Notothenia coriiceps (black rockcod): 104955300
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Entry
104955300 CDS
T04920
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104955300 (slitrk6)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_LRWD1
LRR_9
SIT
LRRCT_2
FtsL
LapA_dom
Motif
Other DBs
NCBI-GeneID:
104955300
NCBI-ProteinID:
XP_010780887
UniProt:
A0A6I9NY21
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Position
Unknown
AA seq
838 aa
AA seq
DB search
MLPCIISIGLFLTAALSQDIIPSQASSSISESCDSLCWCEEKDGILHLNCEQRNITKISQ
IKVPSGVPFHLNLYKNDLVELRAEEMEGLKNALSLHIGGNSIQELEPGVFSSLGSLKKLH
INSNFLVNLKEDTFQGLVNLEFLQADTNFIRVIEPGAFNKLIRLKVLILNDNVIEFLPNN
IFRFVPLTHLDLRGNKLQTLPYVGFLEHIGRIMELLLEDNKWVCDCDILHLKIWMENMRS
QSAIGDVVCSTPNQLKGTILAKVKKDVLCPSHADINLEEPSKSLDMVVTPSSKASQIPKM
IDAKAPTPSNLPGSPCVEHCSCHNHPVAGFLMHCQDRGIQKVSDIGILQQSPAKLVMTGN
MIQKLLKSDFVTYDSLELLNLANNRIDYIDNETFLSLSSLKKLYLNGNRIEKLFSTMFVG
LHNLEYLYLEYNLIKEIAPGTFNPLPNLKLLSLNNNLLSSLPAQIFRNVPLTKLNLRKNL
LMHLPVSNVLDQLDSLEQIYLEDNPWDCSCDLLSLKQWVEKLRKDTVVGSIYCHSPKKVT
QAELRSLRHEVLCPGLGTYYPLSPGDEVTATLGPDSPGEGLFSSLTDSVPLSVLILCLLM
FILMIIFCSAGLVVFVVHRRRRRAKRKAAEEQPRENSSSPIHLHYSMYGQKTTHHTMTQR
TASASLYEERSHSPIVQICRNPTYCSQHKEHDVDLDYGLDDPSGKNHLCRSIMEKENTSP
LTGNPSSKFRPMTGECPAEFVTLGNPNSFYRNIFEREKELQQLGITEYLRKNMPQLQSAV
DMQVPGHQEELKLMETIMYSRPHKVMLEQTKNEYFELKANLHTEPDYLEVLEHQTAFN
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctgcatcatctccatcggcttgtttctcaccgcagccctatcccaggatatc
attccctcacaggcatcatcgtccataagtgagtcttgtgactcattgtgctggtgcgag
gaaaaagatggcatccttcacctgaactgtgagcaaagaaacatcaccaaaatctcccaa
atcaaagtcccgtcaggtgtgcctttccacctgaacctttacaaaaatgacttggttgag
ctccgcgcagaggagatggaagggcttaagaatgccctttcactgcacatcgggggtaat
agcattcaagagctggaaccaggggtgtttagcagtctcggttcactgaaaaaactccac
ataaatagcaatttccttgtcaatctgaaagaggacacatttcaaggcctggtgaatttg
gagtttctccaagctgacacaaatttcattcgggtcatcgagcccggggccttcaacaaa
ctcatccgcctcaaggtcctcatcctcaatgataatgtcatcgagtttttacccaacaac
attttccggttcgtgcccctcacccacctggacttacgtggcaacaaactgcaaactctg
ccttatgtcggctttctggagcacatcggacggataatggaactgcttttggaggacaat
aagtgggtctgcgactgtgatatattacatttaaaaatctggatggagaacatgaggtcc
cagtcagcaatcggggatgtggtctgcagcacaccaaatcaactaaaggggacgatcctg
gctaaagtcaagaaggatgttctctgcccgtcccatgctgatattaacctggaagagccg
tcgaagtcactggatatggttgtaacgccctcctccaaagcgtcccagattcccaagatg
attgacgccaaggcaccgacaccgtctaacctccccggcagtccttgtgtggagcactgt
tcctgtcacaatcaccctgtggctggctttttgatgcattgtcaggacagaggcattcag
aaggtatcagatatcggaatacttcagcaaagccccgctaaactggtcatgacgggaaac
atgattcagaagctattgaagtcagattttgtcacatatgatagtttagagttgctcaac
ttggccaacaacagaattgattacattgacaacgaaacgttcctcagcttgagcagtttg
aaaaaactctatttgaatggcaaccgcattgaaaaactgttctccacaatgtttgtgggg
ctccacaaccttgaatatctgtatctggaatacaaccttatcaaagagattgccccgggc
acatttaatcccctgccaaacctgaagctgttgtcattaaataacaacctgctcagctcc
cttcctgcgcagatttttcgcaatgtgcccctcaccaaattaaacttgaggaaaaatcta
cttatgcacctgccagtgagcaacgtgcttgatcaactcgactcgctggagcagatttat
ttagaggacaacccctgggactgcagctgtgacttgctcagcctcaaacaatgggtggag
aagctccgaaaagacacagtggtgggctccatttattgccacagccctaagaaagtgacg
caggcggagctgaggagcctccgtcatgaggtgctatgccctggtctggggacctactac
cctctgtccccaggtgatgaagtgaccgccaccctggggcctgacagtccaggagagggt
ttgttcagctcgctcacggacagtgtcccactctctgtgctcatcttatgccttctcatg
tttatcctcatgattatcttctgctcagccggattggtggtgtttgtagtgcatcggcgg
cggagaagagcaaagagaaaagcagccgaggaacagccgagagaaaacagcagcagtcca
attcacttacactacagcatgtacgggcagaaaacgacacaccacaccatgacacagagg
acagcgtctgcctctctgtatgaagagaggtcacacagtcccattgtgcagatctgtcgc
aaccccacctactgctcccagcacaaggagcacgacgtggatttggattatggcctcgac
gatcccagcggcaagaatcacctctgccggagtatcatggagaaggaaaacacttcccca
ctcacaggaaaccccagctcaaagtttcgacccatgactggcgagtgccccgctgagttc
gtcacgctcgggaatcccaactctttctacaggaacattttcgagcgggagaaagagctg
cagcaacttggaataactgagtaccttaggaaaaacatgccccagcttcagtctgccgtt
gacatgcaggtccctgggcaccaggaagagttaaagctaatggagacgattatgtactca
agaccacacaaggtcatgcttgagcaaactaagaacgagtactttgaactcaaggccaac
ctgcacactgagccagactacttggaggttctggagcatcaaactgcatttaactga
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