NPA5
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAKPLDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDSEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKSLLKRDRFVFPSLLGDAEHLKGFSMDSFLIPGDKTR
AFFAPVSSSSSSSPSSFSLLEPVAQFSTGAVQRMVHEIPHALAAGALPYSAQSFGYQTAG
GLGALCCHGQHSHSHPSPSGPGYVVPCNCSAWSAAGLQPQVAYILFPGGVPKGGMDSYTS
PSSSV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctttagatcatatcaaaagacccatgaatgcgttcatggtgtggtccaga
ggccagaggaggaaaatggcccaggagaacccaaagatgcacaactcagagatcagtaag
agactgggcgcggagtggaagctgctctccgactcggagaagcgcccttacatcgacgag
gccaagaggctgcgggctcagcacatgaaggagcacccggactacaagtaccgaccccgg
cgcaaacccaagagcctcctgaagagggaccgcttcgttttcccgtctttgctcggggac
gcagagcatttgaaggggttttccatggactccttcctcatccccggggataaaaccaga
gctttcttcgctcccgtctcctcctcctcctcctcctccccttcttccttctcgctgctg
gagcccgtggcgcagttcagcaccggagctgtccagcgcatggtgcatgagatcccgcac
gctctggcggccggcgctctgccctacagcgcgcagagcttcggataccagactgccgga
gggctcggggctctgtgctgccacggacagcactcccacagccacccgtccccctccggc
cccgggtacgtggtgccgtgtaactgtagcgcctggtccgcagccgggttacagccgcag
gtcgcctacatcctcttccctggaggggtgcccaagggcggcatggactcgtacacttcc
cccagctccagtgtgtga
DBGET
integrated database retrieval system
