Notothenia coriiceps (black rockcod): 104954999
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Entry
104954999 CDS
T04920
Symbol
crtam
Name
(RefSeq) cytotoxic and regulatory T-cell molecule isoform X1
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104954999 (crtam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104954999 (crtam)
04090 CD molecules [BR:
ncc04090
]
104954999 (crtam)
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
Nectin family
104954999 (crtam)
CD molecules [BR:
ncc04090
]
Proteins
104954999 (crtam)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
ig
I-set
Ig_3
Ig_2
C2-set_3
C2-set_2
Nucleoside_tran
Orf78
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
104954999
NCBI-ProteinID:
XP_010780521
UniProt:
A0A6I9P1X0
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MRGGCKHSRVRASVRETEMEVELRFSVFLLLIQVSLAVWQHHVTVSKGHTLRLSCPVTDA
HKTNVEWKNPEEHVMFFNQIQGKDDKALGDKRYSINKLSESKFTMSISNVTFKDGGIYTC
SQYGDHTTEKKVEVTVLGRPTCIVKKEVPEGRFCIECTAEGNRSPPQIFWKLDGGPEIIA
VTRVLHEDKKYVSTDMLCVQSVKNRVTVKCIVRHPALHSKIRMKRVKIGRNSRKSQHTTT
TRSPTARPPGSPEAQRTTRHITTRDLKGPSSEGPKLSTDPTTQLFSSSEPLTVTSAQNSS
STHSHLSDNSTRRRNDTISNATSATATMSQHTTLTRSPTAWPPGSTEAQRTRYITTRDLK
GPSSEGPAELGPSTQLFSSSEPETVTSALNLASSKHSTLSNTSWTSVSETTENTSNNHTE
GNKTDILNDPRMRTGGSSLLVFLVTCLIFGLLVVIIFFAIKLRRAHITWKRENEDSDPSE
ESSKSKSSQEERNSQGQRRRGFFNTAFTQYVVEKPTVITSVTNTAAMAEAEGASKEKNSQ
HPTPGQTSTKCDIKETEL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagaggagggtgcaaacacagcagagtcagagccagcgtcagagagacagagatggaa
gtggagctgcggttcagcgtcttcctgttacttatacaggtttcacttgcggtgtggcag
catcatgtgactgtttcgaaaggtcacacactcaggttaagctgtccagttactgatgct
cacaagaccaacgtggaatggaagaaccctgaagaacatgttatgttcttcaatcaaata
caaggtaaagatgacaaagctttaggagacaaacgctacagcatcaacaaactgtcggag
tcaaaattcaccatgagtatttccaatgttaccttcaaagatggaggcatctacacatgc
tctcagtatggtgatcacacgacagagaagaaagtggaggtcacagtgttaggccgtcct
acatgtatagtgaaaaaggaggtgcctgaagggaggttttgtatagaatgcactgctgag
gggaaccgctctcctccacagatcttctggaaattggatggtggacctgaaattattgct
gttacccgagtcctgcatgaagataaaaaatatgtctcaacggatatgttgtgtgttcag
tcggtgaagaacagagtaactgtgaaatgcattgttcgccatccagctctgcactcaaaa
attcgaatgaaacgtgtcaaaattggaagaaactcaagaaagtcccagcacacaaccacg
acccgttctccaacagcccgtccccccggctcaccagaggcccagagaacaacacggcac
attacaaccagagatctgaaagggccttcatcagagggtccaaagttatcaactgatccc
accactcagctgttttcctccagtgagccactgacggtaacatcagcacagaactcttca
tccacacactcacatctcagcgataactcaaccaggaggaggaatgacaccatcagtaat
gcaacaagtgctacagcaacaatgtcccagcacacaactttgacccgttctccaacagcc
tggcccccaggctcaacagaggcccagagaacacggtacattacaaccagagatcttaaa
gggccttcatcagagggccctgcagagttagggccctctactcagctgttttcctccagt
gagccagagacggtcacatcagcactgaaccttgcttcatccaaacactcaactctcagc
aataccagctggacatctgtctctgagacaacagagaacacctccaataaccacacagag
ggaaacaaaacagatatcttaaatgacccgaggatgcggactggaggaagttcactactg
gtcttcctggttacttgtctgatattcggtcttctcgttgtcatcatttttttcgccatc
aagctcaggagagcgcacatcacttggaagagagaaaatgaggactctgatccatcagag
gagagcagtaaatcaaaatcaagccaggaagagaggaactctcaaggacaaaggcggaga
gggttcttcaacacagcattcacacagtacgtcgttgagaaaccaacagtgataacctcg
gtgacaaacactgctgcgatggcagaagctgagggtgcatctaaagagaagaattctcaa
catccaaccccgggacaaacatcaaccaagtgtgacataaaggagacggagctttaa
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