Notothenia coriiceps (black rockcod): 104954514
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Entry
104954514 CDS
T04920
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104954514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104954514
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104954514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
104954514
NCBI-ProteinID:
XP_010779933
UniProt:
A0A6I9NYT0
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MIAAQELHTDFQFSQEAESQWSSDTDFEDPDGKDAKTAKGMAAKKGKKAPGDKAKGGGAR
KAPGAGRVNGHHQENGMENMTLFEVVKMGKSATQSVVDDWIEAYKQDRDVALLDLINFFI
QCSGCKGAVSGEMFRNMQNSEIIRKMTEEFDEDSGDYPLTMSGPQWKKFRISFCDFIAVL
VRQCQYSIIYDEYMMDTIISLLTGLSDSQVRAFRHTSTLGAMKLMTALVNVALNLSINMD
NTQRQYEAERNKVIAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDSIA
EIRAICIEEIGMWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCVSALQGLFYSRELGA
RLELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLQSSDEVLTAEDCESVYHLVYSAHR
PIAVSAGEFLFKKLFSHRGPEEEGLPRRGRQSLNGGLIKTTVFFFLESELHEHGAYLVDS
LWECGSELLKDWETMISLLLDEPAAGEEALTDGQETALVEIMLCAIRQACECHPPVGRST
GKRVLTAKEKKTQLDDRTRITEMFAVALPLLLAKYCVDIDKVTNLLQIPKYFDLDIYTTG
RLEKHLDALLRQIWEVQDKHTDIEVLEACSTTYHYLSNEEFTIFNRVNIARSQLLDELVD
KFNRLLEDFLQEGEEPDEDDAYQVLSTLKKISAFHNAHDLSKWDLFTSIYRLLNTGLQNG
DMPEQIVIHSLQCTHYIILWHLAKVSDGSSIKGDMVTLSKQMRAFCLMCQRYLNGINNAV
KEQAFTILCDLLLIFSHQIMSSGREQLEPLVFMPDSSLHADLLNFILDQVFIDQDDDNNS
TDGQQDDEASKIEALHKRRNLLAAYCKLITFNVVEMNSGADVFKQYMRYYNDYGDIIKET
MSKTRQIDKIQCAKTLVLSLQTLFNEMLSELGFNVDRSTSAFCGIKELARRFSLTFGLDQ
VKTREAIAMLHKDGIEFAFKEPSPQGPGSPPLNLSFLDVLSEFSSKLLRQDKRTVHTYLE
RFMTVQMALQREDCWLPLISYRNSLQARGDDDTMSVLSGISSRGSTRSKKAKPATASKRK
CPEAEESSCSSSDAVWMNREQNAQTPVMMHSPVMMHSPHLTSTVLRDPKKMRPEDSYTGA
YSMPTEQLPHQPVPLQQQQQPHHHHQAAMDYNTQVTWMLTQRQQAEAHQQQERVSMQYAK
MRNHMQQAM
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcgcaggaattgcacacagactttcaattttctcaagaggcagaatctcag
tggtcctcagatactgactttgaggatcctgatggcaaagatgcaaagacagcaaagggc
atggcagccaagaaggggaagaaggcgcccggagataaggccaaaggtgggggggcaagg
aaggcccccggtgctggcagggtgaacggccatcatcaggagaacgggatggagaacatg
acgctgttcgaggtggtgaaaatggggaaaagtgccacacagtctgttgttgatgactgg
atcgaggcatacaaacaggacagggatgttgctctcttggacttaatcaacttcttcatt
cagtgctctggttgtaaaggggctgtgagtggagagatgttcagaaatatgcagaactct
gaaatcatccgaaaaatgacagaggagtttgacgaggacagcggtgactatccgttaacg
atgtcagggccacagtggaagaagttcaggataagcttctgtgacttcattgcagttctg
gtgcgtcagtgccagtacagcatcatttacgatgagtatatgatggacaccattatttca
ctgctcaccggcctgtctgactctcaggtccgggccttcagacacacaagcacactcgga
gcgatgaagttgatgaccgccttggtgaacgtcgctctcaacctgagcatcaatatggac
aacacgcagagacagtatgaagcggagaggaacaaggtcattgcaaagagagccaatgac
aggctggagctcctgttacagaagcgtaaagagcttcaagaaaatcaagatgaaatcgag
aacatgatgaatgcaatttttaaaggagtgtttgttcacagatatcgtgattccattgct
gagatccgagctatttgtattgaggagattggaatgtggatgaagctgtacagcgacgcc
