Notothenia coriiceps (black rockcod): 104955471
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Entry
104955471 CDS
T04920
Symbol
scrib
Name
(RefSeq) protein scribble homolog
KO
K16175
protein scribble
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104955471 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PTEN_C2
PDZ_6
LRR_8
PDZ_2
LRR_4
LRR_14
LRR_1
LRR_LRWD1
PTP-SAK
LRR_9
Y_phosphatase
Tc-R-P
DSPc
Motif
Other DBs
NCBI-GeneID:
104955471
NCBI-ProteinID:
XP_010781100
UniProt:
A0A6I9P0Z1
LinkDB
All DBs
Position
Unknown
AA seq
2685 aa
AA seq
DB search
MEEPQRIDLTYITERIITIFCPPECPEEIYLQNLQEILLMLQSKHGHHYMLINLSQKHET
LTQRNHKILDTGWVDHLAPDLDQMVSVCSTMKTWLQTHPKHVLVLHCRGGKGRLGVLVAS
YIHFSNMSDSADLSLDHFAMRRFYNDKLSALMTPSQKRYVWILGSTLKGALRMCPSPTFL
LCVVLHGLPKIKPDGACCLFLRVYQSLQAVCTSAVYHVNAAQTDRLYFVLQPAQLLKGDI
MVVCYDKNSRSASRQVVFRLQFHTGLVHGHTLTFSKADLDCASEDPRFPEEGKVELRFSD
SPEKITGRELWHNGHCVTVDYDTLDPLVRRDSYQDASPLETAPPHVLDPGVRKNIEQGAS
FHLSVSSPGWSDRAPSASSDSGLSVASHGWATAGPRRGAAREKGTQAGRLFPGVDFEIVQ
PLLEVMTELAASGRGEMTGGMEHTINGEASSSERETDILDDEDEVDSEAAPVSDVPSSSS
ICSLSSENLPETQTSSHTEYSTHSWVQQQQMVDVVSDIQLQVDGGERLNRLRKERPPPLV
VPGTPPRGFSSREAVQRGLEDEDGTHNVPLSTDVTHNIQSVNTRQGLSCQEEDLSSLTTD
IDESIEQLNQLILDLDPTFIPVPTSCAPLSRSASLHTNGLSHKGNTNMSGWKQQMKVSDV
TDYAGLHSPGWKGGQSFRGSPAYYSPPFSPAQHGHPYKTNSVDYRGETDGSDIVPPTPGF
PVSPPTPYVKHFSEFSQLRTSGQWDQHSSTQVGCEAALLWALGHCCAQPDGGDPHHTSLA
NLVTLELRDNQLKSLPTSLSFLVKLEQLDLGSNELEVLPDTLGALPNLRELWLDRNQLSS
LPPELGNLRRLVCLDVSENRLEELPSELNGLLALTDLLLTQNLLEDVPDSIGCLKQLSIF
KVDQNRLTQLTDSIGECENLTELVLTENLLESLPRSLGKLKKLTNLNVDRNHLGTVPKEL
GGCACLNVLSLRDNRLGKLPAELADATELHVLDVAGNRLQNLPFALTNLNLKAMWLAENQ
SQPMLKFQTEDDEQTGEKVLTCYLLPQQPSPSLENLLQNSVDDSWTDSNLNRVSVIQFQE
ETKAQEEDDEAAAERRGLQRRATPHPNELKVMKKVIEERRNEAYTSRDEESPDSQEKRLS
DLSNQSHDSQVSNSTLSATSHEERQNVTSQREDFVDGHAPHYDDELDEMEVEYIEPTVHF
AEEPIIRGLDDDDEENREDGERSDEEERPVFPAEKQRLIRKDTPHYKKHFKITKLPKPET
VAALLQGFNPESMNSPTKPAEEEEEEEEEEDEDEEDQGMCTPQHLPRMEALEDSRLQVNS
SLVKGVKFDQVNNLLIEPARIEEEEHSLIIMRQTGGLGISIAGGKGSTPYKGDDEGIFIS
RVSEDGPAARAGVKVGDKLLEVNGVDLHEAEHHTAVEALRSSGASVSMSVLREHMVEPEN
AITTTPLRPEDDYFPRERRSSGIAFNIETAPKGPQERLSTCLLRNDKGLGFSIAGGKGST
PYRTADTAIYISRIAEGGAANRDSTLRVGDRVISINGVDMTEARHDQAVALLTGTSPTIA
LVVERDLNAPGGSPGQSRARAHSPPPPEPSDSPDQEEDGLTMHGNNLSRMEDEYPIEEVI
LLKSGGPLGLSIVGGSDHASHPFGINEPGVFISKVIPNGLACESGLRVGDRILEVNAIDL
RHATHQEAVRALLANKQEIRMLVRRDPSPPGMQEIVINKQPGEKLGISIRGGAKGHAGNP
FDPTDEGIFISKVSSSGAAARDSRLKVGMRILEVNNHSLLGMTHTEAVRVLRAVGDSLVM
LMCDGFDPQKMTGVEASPGIIANPFATGIVRKNSMESISSIDRDLSPEEMEIMQKESEMV
RETSQWEREEMEKVERMRLEREEANRLLEEETENMGTGPLKLDYKTLAALPTTSLQKLNR
FSPSVSLTAPMEAPLQGQYGAPLEPLGFGLGNPTNPLEHTDPEPFSSLNMEHLHESQFSP
NGTSITDSAGSSTTINSSTFAPEEEEGEEENLVDSQPICFKENPFLVANRKGKGRPPGQQ
ILSGPPVGYGKQGQLKPWLFSKAPPSDFNRTESPIRDAPYSPTIQPPSHHSSSSSLCGGR
ETRFANLHYTSTPTAIENSPSSTRPGAIQPVGRMRQSPSPGTPEGHSPNPFQHGPSPFNS
