KEGG   Notothenia coriiceps (black rockcod): 104954540
Entry
104954540         CDS       T04920                                 
Symbol
ptpn13
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 13 isoform X1
  KO
K02374  tyrosine-protein phosphatase non-receptor type 13
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    104954540 (ptpn13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ncc01009]
    104954540 (ptpn13)
Protein phosphatases and associated proteins [BR:ncc01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Non-receptor PTPs
    104954540 (ptpn13)
SSDB
Motif
Pfam: PDZ Y_phosphatase PTN13_u3 PDZ_6 FERM_M PDZ_2 FERM_C FERM_N Tc-R-P KIND DSPc PTP-SAK PTP-NADK PTPlike_phytase RA_2 SNX17-27-31_F1_FERM
Other DBs
NCBI-GeneID: 104954540
NCBI-ProteinID: XP_010779959
UniProt: A0A6I9NQC8
LinkDB
Position
Unknown
AA seq 2576 aa
MHVSLAEALEVRGGPLQEEEVWAVLSQSAESLQELFHKDPTAMGFIISPWSLLLMPSGNI
SFTDEYVTQQDLRAFTAPEVLEGLSLTSISDIEKMHMYSLGMTLFWGADYEIPQSQPMKL
GEHLNSLLLNMCDDITLSRMSLRTVLDICSKHIRNSSCDPPFSYIRKLVRLVLGSLSQLD
GLLTDRESLPERSNEIRERLRGKGLPSGRSAAPRVLERYRARSQEQTSLNRGLSRSMGSL
PIQDLVKGDEGAAHQYYPSDYHPNSDSPTEFYPKPPSLHHQLSYPYLHPLHPQQKGRPVE
LDRRSLAFHSVDLAPSRAKKNWASSVDLACIDPEALRFGALEDARRGSSIINSHSIGRRK
SPLRSSRERESRFSEFSGLKSRKPHHHSALSVGSGLTGAYDRIKERQRKLQVLRQAVDDP
VHTHQRYNSDYSSSSESPSGTSSDPDYRQAKKPGDVRRFGSQLALSSEHDALSLTSHNRH
RLYERVADEDLVEAELLLQRQEEEVQRLQAHLANRLSRANLYPADDPLAPSRTSMLDLRD
PLHSSSVPLRKPKNFHGPEFVKMTSEPCVALSVPSSIMKRGKVEEVQRKVGVVLLNGQKL
ELSCDIKAVCKDVLDMVVAHIGLVEHNLFGLAYLRDDEFFFVEPDAKLTKVAPEGWKEDP
KKKKSDVPFNLFLRIKFFIDDVNLVQHAMTKHQYYLQLRKDILEERMRCDTESVMLLASL
ALQAEFSDYQPELHGKTYFRLEHYLPVSVLDRVDQTTIKEELPKLHSNYYGASESEAEFE
FLKVSQRLTEYGVHFHRVLPEKRSQTGIMLGVYSKGVLIFEVLNGNRTPVLRFPWRETKK
ISFIKKKICLQNTSDGIKHLFQTDSNKTCQYLLQLCSYQHKFHLQMKARQSNQELQDLEN
CPLSSLQYSLDSRSGDSVGRTVSSGSLAPSLSTRSNPDQLKRISYSEVALHKATSGSVLV
QDELHFPGFNPVASTVLSNPRIMSRSHHNLGQMPESPEHRMAKAYQGQSQARLSQAPPNQ
APSHFQQHQRASSDTDSISHQQDKSLGAVSHSSPVWSVSSSRKESDSSSTEDTGQAYVVG
VSMHSSSGPPSTPASVNDSLKKKVIALPSPEREITTVNLKKDVKYGLGFQVVGGQNSRVE
LGTIISSITPGGPADVNGCLKPGDRLISVNDVKLEGLSHSTTIEILQNAPDDVTLVVLQP
KERLYKESSSGYVPYPAKSALKPLNSDQRRELDFDTSEEEQAGTGSPSPPLHGAGTPSSG
SSPVHQHTSFSSQDSRTSSVAKISAPIVDVRQCLERITNSSTAATSATHQRPEPNVGLEP
TPPALPPKTRKAKVAEAPKVSEHSDWGDSDMDEETLSSSQEKLKIKKENIMENCNGNAPG
