Notothenia coriiceps (black rockcod): 104954426
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Entry
104954426 CDS
T04920
Symbol
dscaml1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104954426 (dscaml1)
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
Other
104954426 (dscaml1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
C2-set_2
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Fn3_ROS1
Ig_6
C2-set_3
Sp38
Ig_SEMA-3_4_7A
Fn3_Dep-1_3rd
Fn3_VIN3
ChitinaseA_N
Lit
Motif
Other DBs
NCBI-GeneID:
104954426
NCBI-ProteinID:
XP_010779838
UniProt:
A0A6I9NYI0
LinkDB
All DBs
Position
Unknown
AA seq
2053 aa
AA seq
DB search
MWLVTLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPVAVQEYVSVVSWERDTVSIVPGNRFSLTSFG
ALYISDVQKEDALSTYRCITRHKYSGETRQSNGVRLSVMDPNESSPTILDSFQAGEVNAG
QSIELPCTAGGYPTPTVRWLKDGRPLPSDARWTRRLTGLTISDMRQEDSGSYACEVTNSF
GSKEVSGLLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTISWYSNTEPIVPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVSSFSERVVN
PGEPFSLMCGAKGAPPPSITWTLDDEAVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
EGMQLPDNHRQVVFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFTVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
ITINKKGDEVISTLKLNPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDTWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMEVILTPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKYAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSEPPQNVRAISVTSDEAVITWSEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGQAQWPLQKWGEMQNITTTREQVELRGLEKFTNYSVQVLAYTQAGDGVRSNVLYIQ
TREDLPGPPAGIKAVPSSPNSVVVSWLPPLKPNGVIRKYTIYCSSPGSLQPAPSEYEANP
EMLFYRITHLTRGKQYHIWSAAVTTAGRGNISSKVTVEPAGKVPGKILSFGGTVTTPWMK
EVRLPCGSVGEPAPTIKWTKDSDDTAIPVTADSQRQILPNGTLVLRSVKAEDSGYYTCTA
TNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFNKDQ
PLLTHINSTHAGINLQGWTSGGCPITDMMLDFRPKGTWAWQSLKANSTSQLFLSELREAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIRSARGEGDDVKKLFSIGSPVILVTLG
VALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPG
TNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHGITATESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRRQNVAVPIPHRANKSEFCNLPL
YMKTDPFFRKQGELHDPCPVVPPREASIRSLTQRAYHTQGRHKTLDPSKQQVLTLGHSGL
SSLGASSGTSTLPQRTLTMPSSNTAATASTSSTSSNCNKVGGSRDSLLESSSSALGRLQK
QSAGAYSKSYTLV
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttactcctgctgtactctctccaagaagtacacagtgaggatgtg
ggctccaccaggctgtactttgtgaatgcctccctgcagagggttacctactccagctcg
gtgggggtgtccctgccctgtccagcaggcggcacccccagtgccatactgcgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgacacgtgcacgccaatgga
accctgcagctgtaccccttctcgccctccgcctacaacagctacatccacgacaacgac
tacttctgcacggccgagaaccaagccggcaagatccgcagccccaacatccgcatcaaa
gctgtttttagggagccctacacggtgcgggtggcggaccagcgctctatgcggggaaac
gtagccgtgttcaagtgcctcatccccgtggctgtgcaggagtacgtcagcgtcgtgtcc
tgggaaagggacacggtttccatcgtaccaggtaacaggttctcgctgacctccttcggg
