KEGG   Notothenia coriiceps (black rockcod): 104955423
Entry
104955423         CDS       T04920                                 
Name
(RefSeq) protein polybromo-1-like
  KO
K11757  protein polybromo-1
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104955423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncc03021]
    104955423
   03036 Chromosome and associated proteins [BR:ncc03036]
    104955423
Transcription machinery [BR:ncc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     104955423
Chromosome and associated proteins [BR:ncc03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    104955423
SSDB
Motif
Pfam: Bromodomain
Other DBs
NCBI-GeneID: 104955423
NCBI-ProteinID: XP_010781053
UniProt: A0A6I9P1Z4
LinkDB
Position
Unknown
AA seq 823 aa
MSASSKRRRATSPSSSVSGGGDLDETSSSTPGSGRKRRRTSNAAPVDTIAVCHELFNAVR
DYKDDRGKQLCDVFLRVPKRRNQPDYYEAVSQPMDMTKIQAKLKSEDYNDVEQLTGDFRL
MFNNAKSFYKRDTEEYQSASKLWEVYLQTRNDFLQNEDDEDGDEMMDTPGMSTEEETPTG
NLKEVLEQLLEAIVTHPDPAGRMVSELFQKLPSKVHYPDYYAVIKEPIDLRSITQRIQIG
YYKSINAMAKDVDLMAKNAKMYNEPGSQVFKDANTIKKVFIQRKTDLEHAEPTKSSVRIR
NRRSGQGDRLSGVSVALNYGSESEDDPMLSGSVCYDEGESEAESQSSSMEMSNPIFQLYE
AVRGARNSQGQVFSEPFQHLPSRREYPDYFTQIKLPIALTQIRAKMKNLEYENVDQMETD
LNLMFENAKRYNMPNSSIYKRAFRLQQILQAKKRELLRRDDEDGDSILSSDAGSVKRKSH
KKNVKKNRMKTLYAAVTEAREVGTNRRLCDLFMVKPSKKDYPDYYKVILEPMDMKTIEHH
VRSERYATEEALMEEMRLMFRNARHYNEEGSQVYNDADILEKILKDKRKELGPLPEEEDV
GSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRAELPD
YYATIKRPIDMERLRSHMTGGRYQDTEALVEDFSLMFNNACIYNEPESLIYRDALVLHRV
LLETRKQQEGGEDSVPAAVGPLVRELIRNLFVSVMGHQDEEGRCYSDSLAESPAVDPAAP
EKPPLNFDVIRMNVDRGRYRRLDVFQEHMFEVLEKARRLHRYI
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgtcagccagctccaagaggaggagagccacctctccctccagcagcgtcagtggaggg
ggcgacctggacgagacctcctcctccacgcctggaagcggcaggaagagaagacgcacc
tccaatgctgctcctgtagatacgattgctgtatgccatgagctcttcaatgctgtcagg
gattacaaggatgaccgggggaagcaactttgtgacgttttcctaagggtaccaaagaga
aggaatcagcctgattattatgaagcggtgtcccagccgatggatatgacaaaaattcaa
gctaaactgaagtctgaagactataatgatgtggagcagcttactggagatttcaggctc
atgttcaacaatgcaaaatcattctacaagcgtgacactgaggagtatcagtctgcaagc
aagttgtgggaggtgtacttgcaaacaaggaatgattttctgcaaaatgaggatgatgaa
gatggtgatgaaatgatggatactccaggaatgtcaacggaggaagagactccaactggc
aatttgaaggaagtgttggagcagctcttggaggctatagtgacccaccctgatcccgcg
gggcgtatggtcagcgaactgttccagaaactgccttccaaagtgcattaccccgactac
tatgccgtcataaaggagccaatagatctgagatccatcactcaaaggatacagattgga
tactataaaagtatcaatgccatggccaaggacgtcgacctgatggccaaaaatgccaaa
atgtacaatgaaccaggatctcaggtttttaaggatgctaataccataaagaaagtcttc
atccagcggaagactgatcttgaacacgcagagccgactaaatccagtgttcgcatcagg
aatcgcaggtctggccagggggatcgactttcaggcgtcagcgtagctcttaactacggc
tcagagagtgaggacgaccccatgctctctgggtctgtgtgctacgacgagggagagtca
gaggctgagagtcagagttctagtatggagatgagcaacccaatcttccagctgtatgaa
gctgtgaggggggccaggaacagccagggccaagtcttctctgaacctttccagcacctt
ccctctcgcagggagtatcccgactacttcacgcagatcaagctgcccatcgctctgacg
cagatccgagcaaagatgaagaacctcgagtatgaaaatgtggaccagatggagactgac
ctcaatctgatgtttgagaatgcaaagcgctacaacatgccgaactccagcatttacaaa
cgggcctttaggcttcagcagatcttgcaggcgaaaaagagggaactcctgaggagagac
gatgaggacggagacagcattctgtcatctgatgcagggagcgtcaagagaaagagccac
aagaaaaatgtgaagaagaaccgaatgaaaaccctgtatgctgcagtgactgaggctcgg
gaggtgggaaccaatcgccgtctctgtgatctgttcatggtcaaaccatccaagaaggac
taccctgactactataaagtcatcctggaacccatggacatgaagaccatcgagcaccac
gtccgcagtgagcgctatgccacagaggaggctctcatggaagaaatgaggttgatgttc
cgaaatgcccggcattacaatgaggaagggtctcaggtttacaatgatgctgatattctg
gagaagatactgaaggacaagcgtaaagagttgggacctctgccagaagaagaggatgtg
ggatctcccaaactgaaactgagaaaaagtggtgtttctccaaagaagtccaaatacctc
acccctctccagcagaggttaaatgagctctatgacgccgtgcgcaacttcaccgaccgc
agaggccgccgtctgagcacaatcttcctgcgcctgccatctcgtgccgagttgcctgac
tactatgctaccatcaagagacccatcgatatggagcgcctgcgaagccatatgacgggc
ggccgttaccaagacacagaggccttggtggaggacttttccctcatgttcaacaatgcc
tgcatttacaacgagccggagtctctgatctaccgcgatgctctggtgctgcaccgggtg
ctgctggagacacgcaaacaacaggaggggggcgaggactcggtgcccgctgcggtgggt
cctctggtgcgagagctgatccggaacctgtttgtgtccgtgatgggccaccaggacgaa
gagggccgatgctacagtgactctctggctgagagccccgctgtggatccagcagccccc
gagaaaccaccgcttaactttgatgtcatcaggatgaacgtggaccgaggccgctacagg
aggctggacgtgtttcaggaacacatgttcgaagtgctcgagaaagcaaggaggctacac
aggtatatttga

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