Notothenia coriiceps (black rockcod): 104954765
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Entry
104954765 CDS
T04920
Symbol
taf1
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104954765 (taf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ncc01001
]
104954765 (taf1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104954765 (taf1)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104954765 (taf1)
Enzymes [BR:
ncc01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
104954765 (taf1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104954765 (taf1)
Protein kinases [BR:
ncc01001
]
Serine/threonine kinases: Other
TAF1 family
104954765 (taf1)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104954765 (taf1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
104954765 (taf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
104954765
NCBI-ProteinID:
XP_010780263
UniProt:
A0A6I9NZP9
LinkDB
All DBs
Position
Unknown
AA seq
1837 aa
AA seq
DB search
MSDSDSDEDQDRPFSITGFLFGNINEDGQLEDDSVLDDESKKHLAGLGSLGLSSLITEIT
ANEEDDQDEGRDSTNVDADGWVKSTDDAVDYSDISEVAEDETNKYRQAMGSLQPSRQTDD
EEDYDADCEDIDSKLMPPPPPPIVPTAAKKEEPVSQSPTVGEEGDGIILPSIIAPSSNVD
KVDFSSSSDSESETDRPCQGSGAGGPPDSLTLPLAGIMQKDAAKALPGVTELFPEFRPGR
VLRFLRLFGPGKNMPSVWRSARRKKKRKHRDPQPGTPPPEGEPTETSPDKKSGWIYEYAL
PPPPEQCLSDDEITMMAPVESKFSQTCGDGDKETEARPKVAEWRYGPAQLWYDMLGVPED
GSYFNYGFRLKEEQSSEHQEHDTFTKIQETSHKILRREEDDNNENNGGDKDVSDLENELF
LMVTQLKWEEDIIWNGEDVKHKGAKTQRASLAGWLPSSMTRNANAYNAQQGLTRSNSLLV
PPTPPPMPKMPSITGSKREKNSHDHHTSHEEGSPWFSIFPIDSEELVYGHWEENIIWDDQ
EMDHMLMPPVLTLDPNDENIILEMPNEKEEMTSHSPSKENKKETAIKKSRILLGKTGVIK
DEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSISALELRQPFFPTHMGP
MKLRQFHRPTLKKYSFGSVAQPGPHAVQPLLKHIKKKAKMREQERQAAGGGDMFFMRTPQ
DLTGKDGDLILAEYSEEYPPLIMQVGLATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSP
FLGSLHPGQLLPAFENNLFRAPIYLHKMPETDFLVLRTRHGYYIREIVDIFVVGQQCPLF
EVQGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSHSESSIRKRLKLC
ADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMLVAEQRLKDAGYGEKSFF
APDEENEEDFQMKIDDEVRTAPWNTTRAFISAMKGKCLLEVSGVADPTGCGEGFSYVKVP
NKPTQQKDDKEPTPAKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVV
RTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESGEVLSTDTDS
SSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLMGEESDRDHKGRKERR
KGLSSSLSTSSHKDDDTSSVTSLNSAATGRRLKIYRTFRDEDGKDYVRCETVRKASVIDA
YTRIRTTKDEDFIKKFAVFDEQHREEMRKERRRIQEQLRRLKRNQEKDKIKGPPEKKAKK
LKERPDLKVKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHND
NEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPQKKKRRVGNAVHCDYLNKPH
KAIHRRRTDPMVTLSSVLESVINDMRDHPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLR
ENVRKRLYPSRDEFREAVELVVKNSATYNGAKHPITQVAQSMLDLCDAKLKEKEDRLVRL
EKAINPLLDDDDQVAFSFILDNIVTQKMMVVPDSWPFHHPVNKKFVPDYYKVIVCPMDLE
NVRKNISKHKYQNRDVFLFDVSLIHANSIKYNGAESPYTRTALDIISVCKQTLAEYDEHL
TQLEKDISTAKEAALDAADLECLDPMTPGPYTPQPADLFDSGASGSLPRDNSSLFSEGPL
