Notothenia coriiceps (black rockcod): 104954656
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Entry
104954656 CDS
T04920
Name
(RefSeq) amyloid beta A4 protein-like
KO
K04520
amyloid beta A4 protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104954656
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncc01002
]
104954656
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ncc00535
]
104954656
00536 Glycosaminoglycan binding proteins [BR:
ncc00536
]
104954656
Peptidases and inhibitors [BR:
ncc01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
104954656
Proteoglycans [BR:
ncc00535
]
Cell surface proteoglycans
Others
104954656
Glycosaminoglycan binding proteins [BR:
ncc00536
]
Heparan sulfate / Heparin
Others
104954656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_Cu_bd
APP_N
Beta-APP
APP_E2
Kunitz_BPTI
APP_amyloid
CDC45
Motif
Other DBs
NCBI-GeneID:
104954656
NCBI-ProteinID:
XP_010780127
UniProt:
A0A6I9NVL0
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
LYLLAVLQEVYPELQITNVVEANQPISIQNWCKKGHKQCRSHMHIVVPYRCLVGEFVSDA
LLVPDKCKFLHQERMDQCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDRFRGVEFVC
CPAEAERDADSAEKDADDSDVWWGGAETDYSDNSMVREPEPVEQQEEARPSVVQEDEDEE
EEEEEEVAPEKNEEAAAEDEDEEDEEEDVLDNDQDGDGEEDEEAVEEEEEEDEDEEEGDD
VVLDTFEDDADEPTTNVAMTTTTTTTTTESVEEVVKDVCWSNAETGPCRAMLPRWFFDPQ
EGRCAQFIYGGCGGNRNNFDSEEYCLSVCSSVSKSPLAAGVSLTLAFNSLPEINPPALPL
PLTTCHLLLQPRHVFSLLKKYVRAEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVVTHLRI
SEERMNQSMDLLYKVPGVADDIQDQVELLQRELAEMAQQLANMQTDVRVSYGNDALMPDQ
ELGDGQIELLPQEDSLNLGGVGFIHPESFNQPNTENQVEPVDSRPNFDRGIPTRPVTGMK
MEAMPELRMETEDRQSTEYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVTPPPPPLLAPF
QVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ctttacctcctggcagtactgcaggaggtgtacccagagctgcagatcaccaacgtagtg
gaggccaaccagccaatcagcatccagaactggtgcaagaagggccacaagcagtgtcgc
agtcacatgcacatcgtggtgccctaccgctgcctggtgggagagtttgtgagtgacgcc
ctgctcgtgcctgacaagtgcaagttcctgcaccaggagcgcatggaccagtgtgagagc
cacctgcactggcacaccgtcgccaaggagtcctgtggagaccgcaccatgaatctccac
gactacgggatgctgttgccgtgcggtatcgaccgtttccgaggagtcgagtttgtgtgc
tgtccggcagaggcggagcgagacgccgacagcgccgagaaggacgctgatgattccgat
gtctggtggggtggagcggagactgattactctgacaacagtatggtgcgggagccggag
ccagtggagcagcaagaggaagcgaggccatctgtggtgcaggaggacgaggacgaggaa
gaggaggaggaggaggaggtagccccggaaaagaacgaggaagcagcagcagaggatgag
gacgaggaagatgaggaagaggacgtgctggataacgaccaggatggagacggagaggag
gacgaagaggcagtggaggaggaggaggaggaagacgaggacgaggaggagggagatgac
gtcgtgctcgacacatttgaagatgacgccgacgagcccaccaccaacgttgccatgacg
accaccaccactaccaccaccaccgagtctgtggaggaggttgtcaaagatgtgtgctgg
tccaatgcagagaccggtccgtgccgggccatgctgccccgctggttctttgacccccag
gagggccgctgtgctcagtttatctacggcggctgcggaggcaacaggaataactttgac
tcagaggagtactgcctgtctgtgtgcagcagcgtcagtaagtctccattagcagccggt
gtgtctctaaccctcgcttttaactcccttcctgaaataaatccccccgcccttcctctg
cccctcaccacctgtcatcttctgctgcagcctcgccacgtcttcagcctgctgaagaag
tacgttcgtgccgagcagaaggaccgacagcacaccctcaaacactacgagcacgtccgc
atggtggatcccaagaaggctgcgcagatcagacctcaggtagtgacccacctgcgcatc
agtgaggagcgtatgaaccagtctatggatctcctctacaaggtgcccggggtggccgac
gacatccaggaccaagttgagctcctgcagagggagctggcggagatggcccagcagctg
gccaacatgcagacggacgtgagggtgagttacggcaacgacgccctgatgccggaccag
gagctgggagacggtcagatcgagctgctgccccaggaggactcgctgaacctggggggg
gtgggcttcatccaccctgagagcttcaaccagcccaacacagagaaccaggttgagcca
gtggactctcgccccaattttgaccgaggcattcccacacgaccagtgactggaatgaag
atggaggcgatgcccgagctgaggatggagacggaggacagacagagcaccgaatacgaa
gtccaccaccagaaactggtcttcttcgcagaggacgttggctccaacaagggcgccatc
attggcctgatggtgggaggcgtcgtcacccctccccccccccctcttttggctcccttc
caggtggacgcggccgtcacccccgaggagcgccacctgtccaagatgcagcagaacggc
tacgagaacccgacctacaagttcttcgagcagatgcagaactga
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