Notothenia coriiceps (black rockcod): 104955231
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Entry
104955231 CDS
T04920
Name
(RefSeq) neurofascin-like isoform X1
KO
K06757
neurofascin
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104955231
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104955231
Cell adhesion molecules [BR:
ncc04515
]
Immunoglobulin superfamily
L1 family
104955231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
104955231
NCBI-ProteinID:
XP_010780806
UniProt:
A0A6I9P2Q7
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MREMGRLVEPALLLLLWHSVWGFDVPLEVRQPPTIIRQSVKDHIVDPKDTMVIECEAKGN
PHPIFSWRRNGKYLNVARDSQTSMRRRSGTLDIYAWNNPEQYEAEYQCIASNEYGSAYSN
KIRLRLYRAPVWPRDILEPLTVSAGLPLVLSCDPPPGPPKPVTYWMSSCSYARPFNWPIQ
TATPTMQPVRPDRRISMGVNGDLYFSNILFNDSAVDYCCNARFPYKNVIQQKMPVVVKVI
TIRTVAEAAPTWLSPTGSSSSILVLQGEELLLECIAAGVPTPYITWTKNGDDLAVTPRTR
VKNFNKMIQIPKASFDDVGEYGCTATNKLGYIEHTITVRVKAAPFWLEKPTDLVLAPEEN
GRLVCRTDGAPRPTVSWFINGEPIETATPLANRQVSGDTLNLRSVTAENTAVYQCNASNQ
FGYLMANAFVNVLHATPRILGAKSDLIKVIEGRRTLLDCRYFGSPVPELRWSKYGQGTIE
GNRFRTLGNGTLEIKSTQVEDQGTYVCIASNVAGRDESQVRIEVKEPTLIVKRPQNMKVM
RGTDVRFECEVKSDLTTPVTTTWMKDKRQVTLGWRLSLDESNLIITNLIRGDEGNYTCVI
KSELEQKSASARLMVMDRPDPPTNLELSDPYERTVRLSWTPGDSNHNPITEYLVQFDDDD
WLPGKWRNLSTYPGNLNSVILHLTPFTYYEFRLVAINEVGMSRPSRPSTRFQSSGAPPDI
VPKNVKGVGTWRNNMEISWESLSYRDWNGPHLKYLVWWRRRDSREEWKNATTKWVRYYIY
DADTFTPYEIKVQAVNDFGLGPESPVVTGYSGEDRPLTAPLNLRLSDIESTQVTLHWDSV
TRGDMQGELKEYKAYFWRDSSQLRWQRVNRGMKSRSFLVNDPEPSGVLTGLIPYSNYKLY
IVVANNRYEGPPSNNIHFSTPEGVPSTPTSFRIQQRHLDSIYVDWDLPAEPNGIITGYLL
KYQTVNASRGEEERVEEFTPNITSFSLRRYDRYTRYRFSVAAQTRLGIGDWHTEESLHYT
TEIYAQDQVDITTQGWFIGIMCAVALIVLILLIVCFIKRSRGGKYPVREKKDISLEPVDD
KDQEGSFDYRSLERIARISTLPYPRREEERGLQRGQPSIEAIMKRSDSDDSLVEYGDGGE
IQFDEDGSFIGQYTGTRRDVRELDFGASLELHSPMNTIYSLA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagagagatggggagactggtcgaaccagcgctgctgctgcttctatggcacagtgtt
tggggttttgacgtccctctggaagtgaggcagcccccaaccatcataaggcagtcagtg
aaggatcatattgtagaccctaaggacaccatggtcatagaatgtgaagccaaaggaaac
cctcaccctattttctcatggaggcgtaatgggaaatacttgaacgtggcacgtgactct
caaacatcgatgcgcaggcgctcagggacgctggacatctatgcctggaacaatccagaa
cagtacgaggccgagtatcagtgcatcgcctccaatgagtatggatctgcatactccaac
aaaatcagactacgactatacagagctcctgtgtggccgagggacattctggagccattg
acggtcagcgctggcttgcctctggtcctgtcctgtgacccgccaccaggcccgcccaaa
cctgtaacctactggatgtccagctgctcgtatgcgagaccattcaactggcccatccag
acggctacccccaccatgcagcccgtgcggccggaccgcaggatatccatgggagttaac
ggagatctatacttctcgaacatcctgttcaacgactctgctgttgattactgctgtaat
gcacgcttcccatacaaaaatgtcatccagcagaagatgcccgttgttgttaaagttatt
accattcgtacagtggccgaggctgcccccacctggctgtctcccaccggctcttccagc
tccatactggtcctacaaggggaagaactgctcctggagtgtatcgctgcaggagtgcca
actccttatattacgtggaccaagaatggtgacgacctggcagtgacgccacgaacgaga
