Notothenia coriiceps (black rockcod): 104954933
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Entry
104954933 CDS
T04920
Symbol
gabrb2
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
ncc04082
Neuroactive ligand signaling
ncc04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104954933 (gabrb2)
04082 Neuroactive ligand signaling
104954933 (gabrb2)
04519 Cadherin signaling
104954933 (gabrb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104954933 (gabrb2)
Ion channels [BR:
ncc04040
]
Ligand-gated channels
GABA-A
104954933 (gabrb2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
104954933
NCBI-ProteinID:
XP_010780440
UniProt:
A0A6I9NZ80
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MGRIRKNHFGILTFSLLVTFVWTQSSKDLKDPSNMPLVKETVDRLMKGYDIRLRPDFGGA
PVKVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIAYNLTLDNRVADSLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGDGAVSGVDRIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYAFVNYIFFGQGPQRQKKAAEKAAVANNEKLRPDPK
WLVGNVVQRDDALYARMKQREIDAYDSMWDPIFVDDAALGLGEQRNKMTPDDNILFSTLE
MKNEMGGGGDLSRGLGAPGDPRNTMLAYDSSTLQYRRAAMARQNYGHSALERHAQKKSRL
RRRASQLKVNIPDLSDVNSIDKWSRMIFPTVFSFFNVVYWLYYVH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggggaggatcaggaaaaaccactttgggattttgactttctctttactagtgactttt
gtctggactcaaagctccaaagatctcaaagatccgagcaatatgcccctggtaaaagaa
acagtggacagactgatgaaaggatacgatattcggttgaggccagatttcggaggtgca
ccggtcaaggtggggatgaatatagacatagccagtatagacatggtctcggaagtcaac
atggactacaccttgacgatgtacttccagcaggcttggcgggacaaacgtctgtcctac
tccgagatcgcctacaacctgacgctggataaccgagtggcggattcgctgtgggtgcct
gacacctactttctaaacgacaagaagtccttcgttcacggcgtcaccgtcaagaacagg
atgatccgtctgcacccggatggcacggtgctttatggactcaggatcaccacaactgca
gcctgcatgatggacctgcgccgctaccctctagatgagcagaactgcactttggagatt
gaaagctatggctacacaacagatgatattgagttttactggcgaggtggagacggcgct
gtgtccggggtcgacagaatagagctgccacagttctccattgttgattataaactcatc
tctaagaacgtggtcttctctacaggttcctacccccgcctgtccctcagcttcaaactg
aagaggaacattggttacttcatcctgcagacatacatgccttccatcctgataaccatc
ctctcctgggtctccttctggatcaactacgatgcctcggctgccagagtggccctgggg
attactacggtgctgaccatgaccaccatcaacacccacttgcgagagacgctcccaaag
atcccctacgtcaaggctattgacatgtacctgatgggctgctttgtgtttgtcttcctg
gccctgctggagtacgccttcgtcaactacatcttcttcggccagggcccccagcgacag
aagaaggcggctgagaaagcagccgtggccaataatgagaagctgagacccgaccccaag
tggctggtgggaaatgtagttcagagagatgatgctctgtatgccagaatgaaacagagg
gaaattgacgcatatgactcgatgtgggatcccatctttgtggacgatgccgcattagga
ctaggcgagcaaagaaataagatgactcccgacgacaacatcctgttcagcaccctggag
atgaagaacgagatgggtggtggcggagatctgtcccggggcctgggggcacccggagac
ccccgcaacaccatgctggcctacgatagctcgacgctgcagtaccgcagggcagccatg
gcccgccagaactatggccacagcgcgttggagcgccacgcccagaagaagtcccgccta
cggagacgggcctcccagctcaaggtgaatatcccagacctgtccgacgtgaactctatc
gacaagtggtccaggatgatcttccccaccgtcttctccttcttcaacgtcgtctactgg
ctctactacgtccattaa
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