gctctttacatctccgatgttcagaaggaggacgccctctccacataccggtgcatcacc
agacataagtacagcggcgagacgcgccaaagcaacggagtcaggctctctgtaatggac
ccaaacgagtcctcccctaccatcctggacagtttccaagcaggcgaggtgaacgcaggc
cagagtatcgagctcccctgcacagcgggagggtatcccacccccacggtgcgctggcta
aaagacggtcgcccactcccctcggacgcccgctggacacggcgtttgacggggctgacc
atcagcgacatgaggcaggaggacagcggcagctatgcatgcgaggtcaccaacagcttt
ggctcaaaggaggtgtctggactgcttcacgttatagatcccctacgagtcaccctgtcc
cctaagaacctaaagactggcatcagcagcacgctgttcttcacctgcactgtggagggc
tctccagaatacaccatcagctggtacagcaacacggagcccatcgtccccgaccagcac
atctccatccaggggcagcacaacgacaccttgcagatcactgcggctcagaagttccac
tccggggcctaccagtgcttcgcctcccgaaagggccacaccgctcaggacttttccatt
attctgctagaggatggtactcctcgtattgtgtcttccttcagcgagcgcgtggtgaac
cccggcgagcctttctccctcatgtgtggcgccaaaggagccccgcccccctccatcacc
tggacgctggacgacgaggccgtggtgcgagactccacctacaagaccagccagtacacg
ctgtcggacggcctgaccgtgtcgcacgtcaacgtcagcagcccgctcatccgggatggg
ggagtgtatcgttgcgtcgcacgcaactcggccggtagcgccgagtaccaagcgcgcata
aacgtaagaggtccaccccgaatcagacccatgcgggacatcaccgctgtggcgggcagg
aacacctacataacgtgccgggtgattggctacccgtattactcaatcaagtggctgaag
gaaggcatgcagctgcccgataatcatcgtcaagtggtgtttgagaacggcacgctgagg
ctgacggacgtgcagaagggcgcggacgagggcacctacttgtgtagcgttctgatccag
ccccaggtgtcaatcaaccagaccgttcacgtcactgtcaaagtgccgccgctcatccag
cccttcgacatcccctctacctcagtggggaagctcatgtacatcgcctgtgtggtgtca
tctggggacatgcccatacgcatcacctggcacaaagacggccagctcatcgtgccaggc
tccgcctctggcgtcgctatagagaccaaagagttcatgagctccctgcaaatatccaag
gtgacactgaagcacaacggaaactacacctgcatcgccagcaacgccgccgccaccgtc
agctgggagaggcagctgatagtaactgtgcctccacgcttcacggtgcagcccaacaat
caagactgcatctacggcaaagctggagttctcaactgctctgtggagggttacccacct
ccaaaagtcatgtggaagcatgcaaaaggtgtaggaaaccctcagcagtaccacccagtc
cctctcactggccgtatccagatcatgtcaaacggctctctgctcatccgacacgtgctg
gaggacgaccgaggctactacctctgccaagcctctaacggcgtgggctcagacatcagt
aagagcatgatcctcaccgtcaaaattcccgccatgatcaccagccaccccaacaccaca
atggcgaggaagggccaaaccaaggagctgaactgcacggcgcgcggagagcaacccata
atcatccgctgggagagaggggacacagtcatcgacgccgagagaaacccccgctattcc
ataaccatcaacaagaagggggacgaagtcatctccacgcttaagctgaacccggccgag
cgaggggattctgtcttcttctcctgccacgccatcaactcctatggagagggtcgaggg
ctcatccaactcactgtgcaagaaccaccagacccccctgaactggaggtgagggaggtg
aaggacaggagcatgaacctgcgctggatccaaaggttcgatggaaacagtatcatcacc
agctatgacatcgagtacaagaacaagtcagacacctgggatcacatgtacacaaccagg
aacatctcccccaccaacaaccaggccaacatcgtggagttgcatccggcctgcgtttac
agcatccgcatgtactcctacaacaagataggccgcagcctccccagcaaagagctcacc
atcagtaccgaggaagcacctcctgatgggccgccgatggaagtcatcctcacaccgatg
acatctcagagcatacgtgttacatggagggctccgaagaaggagttgcagaacggggtg
atccgaggctaccagatcggttacagagagaacggtccgggcagcaacggccagtacagc
atcgtggagatgaaagctacgggggacagtgaagtgtacaccttggacaacctgaagaag
tatgcccagtacggggtagtggtccaggccttcaacagggccgggacaggtccatccagt
actgagatcaacgccaccacgctggaagatgttcccagcgagcctcctcagaacgtgcga
gccatctccgtgacgtcggacgaggcggtgatcacgtggtcagagcctccacggctgacg
