Notothenia coriiceps (black rockcod): 104954584
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Entry
104954584 CDS
T04920
Symbol
chpf2
Name
(RefSeq) chondroitin sulfate glucuronyltransferase
KO
K03419
chondroitin polymerizing factor 2 [EC:
2.4.1.226
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc01100
Metabolic pathways
Module
ncc_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104954584 (chpf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104954584 (chpf2)
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
104954584 (chpf2)
Glycosyltransferases [BR:
ncc01003
]
Glycan extension
O-Glycan
104954584 (chpf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
104954584
NCBI-ProteinID:
XP_010780028
UniProt:
A0A6I9NZ27
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MRLSSVLALFRPALPLILGLSLGCSLSLLMVSWTQGDTDDSCGDELGNGRLFMGRGDAQR
DSRDGAGEEDFQPRIIPYHKDPNKPHKKVLRTRYIHTELGIRERLLAGVLTSRATLNTLA
VAVNRTIAHHFHRTFFFTGLRSPKVPHGMTVVAHGDDRPVWLMYETVRHLHRHYGSDYDW
FLLSQDDTYIQANRLTELVGHLSAGQDLYMGRAEEFIGGEEKARYCHGGYGYLLSRSLLA
RLQPHLDTCRNDILSVRPDEWLGRCIIDYLGLSCVEVHQEMTYRYFELGKNADPEREDSI
QFKNAFTVHPISEPNLMYRLHKRFSQIELERTYQQIQHLQVQINNLSDLTPEGKAGVTWP
IGINAPFKPKTRFEVINWEYFTEEHIYSCIDSSPKCEMRGADRADVNAVLEIAVERLNER
YQPQLRFHKRRLLNGYRRFDPTRGMEYVLDLALEAYTQKGHSQVIAKRVNLLRPLSAVEI
IPMPYVTEATRVQVILPVTAQDQDFVGNFLDMYVMNTLDTHDNVLLTFLFIYDPFDAQRV
SQTDVFAGIKAMIGEVEKRYGDVKIPWISVKTEVPSQVKLMDIISKKHPVDTLFFLASVW
TEVNADFLNRCRMNAISNWQIFFPIHFQEYSPAVMYRDQPPSAASSSFASESLRDGHFDR
QVFDEACFYNADYMTARTKMAADILDNEELLESMDVYDIFVRYSGLHVFRAVEPALIQKY
VRRACNPRFSEDIYHRCVLSNLEGLGSRSHLAMAIFEQEQANST
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttcctcagttttggccctgttcaggcctgctttaccccttatcctcgggcta
tctctgggatgtagtttgagccttttaatggtgtcctggacacaaggtgataccgatgac
tcctgtggagatgaactgggcaacgggagactttttatgggcagaggagatgcccagaga
gactcgagagatggtgctggagaggaagacttccagccacgtatcattccatatcacaag
gacccaaacaagccccacaagaaagttctaaggactcgttatatccacacagaactgggc
atcagagagcggctgctggcgggagttctgacttcccgggctaccctcaacacactggcc
gtggcagtgaatcgcactattgcccaccacttccatcgcacctttttcttcacaggcctg
cgcagccctaaggtgcctcatggcatgactgtggttgcccacggcgacgaccgtccagtt
tggctgatgtacgagacagtgcgtcacctccatcggcactacggctctgactatgactgg
ttcctcctatcccaggatgacacctacatacaagcaaatcgtctgacagagctggtgggc
cacctcagtgcaggtcaggacctgtatatgggcagggcggaggagtttataggtggagaa
gagaaagcacgctattgccacggcgggtatggctacctgctgtcccgcagtctgctagca
cgtctgcaaccccaccttgacacctgccgcaatgacatcctcagtgtgaggcctgatgag
tggctgggtcgctgcattattgattacttgggtctcagttgcgtggaggttcaccaggag
atgacatatcgttacttcgagctcgggaaaaatgcagatccagaacgtgaagatagcata
cagtttaaaaatgccttcacagtccatcctatatcggaaccaaacctcatgtaccgccta
cacaaacgcttcagtcagattgagctggaaaggacttaccaacagattcaacatctgcag
gtgcagatcaacaacctgagtgatttgacgccagagggtaaagctggagtcacatggcct
attggaatcaacgctcccttcaaaccgaaaacccgttttgaggttataaactgggagtac
tttaccgaagagcatatttactcgtgcattgacagctccccgaagtgcgagatgagaggg
gctgaccgtgctgatgtaaacgcagttctggagatcgcggtggagcgtctgaatgaacgc
taccagccccagctacgcttccacaagcgccgcctacttaacggttaccggcggtttgac
cccacgcgtggaatggagtatgttctggaccttgcactggaggcatacacccagaaaggc
cacagtcaagtcattgccaaacgggttaacttattgcggcctttaagcgcagtggaaatc
atcccaatgccctatgtgacggaggcgacgcgtgtgcaggtcatcctccccgtcaccgcc
caggatcaggactttgttggtaacttcctcgacatgtacgtgatgaacacgttggacacc
catgacaatgttttactgacgttcctgttcatctacgatccttttgacgctcagagagtc
agccagacagatgtgtttgccggcatcaaggccatgattggggaggtggagaagcgttac
ggtgacgtgaagatcccctggatcagcgtgaagacggaggtgccctcacaggtcaagctg
atggacattatctccaagaagcacccagtggacacgctgtttttcctcgccagcgtgtgg
acagaggtcaacgccgacttcctgaatcgctgcagaatgaacgctatcagcaactggcag
atcttcttccccatccacttccaggagtacagtcccgctgtcatgtaccgcgaccagccg
ccctctgcggcctcctcctctttcgcttctgagtcgctgcgagacggacactttgaccgg
caagtcttcgacgaggcttgtttttacaacgctgactacatgaccgcgaggaccaagatg
gcagctgacatcttggacaacgaggagctgctggaaagcatggacgtgtacgacatattt
gtccgttactcgggcctacatgtgttcagagccgtagagcccgcgttgatccagaaatac
gtgcggcgagcgtgcaacccacgattcagcgaggatatctaccaccgctgtgtcctcagc
aacctggagggcctgggctcccgctcacatctagctatggctatttttgaacaagagcaa
gccaacagcacctaa
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