VVAPEKRGGQAEDADGDLEDDDDEEDMLLPPRRQMLDHEEEEEEEEDDGLSNRPAQASVL
YQDLLMSDGEDDASEEEGDNPFSCKSWGGSRKWSQLF
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcagacagcgatgaggaccaagatcgccctttctctataactggcttcctc
tttggaaacatcaacgaagatgggcagctagaggatgacagtgtgctggacgatgagtcc
aaaaagcatttagctggtttgggttctcttggtctgagctcactcattacagagatcact
gcaaatgaggaggatgatcaagacgaaggcagagattctacgaatgtggacgcagatggt
tgggtgaaaagcacagacgatgctgtggattattctgacatcagtgaagttgcggaggat
gagacaaataaataccgtcaggccatggggtctctgcagcccagcaggcaaacagatgat
gaggaagactacgatgccgactgcgaggatattgattctaagcttatgcctcctccgcca
ccacccattgttcctaccgctgcaaagaaagaggaacccgtctctcagagcccaactgtt
ggggaagagggtgatggcatcatcctgccctccatcatcgcgccatcctctaacgtcgat
aaggtcgacttcagcagctcttcagactctgagtcagaaactgaccgtccctgccagggc
tcaggggctggaggccccccagatagtctcaccctccccctcgctggcatcatgcagaaa
gatgctgccaaagcactgccaggggtcacagagctcttcccagagttcaggcctggaagg
gtgcttaggttcttacgcctctttggtcctggaaagaacatgccgtcagtttggaggagt
gctcgcaggaagaagaagcggaagcaccgagaccctcagcctgggacgcctccgccagaa
ggagagcccacagagacaagccccgataaaaagtctggatggatttacgagtatgcgctg
cctccaccaccagagcagtgtctctctgacgatgagataaccatgatggctccggtagaa
tccaagttttcccagacttgtggtgacggggacaaggagacagaggctagacctaaagta
gcagagtggcgatacggtccggcccagctctggtacgacatgcttggcgtcccagaggat
ggaagctacttcaactacggcttcaggctcaaagaagagcagagcagtgagcatcaggag
cacgacacgtttacaaaaatacaagagacttcacataagattctgaggcgagaagaggac
gacaataatgaaaataatggaggagataaggacgtttcagaccttgagaatgagctcttc
ctgatggttactcaactgaaatgggaggaagatattatctggaatggggaggatgtaaaa
cacaagggcgcaaagactcagagagctagcctggcagggtggctgccctcaagcatgacc
cgcaacgccaacgcgtacaacgcacagcagggtctgacgagaagtaattccctgttggtg
ccacccacgcctccccccatgccaaaaatgccttcaatcactggctcgaagcgggagaaa
aacagccatgaccatcatacctctcatgaagaaggctctccctggttctccattttcccc
attgacagcgaggagttggtgtatggacactgggaagagaacattatctgggacgaccag
gagatggatcacatgctcatgccacctgttcttacactggaccccaatgacgagaatatc
atcctagaaatgccaaatgaaaaagaggagatgacttcccactccccgtcaaaagaaaat
aagaaggagacggcaatcaaaaagagccgcatcctgctggggaagacaggggtgatcaaa
gatgagccacagcagaacatgtcccagcctgaagtgaaggacccctggaacctctccaat
gatgagttctactatcccaaacagcagggcctgagggggacgttcggtggcaacatcatt
cagcactccatctcggccctggagctgaggcagcccttcttccccactcacatggggccc
atgaagctgcggcagttccatcgcccgactctgaagaaatactcgttcggatctgtggct
cagccgggtcctcacgctgtgcagccgctgctcaaacacattaagaagaaggccaagatg
cgagagcaggagcgacaggcagcaggaggaggagacatgttcttcatgcgaaccccgcag
gacctgacgggtaaagatggagatctgatcctggcagagtacagtgaagagtacccgcct
ctcatcatgcaagtcggcttggccactaagatcaaaaactactacaagaggaaacctgga
aaggatcctggagcccccgactgtaaatatggagagaccgtgtactgccacacatcccct
ttcctgggttccctccaccctggacagctcctgccggcttttgagaacaacctcttccgt
gctcctatctacctgcacaagatgcccgagaccgacttcttggttctgagaacccgacac
ggctactacattagagagattgttgacatatttgttgttggtcagcagtgccccttattt
gaggttcaagggcccaactcaaagcgagcaaacactcacatcagagacttcctacaggtg
tttatttaccgcctgttctggaagagcaaggaccggccccggagaatccgcatggaggat
ataaagaaagcgtttccctcacactcagaaagcagcatcaggaagcggctgaagctctgt