VNSLRPGELFDVELSKKDSSLGISVTVLFGKGGFNTTVRHGGIYVKGIIPKGAAELDGRI
KKGDRVMAVNGTSLEGATHQQAVEALRDTGQTVHLLLEKGHPPADSVHAPLTPQSTLLTA
NSYQDPNKNKKQPLQVKEKPEYNFVTEDNVFEVLLLKNTSGLGFSFSREEHIPDEPHGSS
MVRVKKLFPGQPAAESGRINVGDIIMRVNQTPLKGLSQHEVISALRGTGQEVNLLLCRPE
YGVLPEMDSSALSPKSSPRKEPQTQAEPSRSLDRATSPPGTQGQTGRVSVEDALERLLLK
NPGRQNSYSDSTDGDEEVEEAFSPNPAEHNKQAWERSVYLNPSSNLGLGRYDSTGQLDDT
INPAFYSPNLSITRSDLSKRFPSSPVTADLESSSLHMVSSPTAPSPDPLPPPLPLPLNLT
VSGNGQEMEDFVPEVELRVSLVKSEKGSLGFTLTKGSDHGCYIHDIVQDPAKGDGSLKPG
DRMIMVNNTDVSNMGHTEVVNLVRAAPRVVDLVVGRVLEAPKPPIEAHLLPDIDFEDSQE
PMGLVLDGGSDSVYDVLFVREVLPGSMAYEEGTLRPLDLIHYINGAPTQDLTLSESTRLL
ELSLNDLTLKATRDGKPVSPGRKIVSFLNNNVSPEISSSMNGFLKGEDPRDTECIATLCP
LEEEIIRLDMEKLQSGGLGFSVIGGERGIFVKSITPGGIAESSGKLQVGDRLLKVNEELM
TGVSHTKAVTTIRKAKGLVHLIVSRPPDQNPNTYMAYLPINSDKCNGNTDLSDDSGAKTK
LFTLNNELKSCCFPSIPPIDYEDEPLEQKRPTDHSAELSEDTDCDGSSLPEDSPESSRKV
GWQEESVDYPRNENYLQMSAGQPEEDEITWGSEELPIENMNKSQDDEPIITEDELTSLPL
VKVVPDGQYTGKKLNTVVRMMRGLLEQKVPLQEFENLQNLQPLDDCLIGQTKENKKKNRY
KNIVPFDTTRVVLEKDGGYINANFIKMSVKEESYLYIACQGPLPTTLGDFWQMVWEQKSN
VIAMMTQEVEGGKVKCQRYWPDTPRTAEMVDDRLQITLIKDQYLDNFVIRVIEVKDVQTN
EIQRVTHLNYTGWPDHGTPSQPEQLLTFISYMRHVHRSGPIITHCSAGIGRSGTLICLDV
VLGLISKDADFDISDIVRNMRLQRQGMVQTEDQYIFCYQVILYVLRCLQAEENISG
NT seq 7731 nt   +upstreamnt  +downstreamnt
atgcatgtgtctctggcagaagccctggaggttcgggggggtccgctgcaggaggaggag
gtctgggccgtgctcagccagagtgctgagagcctccaagaactcttccacaaagacccg
acagccatgggcttcatcatctctccctggtccctcctcctcatgccctctggaaacatc
tcattcacagacgagtatgtcacccagcaggatctaagggccttcacagccccagaggtc
ctggaggggttgtccctgacttccatctctgatatagagaagatgcacatgtactctctg
gggatgacgctgttctggggcgcggactatgagatcccccaaagtcagcctatgaagttg
ggggagcacctgaacagcctgcttctcaacatgtgtgatgatattacactgagtcgaatg
tcgttgcgcacggtgctggacatctgcagcaaacacattagaaactccagttgtgaccct
cccttctcctatatcagaaaactggtccggttggtactgggcagcctttcccagctggac
ggtctgctgactgatcgagagtctcttccagagcggagtaatgagattcgggagaggctg
agaggaaagggcctgccctcagggaggagcgccgcccccagggttttggagcgctacaga
gccaggagtcaggagcagacgtctctgaaccggggcctcagtcgctccatgggctctctg
cccatccaggaccttgtgaagggggatgagggggcagcccatcagtattacccatctgac
tatcaccccaactctgattcccccacagaattctaccccaaacccccctcactccatcac
cagctgtcctacccctatctgcacccccttcacccgcagcaaaagggccgccctgtggaa
ctggaccggcggtctttagccttccacagcgtggacctggcccctagtcgggccaagaag
aactgggcttcctccgtggacttggcctgtatcgacccagaggctcttcgttttggggct
