Notothenia coriiceps (black rockcod): 104955142
Help
Entry
104955142 CDS
T04920
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104955142 (hps1)
Membrane trafficking [BR:
ncc04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
104955142 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
104955142
NCBI-ProteinID:
XP_010780672
UniProt:
A0A6I9NXG1
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MKCLLISSQSAEVLFHWTDPEFYQNVQAQYGASQEDGHGLPAFEDSISTLFAPIIISCIT
MVDRLGDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEGEGDLRRKIYVMKKMIEVMFG
MVTLSSNLLRRELRPQDTEQRARLWEHLQSLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLSTSDLLTLIIMS
QNMYPSNTDEDDPNPEDIESTSGSGPESFYTPEPSPTDMDSRSSADMPVRESTPLFEFVD
PDVQMAEDSLHTLEVPPPDPSTPRRVFLEVSLKDGLFPMMPHSMYCLPLWPGITLVLLTK
IPTSAVAMSVYTFLEAFAKLEKRLNEGQEGPAATRGQPTIHDIRSKLDKFIKALGASEIQ
SAQLQNVWTDFKNRIGRGGPGFNRELIRSCKNMKTQLCGVYRQCFLIESGTADSPRRLSP
GLQERAQTMVQDKLMDWKDFLLVKSKRNITMVSYLEDFPGLIHFICVDRSTGQMIAPSLN
ITERNVSELGKGPLAQFIKSKVWSLVSTTRRYLQKGYSTVTLRDGDFYFCYFLWFENETG
YKLEAGDIPVLPDDSAPVGMLAWDYYRKLLRYYSKNHQGEVVKCYELLTVHLGVIPTEVI
LQHCRQLASKLWEPSRNPLL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgctgatatccagtcagagcgccgaggtcctcttccactggaccgaccca
gagttctatcagaacgtacaggctcagtacggggcgtcccaagaagatggccatgggctt
ccagcctttgaggacagcatcagcactctgtttgctcccatcattatctcctgcatcacc
atggtggacaggctgggggacagctatacctccttcaccacagagaacaaccatatctac
gtcctacaccagtttgatgagtgtctctacatcgctgtgaatggagatggtgaggaggga
gagggggatctgaggaggaaaatctacgtgatgaaaaagatgattgaagtcatgtttgga
atggtcaccctcagcagtaacctcctcaggagagaactgcgtcctcaggacacggagcag
agagccaggctgtgggaacacctccagagtctgctggagacctacagccacctccgagag
aacgaccagagcttcctagtggaggcagtggagaggctgatacaccccacgctgtgtgag
cagtgcattgagttcctggagcgccgtttggttcagcagctcaacagcagtgtggagcga
gcgggagaggaagtgctgcacgccttcatcctggttcacactaaactactggccttctac
tctagccgcaatgcgagcacactctccacctcagacctcctaaccctcatcatcatgtca
cagaatatgtatcctagcaacacggacgaggatgatccaaatcctgaggacattgagagt
acatctggttctggtcctgaaagcttttacaccccagagccctctcctacagacatggac
tcgagaagttcagcagacatgccagtgagagaaagcactcctttgtttgagtttgtggac
ccagacgtccagatggcagaggacagcttgcacactctggaagttcctccgcccgaccct
tcaacccctcgcagagttttcttagaggtctcactcaaagatgggctgtttcccatgatg
cctcactccatgtactgcctgcctctgtggcccggcatcacacttgtgctgctaactaag
attcccaccagtgcagtggccatgtcagtgtatacgtttctggaggccttcgccaaactg
gagaagcgtctaaacgaaggccaggaaggaccagctgctaccagaggacagcccactata
cacgacatccgcagcaaactggacaaattcatcaaagccctgggggccagtgagatacaa
tccgcacagttacaaaatgtctggacagatttcaagaaccgaatcggcagaggggggcca
gggttcaacagagagcttatccgcagttgtaagaatatgaagacccagctctgtggagta
taccgccagtgtttcctcattgaatctggaacagctgacagtcctcgacgtctctccccc
ggcctgcaggagcgggcccagaccatggtgcaagacaagctgatggactggaaggatttt
ttgttggtaaaaagcaagaggaatataaccatggtgtcgtacctggaggacttcccgggc
ctcatacattttatctgcgtggaccgatccacgggccaaatgatcgcaccgtcgctcaac
atcactgaacgcaacgtgtctgagctggggaaggggccattggctcagttcatcaaaagc
aaggtgtggagtctggtcagcacaacgcggcgctatctccagaagggttactccacggtc
acattgcgcgatggagacttctacttctgctacttcctgtggtttgaaaatgaaactggc
tacaagttagaggcaggggacatacccgtcctacctgacgactcggcccccgttgggatg
cttgcctgggactactacaggaagctgctgcggtactacagcaagaatcaccagggtgag
gtggtgaagtgctacgagctgctgacggttcacctgggggtcatccccactgaggtcatc
ctccagcactgcagacagctggcaagcaaactgtgggagccatctcgcaatcctctgctg
tag
DBGET
integrated database retrieval system
