Notothenia coriiceps (black rockcod): 104954866
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Entry
104954866 CDS
T04920
Name
(RefSeq) PDZ and LIM domain protein 5-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104954866
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
104954866
Domain-containing proteins not elsewhere classified [BR:
ncc04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
104954866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
104954866
NCBI-ProteinID:
XP_010780368
UniProt:
A0A6I9NZZ9
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MTKGPPAIQGRVPKAGLITPSSGIKGNGSASVPRGPVPTRPLPQPHPKDEDTLVQMAEHI
PAGFRTPMCAHCNMVIRGPFLVALGKSWHKEEFNCTHCRKSLADIGFVEEQGTVYCEHCY
EDFLAPTCSRCQDKILGEVINALKQTWHVHCFLCATCQQPIRNNTFHLEEGAPYCEQDFY
SMFGTSCHGCEFPVEAGDKFLEALGYTWHDNCFVCAVCCITLEGQTFFSKKDKPLCKKHA
HTLKI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaggaccgcctgcaatccagggtcgagtcccaaaggctggtttaatcacccca
tcttctggtataaagggtaatggaagtgccagtgtccccaggggtcctgtcccaacccgg
cctttacctcagccccatcctaaagatgaggacaccctggtccagatggcagaacacatc
cctgctggttttcgtacgcccatgtgtgcccactgcaatatggtcatcagagggccattt
ttggtagcattgggaaagtcatggcataaggaggaatttaactgtacccactgccgtaaa
tctctggcagatataggctttgtggaagaacagggcactgtctactgtgaacattgctat
gaagacttcctcgctccaacatgcagccgctgccaggacaagatacttggggaggtgata
aatgccctcaaacagacgtggcatgtccactgctttctgtgcgctacctgtcagcagcca
atcagaaacaacaccttccacctggaggaaggcgcgccatactgtgaacaagatttttac
agtatgttcggtaccagctgccatggctgtgagttccccgttgaggctggagacaagttc
ctagaggcccttggttacacctggcatgataactgcttcgtctgcgctgtgtgctgcatt
actctggaaggccagacctttttctccaagaaggacaaacctctttgcaagaaacatgct
cacacactgaagatatga
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