ctggaggatgcgcggaggggcagcagtatcataaactcccactccataggcaggcgcaaa
tcgcccctgcggtcatccagggagagggagtctcgcttctccgagttcagtgggctgaag
agcaggaagcctcatcaccactcggccctgtcagtgggatcgggacttactggcgcatat
gacaggataaaggagagacagaggaaactgcaggtgctaaggcaagcagtggatgaccca
gtccacactcatcagaggtacaacagtgattacagttcatccagtgaaagcccctctggg
acctcctcggatccagactacagacaagctaagaaaccaggcgatgtgaggaggtttggc
tcccagctggcactttcctctgaacatgatgccctgtcgctgacaagtcacaacaggcac
aggctgtatgagagggtggctgatgaagatctggtggaggcggagctgctcctccagagg
caggaggaagaggtgcagcggctccaggcccacctggccaacaggctctccagggccaac
ctctaccctgcagatgaccccctggccccatctcgcacttccatgctcgaccttcgggac
cccctccactcctcttctgttcctcttcgcaaacccaagaacttccacgggcctgagttt
gtgaagatgaccagtgagccgtgtgttgccctatctgttccctcttccatcatgaagcgt
ggtaaggtggaggaggtgcagaggaaggtgggtgtggtgctgctgaacggccaaaagctg
gagctgagctgtgacatcaaggccgtttgtaaagacgttctcgatatggtggttgctcac
atcgggcttgtggagcacaatctcttcggactagcatacctcagagatgatgagtttttc
ttcgttgaacctgatgccaaactgaccaaggtggccccagagggatggaaggaggaccct
aagaagaagaaatcagatgttccttttaatcttttcttacgcatcaaattctttattgat
gacgtcaacctcgtacagcatgctatgaccaaacatcagtactacctacagctgaggaag
gatatcttggaggagaggatgcgctgtgacacagaaagtgtcatgctgttagcttcactg
gcactgcaggctgaattcagtgactaccagcctgagctccacgggaagacctacttcagg
ctggagcactacctcccggtgtctgtcctggatagagttgaccagacgaccatcaaggag
gagctgcccaaacttcacagcaactactacggggcgtctgagtctgaggcagagtttgag
tttctcaaggtgagccagaggctgacagagtatggggtccatttccaccgggtacttcct
gagaagcggtcccagacgggcatcatgttgggggtctactccaagggggtgctcatcttt
gaggttcttaacggaaatcggaccccggtgctaaggttcccttggagggaaactaaaaag
atttcctttataaaaaagaagatttgcctgcagaacacatcagatgggattaagcacctg
tttcagacggacagcaacaagacctgtcagtatctgctccagctctgctcataccagcac
aagttccacctgcagatgaaggctcgccagagcaaccaggagcttcaggacctagaaaac
tgccccttgagcagtctgcagtattccctggactctcggagtggagactctgtggggagg
acggtgagctcgggcagcctggcccccagcttatcaacgcgctccaacccagaccagctg
aagaggatctcctactccgaggtggccctccacaaggcaacctctggctccgtgttggtc
caagatgagcttcactttccaggtttcaatccagtggcctccacggtcctttccaatccg
cggataatgagtcgctctcaccacaatctgggacagatgccagagtctccagagcaccgg
atggcaaaggcgtatcaaggccagtcgcaggccaggctgagtcaggcgccaccaaaccaa
gcgccctctcacttccagcaacaccagagagccagctcagacacagactccatctcacac
caacaggacaaatctttgggagcagtgtcccacagcagcccagtatggagcgtcagcagt
tccagaaaggaatctgactcttcttccacagaggatactggccaggcttatgtagttggt
gtcagtatgcacagttcctctggaccaccctcaaccccagcctctgttaacgattcactt
