Notothenia coriiceps (black rockcod): 104954773
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Entry
104954773 CDS
T04920
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104954773
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104954773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
104954773
NCBI-ProteinID:
XP_010780271
UniProt:
A0A6I9P160
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MENLTPEQWREIMNRKMRFPPELIAAIQEGKIEHLRGLLKTGDGILRQLEESEDRQWREA
LNLSIRLGNESCMDVLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDQSIDNSQFAPGVTPLTLACQKDLYDIVAMLTRKGHVIPWPHKISCICLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSEDAMLRAFTLSRELRMLSQKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFDEGIPNLSRLRLAVNFN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLFVSMVIFLTMPFLCLVYWVAPTSKLG
KLLKIPVIKFLLHSASYLWFLITLLGESITMEMYRTKFASRHQDMLHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLGMYLASFALRLLIMLKGFFVCHGHDVTEECVYF
TQAVREDWRQEDPQLLAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVLSPHLGRFNETFHFLFWTMFGVANQDYVDMPQFVVAEF
VGRILYGIFTLVIVIVLLNMLIAMITNTFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAFYYMLRGLFRLICCCCTSNAENKYPPIPSMSNDKEPEEDQIPYRQQVIRA
LVQRYIESARREFEENKRKDIGNRITLLTKTVSKMHGDIKVVQQLLTEEGHPASDPRTNE
GSSFLGKYIIGAKNNFVGFNSKPDEKASSLKVPVHNGEKEGVTDQIETDNNQNVVGDCEA
EGSKQVTDCDVVKMEEGRAKTEVGDQKEPEKKEQMEADNRENTEDEVKVVAGTSFNHVEK
ESKPKAGKGKEDEKLTGGKVSETHTDTTPDTVNSEKTETKSAMNKFREAELKEQKVEPKW
KQGKKFEHEAAGEIAVIEGNAKPGATTTVPSPTGSSLSQDTGFGSEEGDGAIGGTVVRP
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagataatgaaccggaagatgcgattccct
ccggagctcatcgctgccatccaggaggggaagatagagcatcttcgtgggctgctgaag
accggcgacggcatcctccgccagctggaggagtccgaggaccgccagtggagggaggcc
ctcaacctgtccatccgcctgggcaacgagagttgcatggatgtcctcctgcagggggtc
aagttcgacttccggcagattcacgaggccctgctcgtggccgtggacaccaaccagccc
cgggtggtgaagcgcctgctggaccgcctcgaccaggagaaaggaaacaagatggacgtg
cgctccttctcccaggccatctttgaccagtcaattgacaactcccagtttgctcctggt
gtgactcctctgaccttagcctgccagaaggacctgtacgacattgtcgccatgctcacc
cggaaagggcacgtcatcccgtggccgcacaagatatcctgcatctgtctggagtgtcgt
aacggccggcagtacgaccttctgaagttctccttgtctcgcatcaacacctaccgtggc
atcgccagccgcgcctacctgtccgtcacctctgaggacgccatgctcagagccttcact
ctcagcagggagctccgcatgctctcgcagaaagagccagagttcaagcctcagtacctg
ggcctggaggagctctgccaggagtttgccgtggagctgctgggcatgtgtcgtaatcag
agcgaggtgaccaccatcctgaacagctgcggagatgagagccaggactccttggaggag
caggccttcgatgaggggatccccaacctgtcccgcctgcggctcgctgtcaacttcaac
cagaagcagtttgtggcccaccccatctgccagcaggtgctctcctctatctggtgcggg
aacctggctggatggcggggcagcaggacggcctggaagctgtttgtctccatggtgatc
ttcctcaccatgcccttcctctgcctcgtctactgggtcgctccaacgtcaaagttggga
aagttactaaagattcctgtgatcaagttcctcctgcactcagcctcctacctgtggttc
ctcatcacgttactgggagagtcaataaccatggagatgtatcgaaccaaatttgcttcc
cggcatcaggacatgctgcacagctccttccacatggtgtgggtggtcgggttcttctgg
tacgagtgtaaggaggtgtggatcgaggggctgcgcagctacttcctggactggtggaac
tgcctggacgtgatggtgctcggaatgtatctggcctccttcgcgttacgtctgctcatc
atgctcaaaggcttctttgtgtgccatgggcatgatgtcacagaggagtgcgtttacttc
actcaggctgtgcgtgaggactggcgtcaggaggacccccagctgctggccgaggttctg
tttgcagtgaccagcatgctgagcttcacgcggctggcctacatcctgccagctcacgag
tccctgggaactctgcagatctccatagggaagatgatcgatgacatgatgagatttatg
tttatattgatgatcatcggaacagccttcctctgcggcatcaacaatgtctatgttcct
tatgtcctctctccacaccttggcaggtttaatgagacgttccacttcctcttctggacc
atgtttggcgtggctaaccaggactacgtggacatgccccagtttgtggtggcggagttt
gtaggaaggattctgtacggcatcttcaccctcgtcatcgtcatcgtcctgctcaacatg
cttatcgccatgatcaccaacaccttccagaaaattgaggatgatgcagacgttgagtgg
aagtttgcccgctccaagctgtacctcagttacttcagagaaggcctcaccattcccgtg
cccttcaacatcatcccctcacccaaagccttctactacatgttaagaggtctcttcaga
ctaatctgctgctgctgcacttcaaatgctgagaacaaatatcctcctattccctctatg
agcaatgataaggagcctgaagaggaccagataccgtaccggcagcaggtgatcagagct
ctggtgcagcgctacattgagtcggcacgcagggagttcgaggagaacaagaggaaagat
atcggcaatcggatcactttgctgaccaaaacggtcagcaagatgcacggggacatcaag
gtggtccagcagcttctgacggaggagggacacccagcaagtgacccacggaccaatgag
ggctcctcttttctggggaaatacatcattggtgccaaaaacaattttgtaggatttaac
agcaaaccagatgagaaagcgtcatcactcaaagtgccagtgcacaatggagagaaagaa
ggggttacagatcaaattgaaacagataacaatcaaaatgttgttggcgattgtgaagca
gaaggatcgaagcaggtgacggactgtgatgtggtgaagatggaagaggggagagctaaa
actgaggtaggggatcagaaggaacctgagaagaaagagcagatggaagcagacaataga
gaaaatactgaagatgaagttaaagtggtagcagggacaagttttaatcatgtagaaaag
gagtctaaacccaaggcaggaaaaggaaaggaagatgagaagctgacaggggggaaggtg
agtgaaacacacacagatacaactcctgacacagtcaacagtgaaaagacagaaacaaag
tcagcaatgaacaagtttagagaagcagagctgaaagaacagaaagtggagccaaagtgg
aagcaaggtaaaaagtttgaacatgaagcggcaggggaaattgctgtcatagagggcaat
gcaaagcctggagccacaacaaccgtcccctccccaacaggaagcagcctctctcaggac
accggcttcggatcagaagaaggggacggggcgattggagggacggtagtgaggccgtag
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