Notothenia coriiceps (black rockcod): 104954753
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Entry
104954753 CDS
T04920
Symbol
stx16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104954753 (stx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104954753 (stx16)
Membrane trafficking [BR:
ncc04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
104954753 (stx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
MCPsignal
Syntaxin_2
DUF2116
Orf78
Lzipper-MIP1
DUF6548
T3SS_needle_E
MbeD_MobD
Motif
Other DBs
NCBI-GeneID:
104954753
NCBI-ProteinID:
XP_010780233
UniProt:
A0A6I9NZM0
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All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MATRRLTDAFLLMRNNAIQNRQILAEQVSTYDPRLSTRSNAAELDELADDRMALVSGISL
DPEAAIGVTKRLPPKWTEGIDEIQYEITRVRQKMKDLALLHDKHMNRPTLDDSSEEEHAI
EITTQEITQMFHRCQRAVTGLQTRCGHCTEQEERLLRNVVSSLAQSLQELSTNFRHTQSG
YLKRMKNREERSKHFFDSGPLMEEDEDLAVYDKGFTDDQLMLVEQNTVMVEEREREIRQI
VQSISDLNEIFRDLAGMVVEQGTVLDRIDFNVEQACVKTEEGVKQLQKAEQYQKKNRKML
VILILFVIVMVLIVILFGTKF
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggccactaggcgtctgaccgatgccttcttgttaatgcggaacaatgcgatccaaaac
cggcagatattggctgagcaagtgagtacatacgacccccgtctgagtacacgtagcaat
gctgcggagcttgatgagttggctgacgaccgaatggccctggtgtcagggattagtctg
gatcctgaagcagccatcggcgtcacaaagaggctgcctcccaaatggacagaggggatt
gatgagatccagtatgaaatcactcgggttcggcagaagatgaaggatctggctttactt
catgacaagcatatgaatcgacctacacttgatgacagtagtgaggaagagcatgccata
gaaatcactactcaggagataacacagatgtttcaccggtgccagcgagctgtgacgggg
ctgcagactcgctgtggccactgtaccgagcaggaggagaggctgctgagaaacgtggtg
tcgtcgctggctcagagcctgcaggagctctccaccaacttcaggcacacgcagtccggc
tacttaaaacgtatgaagaatcgtgaggagagatcaaagcacttttttgactctggaccc
ctaatggaagaggatgaagatttagctgtatatgacaaggggttcacagacgaccagctg
atgctggtggagcagaacacagttatggtggaggaacgagagagggagatccgacagata
gtgcagtccatctcagatctgaatgagatattccgggacttggctggaatggtggtggaa
cagggcaccgttctcgacagaattgacttcaatgtggagcaggcttgtgtgaaaacagaa
gagggagtgaaacagttacaaaaggcggaacagtatcagaagaaaaaccgaaagatgctg
gtcattttgatcctcttcgtcatagtcatggttctaattgttatactttttggaacaaag
ttttaa
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