ctgcacggtgtgctgaaaggctaccgcgttgtgttttggtccctcttccccgacggaggt
gggtgctgtgggggccaggcccagtggccattgcagaaatggggggagatgcagaacatc
accaccacacgggaacaggtggagctgcgagggctcgagaagttcaccaactacagcgtc
caggtgctggcctacacacaggcgggggacggggtccgcagcaacgtcctgtacatccag
actcgcgaggaccttcctggtccaccggcgggcatcaaggcggtcccctcctctccgaac
agtgtggtcgtgtcctggttgccgccactcaaaccaaacggtgttatccgcaagtacacc
atctactgctccagcccggggtctctgcagccggcacccagcgagtacgaggccaaccca
gagatgctcttctaccgcatcacgcaccttacccgcggtaaacaataccacatctggtct
gcagccgtgacaaccgctggccgtggcaacatcagctcaaaggtcacggtggagcctgct
gggaaagtcccgggtaagatcttgtccttcggcggcacggtgaccacaccctggatgaag
gaagtgcgtcttccctgcggctccgtgggagaacccgctcccacaattaaatggaccaaa
gacagtgacgacactgccatccctgtgacggcggacagtcagcggcagatcctacccaac
ggcacactggtgctgcgttcggtcaaagcggaggattctgggtactacacctgcacggcc
actaacactctgggctttgacaccatcatagtcaacctggtggtgcaagttcctccagat
cagcctcgcttgaccgtctccaccacctccacctcctccatcacccttgcttggatccct
ggggacaacgggggaagctccatcagaggatttgtgctgcagtactcggtggacaacacg
gaggagtggagggacgtgttcatcagctccagtgagcgctccttcaggctggacaacctg
cgctgtggaacctggtacaaggtcaagttggccgccaagaacagcgtgggctcaggacgc
atcagtgagatcatcgaggccaagacacatggaagagaaccggtattcaacaaggaccag
ccgctgctcacacacatcaactccacccacgcggggatcaacctgcagggctggaccagc
ggcggctgccccatcaccgacatgatgctggacttcagacccaaaggcacctgggcgtgg
cagagcctcaaagccaactccacctctcagctgttcctcagcgagctgcgtgaggccacc
tggtacgagctgaagatgaaagcctgcaacagcgccggctgcggaaaccagagctcccag
tttgccaccaccgactacgacggcagtacaatccctcccattagatctgctcgtggagaa
ggggatgacgtgaagaagctgttctccatcggctctcccgtcatcctggtcactctgggc
gtcgctttgctttttattatccgcaagaaacgcaaggagaagaggctcaaacgacttaga
gatgctaagagccttgcggagatgcttatcagcaagaacaatcgcagtatagacactccg
gtgaagggccctcctcaagggccgaggctccacattgacatcccacgtgtccagctactc
atcgaggacaaggaaggaatcaaacaaataggagaggacaaggcagcagtgcctgtgaca
gacactgagttcagccaatcagtgaatccgcagaacttctgcacaggcgtgtctctgcac
caccaggccctcatccagaactcagggcctttgatcgacatgtccgacatccgcccaggc
acgaaccccgtgtccaggaagagtataaagtccgcccacagctccaggaacagatactcc
agccaatggacgctgagccggccgagtcagagccaatcgacggcctccgcccgaactctg
acctccgactggcggaccatgggctctcacggcatcaccgccacagagagcgacagctac
agcgccagcctttcgcaggacacagataagggtcggaacagcatggtgtctacagagagc
gcctcctccacctacgaggagctggcgcgggcgtacgagcacgccaagctggaggagcac
ctgcagcacgccaagttcaccatcaccgagtgcttcatctctgacagctcgtccgaccag
atgaccaccggcaccaacgaccccgcggacagcatgacctcgctcagcacgccgtctgaa
cccggcatctgccgcttcaccgcctcgccgcccaaaccgcaggactacgaccgccggcag
aatgtggcggtgcccattccccaccgcgctaataaaagtgaattctgcaacctccccctc
tacatgaagacagacccattcttccgtaagcaaggggagctgcacgacccctgcccagtg
gtgccgccgcgggaagcctccatccgcagcctgacgcagcgggcgtaccacacccagggc
cgccacaagactctagaccccagcaagcagcaggtcctgacgctgggccactccgggctg
agcagccttggggccagctcgggcacctccaccctcccccagaggactctcaccatgccc
agctctaacaccgcggccacggcctccacctccagcacgagcagcaactgcaacaaggtg
ggcggctccagagactcgctgctggagagcagctcctccgctctggggagactgcagaaa
cagagcgcgggggcgtactccaagtcgtacacgctggtgtag
DBGET
integrated database retrieval system