aagaaaaaggtcattgccttgccgtctccagaaagagaaatcacaactgtaaacctgaag
aaagatgtgaaatatggcctggggttccaggtggttggagggcagaactctcgtgtggag
cttggcaccatcattagctccatcactcctggaggtcctgctgatgtcaacggctgcctc
aaacctggtgaccggctgatctcagtgaatgatgtgaaattagaaggcctctctcattcc
actaccattgaaatccttcaaaatgctccagatgatgtgactctagtggtgctacagccc
aaagagaggctctacaaagagtcttcttcaggctatgttccctacccagccaagtctgct
ttgaagccacttaactctgaccagagacgagaactagactttgatacatcggaggaggag
caggcgggaacaggaagtcccagccctcctctccacggcgctggcacgccgtcatccggc
tcctccccggtccaccagcacaccagcttcagctctcaggactccaggaccagcagtgtt
gctaaaatcagcgcaccaattgttgatgtccggcagtgtctagaaagaattacaaattct
agcacagctgcaacctctgccacacatcagagaccagaacctaacgtgggtttggaaccc
acgccaccggctctgccgcccaaaactagaaaagctaaagtagcagaagctcccaaggtt
tctgagcactctgactggggggattcggacatggatgaggagactctttccagtagtcaa
gagaaactcaaaatcaaaaaggaaaacatcatggaaaattgtaatggtaatgccccaggg
gtcaatagtctccgtccaggagaactatttgatgttgagctgtctaaaaaagacagcagc
ctgggcataagtgtcacggtactgttcggaaagggtggcttcaacacgactgttcgacat
ggaggcatctacgtcaaaggcatcataccgaagggagctgctgagctcgacggaagaatt
aagaaaggtgatcgtgtgatggctgtcaatggaacaagtctggagggagccactcatcag
caagcagtggaggctctgcgagacactgggcagactgtgcacttgttgctggagaaaggt
catccgccggcagacagtgtccatgctcccctcacgcctcagagcacgttactaactgcg
aacagctaccaggaccccaacaagaataaaaagcagccgcttcaggtcaaagagaaaccg
gagtacaactttgttacagaagacaatgtgtttgaggtgttactgctgaagaacacgtca
ggcctgggcttcagtttcagtcgggaggagcacatccctgacgaaccccacggctccagc
atggtgcgggttaaaaagctgtttcctggccaaccagctgcagagagcggccgcatcaac
gttggcgacatcatcatgcgggtcaaccagacccctctcaaaggactctcacaacatgag
gtgatttcagccttgcgaggaacgggacaggaggtgaatttgcttctttgtagacctgaa
tatggagttcttcctgaaatggacagttcagctttgtctcctaagtcatcaccgcggaag
gagcctcagacccaggcagagccgagccggagcctggacagggcgacctctcctccgggg
acacagggccagacgggtcgagtcagcgtggaggacgccctggagaggctgctgctcaaa
aaccccggccgacaaaacagctacagcgacagcactgatggggatgaagaggtggaagaa
gccttcagcccaaacccagccgagcacaacaagcaagcgtgggagcggagtgtctacctc
aaccccagcagcaacctgggactgggacgatacgacagcacgggtcagctggacgatacc
atcaacccagccttctactccccaaacctgtccattacaagatcggacctcagcaagagg
tttccttcttcccctgttacagctgatttggagtcgtcctcccttcatatggtgtcctcc
cccactgctccaagccctgatcccctgcctcctcctctgcctctgcccttaaacctcacc
gtgtctggcaatggacaggaaatggaggactttgtcccggaagtggagctaagagtctcc
ctggtgaagtcagaaaaaggcagccttggcttcaccctcaccaaaggaagtgatcatggg
