Notothenia coriiceps (black rockcod): 104955087
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Entry
104955087 CDS
T04920
Symbol
slitrk1
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104955087 (slitrk1)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
104955087
NCBI-ProteinID:
XP_010780619
UniProt:
A0A6I9NRZ1
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Position
Unknown
AA seq
703 aa
AA seq
DB search
MLLWIVLLNAALCVAGGNVTKDICKEQICSCNEIEGDLHIDCEKRSLTTLQHLTGPSSHF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FRKSTFLGLDDLEYLQADFNLLRDVDPAVFRDLNKLEVLILNDNLISALPINVFQHVPIT
HLDLRGNRIKTVPYEGVLEQIPGIAEVLLEDNPWDCNCDLVSLKEWLENIPHNALIGRMI
CEAPTRLQGSDLNETSEADLCPSQSGSVDTSLVAPPTQEEASESEAQVPRPTPYKPSRDT
SGPPTPGHGPKSRSKSRENWQLKTRPTPVMSGENGDRELPHNMTCPQPCKCKLIGTRQGL
GVLCEGNKIESLSNLKPKPLAAHELNMRNNNIHAVKKNHLLGYTSLNLLDLGGNNIKVID
NSTFINQSELRWLYMDKNYLDTLIAEMFVGLGNLEYLSLEYNDIQMIVAGAFSPMPNLRV
LFLNNNLLKSLPNDAFLGISLSKISLHNNYFPYLPVPGVLDQLNSIIQIDLHGNPWDCSC
NIVPFKQWADKLGDDVIVSDLKCESPEEFWKRDFRQVRNDLMCPKLLDKVSPTPLSKNST
FTQDSGTRSNSYLEPNRVSISVLVPGLLLVFVTSAFTVVGMLVFILRNRKRSKRRDGNSS
ASEINSLQTVCDSSYWHSGPYHADGGAHRGFDCSTHLSTTNDA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgctgctttggattgttctgctgaatgcggctctttgtgttgctggtggaaatgttaca
aaggacatttgtaaggagcagatatgctcttgcaacgagatcgagggagatctgcacata
gactgcgaaaaaaggagcctcaccactctgcagcatttgactggcccgagctcgcatttt
tatcacctgctgttgcacggaaattctctatccaggctatttcccaacgagtttgccaac
ttttacaatgctgtgagcttgcatttggaaaacaatggcttgcacgacattgtccccggt
gccttcctgggactgcagctggtgaaaaggctgcacatcaataacaataagatacgatca
ttcaggaagagtacatttctggggttagacgacttggaatatctccaagctgatttcaat
ctactgagggacgttgaccccgccgttttcagggacctaaacaaacttgaagtgttaata
cttaacgacaacctcatcagtgcgctacctataaacgtgtttcaacatgtgcccattacg
catctcgacttgcgggggaacagaatcaaaacggtgccttatgagggggtccttgagcaa
ataccgggcattgcggaggttttgttggaggacaacccgtgggactgtaactgcgacctg
gtttctctgaaggaatggctggagaacataccgcataacgctcttattgggaggatgata
tgcgaggctcccaccaggctgcaggggagcgacctgaacgagacatcagaagcggacctg
tgtccttcacagagcggcagcgtggacaccagcctggtagcccctcccacacaggaggag
gcctctgagagcgaggctcaggttccccgtcccacgccttacaagcccagcagagacacc
agcggtcccccaacgcctggccacggacccaagagccgctccaaatctcgtgagaactgg
cagctgaaaacgaggccaactccagtgatgtcaggtgagaacggggacagagagctgcct
cacaacatgacgtgcccccagccttgcaaatgcaagctgatcggcaccagacagggcctg
ggggtcttgtgcgagggcaacaagatcgaaagcttatccaacctcaagcctaaacccctg
gctgcacacgaattgaacatgcgaaataacaacatacacgcagtgaaaaagaaccacctg
ctcggctacaccagcctcaatttgcttgatctgggggggaacaacatcaaggtgattgac
aacagcacttttataaaccagagcgagctcagatggctgtatatggataagaactatctg
gatacgctgatagcagagatgtttgtgggcctcgggaatctggaatatctcagtttggaa
tacaacgacatccagatgatagtggcaggtgcattcagccctatgcctaatctgagggtc
ctgttcctcaataacaacttgctgaaatctttaccaaacgatgctttccttgggatttct
ttgtccaaaattagtcttcataataattatttcccctatctgcccgtgccgggagtgtta
gaccagctgaattcaatcatacaaatcgatttgcatgggaatccgtgggattgctcgtgc
aacatcgtgcccttcaagcagtgggcggataaactcggagacgatgtgatagtgagtgat
ctcaaatgcgagtcacccgaagagttctggaaacgagatttccgccaagtccggaacgac
ctcatgtgccctaaactccttgacaaagtctcccccacacccctgtccaaaaacagcact
ttcacccaggactcggggacgcgctcaaactcttatttggagccgaacagggtctcaatc
tctgtgctcgtccccgggttgctgttggtgtttgtcacgtccgctttcactgtcgtgggg
atgcttgtgtttatcttgcggaatcgaaagcgatcaaagcggagggacgggaactcctcc
gcctcagagatcaattccttacagacagtgtgtgactcgtcgtattggcacagtgggcct
tatcacgcagacgggggcgcgcacaggggcttcgactgcagcacgcacctttccacaaca
aatgatgcataa
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