Notothenia coriiceps (black rockcod): 104955248
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Entry
104955248 CDS
T04920
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator isoform X1
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04140
Autophagy - animal
ncc04621
NOD-like receptor signaling pathway
ncc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104955248 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104955248 (tank)
04622 RIG-I-like receptor signaling pathway
104955248 (tank)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TBD
zf-C2HC_3
UPF0242
DUF641
IFT57
Mt_ATP-synt_D
Motif
Other DBs
NCBI-GeneID:
104955248
NCBI-ProteinID:
XP_010780831
UniProt:
A0A6I9P2T7
LinkDB
All DBs
Position
Unknown
AA seq
340 aa
AA seq
DB search
MERNIGDQLNKAYEAYRQVSIEKDNAKRELQQMSVYYESFTQKLQKQIEDQQQLISKLEA
KLSSTRQPPDMKCEPIYHLFDGASAYKKVQYPDNMGTVAPIMPVNSSVDYQDMLEAFEAI
QGKFRQIRSLTRRQKDHLKRFHAGNDASNGNDQRFSMPIQCTDRTAEAQRPFSAVLRSAV
DIPIPPTSLASRGTSPEDRDLVDSFTKLSVKFPPSADSEYDFLNSAPERHIGLTMPTKRP
LSTVPSTLSEEEPVELPMPFVYPPSPSHSTSSSLSQESVRGPQQLLWSPRLCDAADVGTE
LETPPSSSPDKCAFCHAVVSQERMNSHLYLHCSPKNEADN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaacattggagaccagctcaataaagcttatgaagcttatcgccaggtctcc
attgaaaaggacaatgctaaaagggaactgcaacaaatgagtgtgtattatgagagtttc
actcaaaaacttcaaaagcagatagaggaccagcagcagttgatttccaaacttgaagct
aagttatcttcaacaaggcaaccaccagatatgaaatgtgagcctatctaccatctcttc
gatggggccagcgcttataaaaaagtgcagtacccggacaacatgggcactgttgctcct
attatgccagtcaacagcagcgttgactatcaggacatgttggaagcatttgaagcaatt
caagggaaattccggcagattcgctctcttaccagaagacaaaaagatcacctaaaaaga
ttccatgcaggaaatgatgcatcaaacggtaatgatcagcggttttccatgcccatccag
tgcacagaccgtacagcagaggcacagagacccttctccgcagtgctcaggtcagcggtg
gatattccaatcccgccgacgtctctggcgtcccgcggcaccagccccgaggacagggac
ttagtagactctttcaccaaactcagtgtcaaattcccgccctctgcggacagtgaatat
gacttcctgaacagtgcaccagagagacacattggtctgaccatgcccaccaagcggcct
ctcagtactgttccctccacattgtcagaagaggagcccgtggaactacccatgcctttt
gtctaccccccatccccctcccactcaacatcatcttcgctctcccaggagagcgtgcgg
ggaccccagcagctcctctggagccctaggctgtgtgatgcagctgatgtggggacagag
ctggagacgcctccgagcagcagtcctgataaatgtgctttctgccacgctgtggtgtct
caggagcgaatgaacagccacctctacttacattgctctcctaaaaacgaagccgacaat
tga
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