gtaaaaaacttcaacaagatgattcaaatcccaaaggcctcttttgatgatgtgggtgaa
tatggctgcactgccaccaataagcttggatacatagagcacacaataaccgtcagggtc
aaagccgctcctttctggctggaaaagcccactgatttggtcttggctccggaggaaaat
ggacgcctggtgtgtcgtactgatggcgctcctcgtcccactgttagttggttcatcaac
ggggaacccattgaaactgctacaccgctggctaacagacaggtctcaggagacacactg
aatttacgcagtgtgaccgctgaaaacactgcggtctaccagtgcaacgcttccaatcag
tttggctacttaatggccaacgcttttgttaacgtgttacatgcaacgccacgtattctc
ggggccaagagtgacctcatcaaggtgatagagggaagacgtaccctcttagactgccgc
tactttggctctccagtgcctgaattgcgatggtccaaatatggacaggggactattgaa
ggaaatcgttttaggacgcttggtaacgggactctggagatcaaaagcacacaggtagag
gatcagggaacctacgtgtgtatagccagcaacgtggcaggaagagatgagagccaagtc
cgaatagaggtcaaagagcccactctaattgttaaaagaccacaaaatatgaaagtcatg
cgaggaacagatgtgcgctttgagtgtgaggtaaaatcagatctcactactcctgtcaca
accacctggatgaaagacaaaagacaggtcactcttggctggagactctctctggatgaa
tcgaatctgatcattactaatttaatcagaggcgacgagggcaattacacttgtgtcatc
aagagtgaactggaacagaagtctgcctcagcacgcctaatggtgatggaccgtccagat
cctcccactaatttggagctgtcagatccatacgagcgcactgtaagactcagttggacc
cctggagacagcaaccacaaccctataacagagtacttagtgcagtttgatgatgatgac
tggttgcctggcaagtggagaaacctctcgacgtacccagggaacctcaactctgtcatt
ctccacctcaccccgttcacctactacgagtttcggcttgtcgctatcaatgaagtcgga
atgagtcgccctagtcgtccatctacgcgcttccagagcagcggtgcacctccagatata
gtcccaaagaacgtgaagggtgtgggtacatggaggaataacatggagatcagctgggag
tctctgagctacagagattggaacgggccccacctgaagtatctcgtgtggtggagaagg
agagattcccgagaggagtggaagaatgccaccactaaatgggtgaggtactacatctac
gatgcagataccttcactccttacgagatcaaagtgcaggctgtcaacgacttcggcctg
ggtccagagtctcctgttgtcactggttactctggggaagaccgtcccttaacggcaccc
ctgaacctgagactgtctgacatcgagagcactcaggtgactttgcactgggactctgtg
acacgcggcgatatgcagggagaactgaaagaatacaaggcttacttctggagggacagc
agccagctgaggtggcagagagtcaacagagggatgaagtctagatcttttttagtgaat
gatccggagccgtcgggggtcctaactggactcatcccctatagcaactacaagctgtat
atagtggtggccaacaatcgatatgaagggccgcccagtaataacatacacttctcaacg
ccggaaggagtaccatccactcccacatcctttaggatccaacagcgacatcttgacagt
atttatgtcgactgggacctgccagccgaacccaacggtatcataactggatatttactc
aagtatcagacagtgaatgcttccaggggagaggaggagcgggttgaagagttcactcca
aatataacaagtttctcactcaggcgatacgaccgctacacccgatacagattctccgtg
gccgcacaaactcggctcgggataggggactggcatacggaggagtcactgcattacacc
acagaaatatatgcacaggatcaggtggacatcaccactcagggctggttcatcgggata
atgtgtgctgtggctctcatcgtgctcatcctactcatcgtctgcttcatcaaaaggagc
cgaggggggaaatacccagtacgggaaaagaaagacatttcattagaaccagtggatgac
aaagatcaggagggatcgtttgactacaggtctcttgaaaggatagcacgtatctccact
cttccttacccccgacgagaggaggaaagagggcttcaaagaggccagccgtctatagaa
gcgataatgaagcgatcagacagtgatgacagtctggtggagtacggcgacggaggcgag
atacagttcgacgaggacggctctttcatcggccagtacacaggaaccaggagggatgtc
agggagttggactttggagcaagtctggagctccactctccgatgaataccatctactcc
ctggcgtaa
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