ttccttaacgacagctacctgaagtatgttggctggacaatgcatgacaagcaaggggaa
gtgcgcctgaagtgtgtgagcgccctgcagggcctgttctacagccgggagctgggtgcc
cgactggagctcttcacaagtcgcttcaaggaccgcatcgtgtctatgactctggacaag
gaatatgatgttgcagtgcaagccattaaacttctgactctggtcctgcagagtagtgat
gaggttctgacagcagaggattgtgagagcgtttatcatctggtttactcagcacatcga
cccatcgctgtttcagcaggagaatttctcttcaagaagctcttcagccaccgtggccct
gaggaggagggattacccaggaggggcaggcagagcctcaatggaggccttatcaaaact
actgtgttcttcttcttggagagcgagctccatgagcacggggcttacctggtggatagc
ctgtgggagtgtggctccgagctgctgaaggactgggagacgatgatcagcctgctgctg
gacgagcccgcggcaggagaggaggcactgactgatggccaggagacggccctggtggag
atcatgctctgtgccatccggcaggcctgtgagtgccaccctcctgtcggcagaagcaca
gggaagagggtcctgactgcgaaggagaagaaaacgcagctggatgatcggacacggatc
acagagatgtttgcagtcgcgctgcctctgttgttggcaaagtactgtgttgatatcgat
aaggtgaccaatttgctacaaataccaaagtactttgatcttgacatctacacaactggc
cgtctggaaaagcatttggatgccttgctgcggcaaatctgggaggtccaggataagcac
acagacatagaggtcctggaggcctgctctaccacctaccactatctctccaacgaagag
ttcaccatcttcaaccgcgtgaacatcgcccgctcccagctgctcgacgagctggtggac
aagtttaacagactgctggaggacttcctgcaggagggtgaagaaccagatgaggatgat
gcctaccaggttctatccacactcaagaagatcagcgctttccacaatgcacatgacctc
tctaagtgggatctcttcaccagcatctaccggctgctgaacaccggtctgcagaacggg
gatatgcctgagcagattgtgattcactcattgcagtgcacacattacatcattctgtgg
cacctagcaaaggtttcagacggcagctcaataaagggtgacatggtgaccttgagcaag
caaatgagagctttctgcttaatgtgtcagcgttacctaaacggcatcaacaacgcagtt
aaagagcaggccttcaccattctatgtgatctcctactgatcttcagtcaccaaattatg
tcttcaggccgggaacaactggagcctctggtctttatgccagactcctctctgcatgct
gatctgctcaacttcatcctagatcaagtgttcattgatcaggatgatgacaacaacagc
acagatggacagcaggatgatgaagccagtaaaatcgaggctctgcacaagagaagaaac
cttctagctgcctactgtaaattaatcactttcaatgtggtggaaatgaacagcggcgca
gacgtattcaaacagtacatgaggtattataatgactacggagatatcatcaaggagacg
atgagtaaaacaagacaaatcgacaagatacaatgtgcaaagacacttgtattgagccta
caaacgttattcaatgagatgttgtctgaacttggcttcaatgtcgaccgctcaacatca
gccttctgtggcataaaagagctcgcccgacgcttctccttgacttttggcttggaccag
gtgaagaccagggaggctattgccatgttgcataaggatggaattgagtttgcttttaag
gaaccgagtccccaaggaccagggagtccacctctcaatctctctttcttggatgtcctg
agcgagttctccagcaaactgcttcggcaggacaagagaacagttcacacatacctggag
cgcttcatgacggttcagatggccctgcagcgagaggactgttggctgcccctcatctcc
tacaggaactccctgcaggccagaggggacgatgacaccatgtctgtcctcagtgggatt
agcagtcgggggtccaccaggagcaagaaggccaagccagccactgctagcaaacggaaa
tgtcctgaagcagaagagagcagctgcagcagcagtgatgcagtctggatgaaccgtgag
cagaacgcacagacgccagtgatgatgcattcgccagtgatgatgcattcgccccacctc
acctccaccgtgctgagggatccaaagaagatgaggccagaagacagctacaccggcgct
tacagcatgccgacagagcagcttccccatcagcctgtgcctctccagcagcagcagcag
ccacatcaccatcatcaggctgccatggattacaacacacaggttacttggatgttgaca
cagaggcaacaagctgaggcccatcagcagcaagagcgggtcagcatgcaatacgccaag
atgaggaaccacatgcagcaagcaatgtaa
DBGET
integrated database retrieval system
