KEGG   Notothenia coriiceps (black rockcod): 104954544
Entry
104954544         CDS       T04920                                 
Name
(RefSeq) AF4/FMR2 family member 1-like isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncc03021]
    104954544
Transcription machinery [BR:ncc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     104954544
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 104954544
NCBI-ProteinID: XP_010779966
UniProt: A0A6I9P087
LinkDB
Position
Unknown
AA seq 1173 aa
MASQPSIYNEERNRLRLRAREQRNQETSPAKEPNPENVPLFREPYKTNKGDTLSNRIQRM
LGSFEDVNNPCPLAIEPLPIPTYVTFSQSDQAQPNTDKPAKPPFLNQVHTSIPSQKAPSC
NGYSSQPMRTSTAPSPPNQHGHSSTFSNRSLNHSQLGLSAQQQKKSEAHSGLRECVSLPQ
EMSYQSPDAKRPPFPHSIDHDNYDTDTRDTFDRLQGSTDHHPESDNAMDVSTFDLKQSPK
DSSLPQANKGNALPSQTFPSLLSLKPPSVVMTQKPTAYVRPMDGQDHVVSESPRLKLSPE
PYVPLPEIINKSALGKTKLLPPFLETRTDEVQCVEEILREMTHSWPPLLTAIHSPSSVEP
SKSPFPAKEAASLSSCPVQKNYKSPPANPSQLIQQSSSSSLEAAHSRGVEPASSSDSECS
SRSESESESTIEEPPPPPVSISVKTEPEPLAVTHGDWQLGNWIQSRSSQQNSSAEGQSCS
HPYESPAHKRPPPTQSSKHPLSAEVVDPYRESKPSSSNQKELTQHHSESPQDNYNHQSGH
KSPSAHLNISRTLLCNTHSSKPVNTKATINVKCEEAVDTRSKDPCFTDRPKVKTKVGHSK
KSKNNSETKRDAKRTSKHTSLDKRKTGSDPEVTVVLCVHCPSCGVRYPNPCSCPTQSPAK
ADQLTPAPPLRVSCSKPMLETLCPKGSKVLHKTSKRHSEKTGHTIKSSLEPQKPFSSLLV
KIDLSLLSRVPWTCNIHQELPNNAKRSALVVEQHAGGGDASTPHKVIESSKKSISQNVEV
DNSTHPRKKQKLENKNTSSTSHASVKLECSSKSKADGERKKKVEKKTVPMQQPLTPKDPA
KDPAKVPKVNKRSSGKPQESSKEAAKSKDSQKHKKSGGKHAEKPHFEKQKPQKSTPAVPS
SSQTPRGALSRRPLLRVEGRQYPVKHYIKEAKKLKHKADVESDKLIKAFNYLDAAMFFVE
SGIAMEKDPHISTSSYTMFAETVELLKFVLKLRNSVDASATAAEKDFFALCLKCQSLLQM
AMFRHKHKIALKYSKTLTDHFSNSTTRDPPVLTPKVTHTPSYMPNMPSPANTSSSFGPGS
GHSGSGVDPVGSTVTVPQAIGQVALTYVNITTLVLSAHDIWDQAEELSQKGSGLLTELDS
VMGALSLTSSMSSVVRYTRQGVHWLRLDSQKVN
NT seq 3522 nt   +upstreamnt  +downstreamnt
atggcatctcagccgagcatatacaatgaagaaaggaaccgtcttcgcctccgagcgcgg
gaacagaggaaccaagaaacaagcccagccaaagaacccaaccctgagaatgtgccactc
tttagggaaccatacaagacaaacaaaggggatactctttccaatcgaatccagaggatg
ctgggtagttttgaagatgtgaataatccctgtcccttagccattgagcctttacccatt
cctacttatgtaaccttctcacagtcagatcaggctcagccaaacacagataaaccagcc
aagcctccattccttaaccaagtccacacgtccatcccaagtcagaaagccccctcttgt
aacggttactcctctcagcccatgaggacgtccactgccccttctcctcctaaccagcat
ggacattcatccactttctcgaataggtccttaaaccacagtcagctcggcctctcagca
cagcaacaaaagaagagtgaagcccactcaggtctcagggagtgtgtcagccttccccag
gaaatgtcttatcagtctcctgatgccaagcggccacccttcccacattccattgaccat
gataactatgacacggacactagggacacctttgatagacttcaaggttccacagatcac
caccctgagtctgacaacgccatggatgtttccacatttgacctgaaacagtcccccaaa
gattcatctctgcctcaagcaaacaaaggtaacgcactaccttcccagaccttcccttca
ctcctgtcgttgaagccgcccagcgtagtcatgacccagaaacccacagcgtatgtgcgg
cccatggatggtcaggaccatgtggtcagcgagtcacctaggctgaagctttcaccagag
ccatatgtacctctaccggagataatcaacaaatctgcgctgggcaaaaccaagttgctg