gctgacttcaaacgtacagggatggactctaactggtgggtgctgaagccggacttcaga
ctgcccacagaggaggagatcagggccatggtgtctccagagcagtgctgtgcttactac
agcatgctggtggcagagcagagactcaaggatgctggatatggtgagaaatccttcttt
gctccagacgaggagaacgaagaggactttcagatgaagattgatgatgaggtgcggaca
gctccttggaacacaacgagagccttcatttcggccatgaaggggaaatgcctgctagag
gtgtcgggcgtggccgaccctacaggctgtggagagggcttctcctacgtcaaagtgccc
aacaagcccactcaacagaaggacgacaaagagccgacgcctgccaagaagacagtgacg
gggacagacgctgatttgaggagactctcgctgaagaacgccaagcagctgctgcgcaag
tttggagttccagaggaagagatcaagaagctctcccgctgggaggtgattgacgtggtg
aggacgatgtccacagagcaggcgcgttcaggcgaggggccaatgagcaagttcgccaga
ggctctcgtttctccgttgcggaacaccaggagcgctacaaggaagagtgccagaggatc
tttgacctgcagaacaaggtgttggagtcgggggaggtgctctctacagacacagacagc
agctcagcggaggacagtgacttcgaggagatggggaagaacatcgagaacatgctgcag
aacaagaagaccagctcccagctttcccgcgagagggaggagcaggagaggaaggagctg
cagaggatgctgatgggggaggagagcgatcgtgatcacaagggacgcaaggagcgacgc
aaaggcttgtccagctccttatccaccagctcccacaaggacgacgacacctcctccgtc
accagcctgaactctgcggccacagggcggagactcaagatctaccgcaccttcagggat
gaggacggcaaggattatgtccgctgcgagacggtgcgcaaggcctccgtcatcgacgcc
tacaccaggatcagaaccaccaaggacgaggacttcataaagaagtttgccgtcttcgat
gagcagcacagagaagagatgaggaaggagaggcggcgtattcaggagcagctgaggagg
ctgaagagaaaccaggagaaggacaagattaagggacctccagagaagaaggccaagaag
ctcaaagagaggccagacctcaaggtcaaattaaagtgtggagcatgtggagccatcgga
cacatgaggaccaacaagttctgcccgctctactatcagaccaacgcgccgccttccaac
cctgttgccatgacagaggagcaggaggaggagctggagaagaccgtcatccacaacgac
aacgaggaactgatcaaggtggagggcaccaagatcgtgctgggcaaacagctcatcgag
agtgctgatgaggtgcgcagaaagtctttagtgctcaagttccccaaacagcagctcccc
caaaagaagaagagacgcgtaggcaacgcggtgcactgcgactaccttaacaaaccacac
aaggccatccaccgcagacgcactgaccccatggtgaccctgtcttctgtgctggagagc
gtcatcaatgacatgcgggaccaccctaatacgtatccgttccacacaccagtgaatgcc
aaggttgtgaaggactactataagatcatcacgcggcccatggacctgcagacgctgagg
gagaatgtgcgcaagagactctacccgtcgagggacgagttccgtgaagccgtggaactt
gtcgtcaaaaacagcgccacctacaacggcgcaaaacatcccataacgcaggtggcccag
tccatgctggacctgtgtgacgctaagctgaaagagaaggaggacaggctggtgaggctg
gagaaagccatcaacccgttgctggatgatgacgatcaggtggccttctccttcatcctg
gacaacatcgtgacccagaagatgatggtcgttcccgattcatggccgttccaccatcct
gtcaacaagaagtttgtccccgattattacaaagtcatcgtatgccccatggatctggag
aacgtccgcaagaacatttccaaacacaaataccagaaccgggatgtgttcctttttgac
gtcagtctcatccacgccaacagtatcaagtacaatggcgcagagagtccttacactagg
acggctctggatattatcagtgtgtgcaagcaaaccttggcagagtacgatgagcacctg
acgcagctggagaaagacatctctacggctaaagaggcggctctggatgcagcagacctg
gagtgtctggacccgatgacgcccgggccgtacacaccgcagcctgctgatctgtttgac
agcggggcgtcagggagtctgcccagagacaacagcagcctgttctctgagggaccgcta
gtggttgctccagagaagagaggggggcaggccgaggacgcagacggagatctcgaggac
gacgatgacgaagaggacatgttgctgccccctcgcagacagatgctcgaccatgaagaa
gaggaggaggaggaggaagacgacggactatctaaccgcccggcacaggccagcgtcctg
taccaggacctgctcatgtctgacggagaggacgacgccagcgaagaggagggcgacaac
cccttctcctgtaagtcctggggaggaagcagaaaatggtcacagctgttctaa
DBGET
integrated database retrieval system