tgttacatccatgacatcgtccaggatccagccaaaggagatggcagtctcaagcccggg
gaccgaatgattatggtgaacaacacagatgtgagcaacatgggccacacagaggtggtc
aatcttgtgcgcgctgctccccgagtggttgacttggtggtagggagggtcctggaggct
cccaagcccccaatagaagcccacctgctgcctgacattgactttgaggacagccaagaa
cccatgggtttggtactggacggtggcagtgacagtgtttacgatgtcttgtttgtgaga
gaagtcctgcccggctcaatggcctatgaggagggcaccctgaggccacttgatctgatc
cactacatcaacggtgctcccacacaggacctgactctgagtgagagcaccagactgctg
gagctctccctcaacgacctcacactgaaggccacaagggacggaaagcctgtttctcct
ggtcggaaaattgtctcttttcttaacaacaatgttagccccgagatttcatccagcatg
aacgggtttcttaaaggagaagatcccagagatacagagtgtattgcaacactttgtcct
ttagaggaggaaatcatcaggctggatatggagaagctgcagtcaggaggtctgggcttc
tctgtgatcggaggagaaagagggatatttgtcaagtccatcacaccgggaggaatagca
gagtcctcggggaaactgcaagtgggagacaggctgctgaaagtgaatgaagaactaatg
acaggcgtgtctcacaccaaagctgtcaccactatccgtaaagctaaaggcctggttcat
ctcatagtgtcaagaccgcccgaccagaacccaaacacttacatggcctacctgcccatc
aactctgacaagtgcaatggaaacacagatctgagtgacgacagtggagcaaaaacgaag
ctgtttactctcaataatgagctgaaatcttgctgcttcccttctataccaccaatagac
tatgaagatgagccattagaacagaaaagaccaacagatcacagcgctgagctttcagag
gacacagactgcgatggctcttctttacctgaagactcgcctgagagttcccggaaagtg
ggatggcaagaggagagtgttgattatccaaggaatgaaaactatctgcaaatgagtgct
ggacagccagaggaagatgagatcacatggggcagtgaggaactgcctattgaaaacatg
aacaaatcccaagatgacgagccaatcatcacagaggatgagctgacctctctgcccctc
gtcaaagtggtccctgatggccagtacacaggaaaaaagctcaacactgtggtccgcatg
atgagggggctcctggagcagaaggtccctctgcaggagtttgaaaaccttcagaatctc
cagcctctggacgactgtctgataggtcaaacaaaggagaacaagaagaagaaccgctac
aagaacattgtcccctttgacacaactcgagttgtgctggaaaaagacggcggctacatc
aatgccaacttcatcaagatgtcagtgaaagaagagagttatttgtacatcgcatgtcag
ggtcctttacccaccaccctgggtgacttttggcaaatggtctgggagcagaagtccaat
gtaatcgccatgatgacccaggaagtagagggggggaaggtgaaatgtcagcggtactgg
cccgacactccgaggacagcagagatggtagacgacaggttacagatcacgctgatcaaa
gaccaatacctcgacaattttgtcatccgagtcatcgaggtcaaagatgtccagactaat
gaaatacagcgtgtaactcatctgaactacacgggatggccggaccacggcacgccctca
caacccgagcagctgctcacatttatctcctacatgaggcacgtccatcgatcggggcca
atcatcacacactgcagcgcaggcatcggccgctcaggaaccctcatctgtctagacgtg
gttctgggtctcatcagcaaagacgctgattttgatatttcagatattgtaagaaacatg
agacttcagagacagggaatggtgcagacagaggaccaatatattttctgctatcaagtg
atcctctatgtcctgagatgccttcaagcagaagaaaacatctctggatag

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