ccaccatttttggagaccaggacagatgaggttcaatgtgtcgaagaaatcttgagggaa
atgacccactcatggcctcctctcctgacagccatacactcaccgagctcagtagaaccc
tccaagtctccgttcccagccaaggaagcagcgagtctctcttcatgtccagtacaaaaa
aactacaagtcccctccagcaaatccatcccagctcatccagcagagctcatcatcatca
cttgaagcagcacattcccgaggggtagagccggccagctccagtgactcagagtgtagc
tcaagatcagagtcggaaagtgaaagcaccatcgaggagccgcctccaccccctgtgagc
atctctgttaaaaccgagcctgaacctctagcagtgacccatggtgattggcagctcggg
aactggatccagtccaggtccagccagcagaactcgagcgccgaaggtcaaagctgttca
catccctatgaaagccccgctcacaagcggccaccgcccactcaaagctccaagcaccca
ctcagtgcagaggtggtcgacccctacagagagtccaaaccttcttcttctaaccagaaa
gagttgacccagcatcacagtgaaagccctcaggacaactataaccatcaaagtggccac
aaatccccctctgctcatttgaacatctccaggacacttttatgcaacacacactcctca
aaaccagtaaacactaaagcaactatcaacgtgaagtgtgaggaagcggtcgatacgcga
agcaaagacccctgttttacagatagacccaaggttaagacgaaagtaggccacagcaag
aaaagcaagaacaacagcgagactaaaagagacgctaagaggacttctaaacacacgtca
cttgacaagcggaagacgggatcagatcctgaagtcactgtggtactgtgtgttcattgt
ccatcttgtggtgttcgatatcctaacccttgctcctgcccaacacaaagtcctgcaaag
gctgaccagctgacccccgccccgccacttagagtcagttgtagcaaaccaatgttggag
accctctgcccaaagggatccaaggttcttcacaagacaagcaaaagacactcagagaaa
actgggcacacgatcaagagttctctggaaccccagaagccttttagctccctgcttgtg
aaaatagatctaagtctgctctcaagagttccctggacctgcaacatccaccaggagtta
cccaacaatgcaaagagatcagcactggtcgtagagcagcatgcagggggtggtgatgct
tctacaccacacaaagtcatcgaaagcagcaaaaagagtatatctcaaaatgtcgaggta
gacaattcaactcatcccaggaagaaacagaagctggaaaacaagaatacctcatcaaca
agtcatgcttctgtcaaactagaatgttccagcaagtcaaaagcagacggggagcgaaag
aaaaaggtggagaaaaaaactgttcctatgcagcagcctctgacacccaaagaccctgct
aaagaccctgctaaagtcccaaaggtgaacaaacgcagttctgggaagccccaggagtcc
agcaaggaggcagcaaagagcaaggactcccagaagcacaagaagagcggcggaaagcat
gccgaaaaaccacactttgaaaagcagaagccccaaaagagcacccctgctgtcccatca
tcttcacagacccccaggggagctttgagcagacggcccttgctcagagttgaggggagg
cagtatccagtgaagcattacataaaagaggccaaaaaactgaagcacaaagcagatgta
gagtcagataagctgatcaaagcttttaactacctggatgcggccatgttctttgtcgaa
agtggtattgctatggagaaagatccacacatttcaacgtcttcctacactatgtttgca
gaaacagtggaactgctcaagtttgtactgaaacttagaaactcagtggatgcctctgct
actgctgcagaaaaagacttttttgctttatgtttgaagtgccagtccctcttgcagatg
gcaatgtttcgccacaaacacaaaattgccctcaagtattcgaagaccctcaccgaccac
ttcagtaactcaacaactcgcgatcctcctgttttaacaccaaaagtcacacacaccccg
tcctacatgcccaacatgccttctccagccaacacgtccagcagctttggtcccggctcc
ggccacagcgggtcgggtgtggaccctgtgggcagcactgtgacggttcctcaggccatt
ggacaagtggcattaacctacgtcaacatcactacattagttttaagcgctcatgacatc
tgggaccaggcggaggaactgtcgcagaaaggcagcggtttgctgacagagctggactca
gtcatgggtgcattgagcctaacttccagtatgagctctgtggtgcgctacacgagacag
ggcgtccactggctgaggctggacagccaaaaggtaaactga

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