QTSPRAPSPTSPDEFPMNVKQAYKAFAAVPRSLAVLEPPQDQYGVRNNYHPKEPSPEPEL
MNEVFDDVIDGQEGAGLSRHGSPRPHLSPDRREYLSLAAVPRLSRPSWDLQSPSPGGRGS
PEQRSFRDRQKYFEIDVKQQTPEKPKPRVSLVGEDDLKKMREEEERKFEQRAREYLMDED
EEDEEEDLAKQVAQMKATGKVLLDGVEYNVEPVSTPTQHCATPPCYNVTPPSYCGSSGPS
SVDGKGDSQRNSLEDSFRMEQRPNSMTGLIPAYTGDSAAPIRTAKAERRHQERLRMQSPE
LSVASDKDLSPAEKRALEAEKRAMWRAARPCGAEDDVRQYEQDLAKRLYQARVRASQGRD
EAPQPPTSSSSSAASQLRMKSLEQDALKAQMVIAKSRDGKKRGTLDQLTESPSPAPTPSP
TPMEELSARGVTSPGRLSLSSKKFDYRQFAAIPSSKPVYDIQSPDAVEELQFIDDGSSNP
VPAASPEAEVPPPLPATSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
8058 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaccccagcgaatcgatctgacctacatcactgaacgcatcatcaccatcttc
tgcccacctgaatgtccagaggagatctacctgcagaacctgcaggagatcctcctcatg
ctgcagtccaagcatggacaccactacatgctcatcaacctctcacagaaacatgaaacc
ctcacccaaaggaatcacaagattttggacacgggttgggtggatcacctcgctcctgac
ctggatcagatggtcagtgtgtgctcaacgatgaagacctggctgcaaacacatcccaaa
cacgtcctggtgttacactgcaggggaggtaaaggccggctcggagttctggtggcttct
tacatccacttcagcaacatgtcagacagtgcagacctttctctcgaccactttgccatg
aggaggttctacaatgacaaactgtccgctctgatgaccccctcgcagaaacggtatgtg
tggatacttgggagcacattaaagggagcactgaggatgtgtccctctccgactttcctc
ctgtgtgttgttcttcacggtctccccaaaataaaaccagatggagcatgctgtctcttc
ctgagagtctaccagagtctacaagctgtttgcacatcagcagtctaccatgttaatgca
gcccagacagaccggctctacttcgtgctccagccagcccagctgctcaaaggagacatc
atggtggtttgttatgataaaaacagccgctcagccagcaggcaggtcgtcttccgactc
cagttccatacgggcctcgtgcacggacacaccctcactttcagtaaggcggacctggac
tgtgccagtgaagatccccggttcccagaagagggcaaagtagagctgcggttttctgac
agcccggaaaagataacaggcagagagctgtggcacaacggtcactgtgtgacggtggac
tatgacaccttggaccctttggtcaggagagattcatatcaagatgcatctcctcttgaa
acagccccacctcatgtcctggaccctggagtgagaaagaatattgagcaaggtgcttcg
ttccacttgagcgtcagcagccccggctggagcgaccgcgctccgtctgccagcagcgac
tcaggcctgtctgttgcctcacacgggtgggccacagccggaccgaggagaggggctgca
cgggagaagggcacccaggccgggaggctgttccctggggtggactttgagattgttcaa
cctcttctggaggtcatgacagagctcgctgcttcaggtcgaggggagatgactggagga
atggaacacactatcaatggagaggcttcatccagcgagagggaaacggatatattagat
gatgaggacgaagttgacagtgaggcggctcctgtttcagacgtgccgagctcaagcagc
atctgctccctctcctctgagaacctgcccgagactcagacatcgtcccacactgagtac
tccacacactcctgggttcagcagcagcaaatggttgacgtcgtctccgatattcaactt
caagttgatgggggcgagaggttaaacaggttgaggaaagagaggcctccacctctggta
gttcctgggacaccacctcgaggattcagcagcagggaggcagtgcagaggggactggag
gacgaggacggcacacataacgtcccacttagcacagacgttacccacaacatacagtcc
gtcaatactagacagggtttgtcttgccaagaagaggatttgtcttcattaactacagac
attgatgagtccattgaacagctgaaccagctcattttggatttggaccccacttttatt
cctgttcctaccagctgtgcccccctgtcccgatcagcctccctccacaccaatggcctc
agccacaagggaaataccaatatgtcaggttggaagcagcagatgaaggtcagtgatgtg
acggactacgctggtctccatagcccaggatggaaggggggtcagagcttcagaggatcc
ccagcctactacagtccccctttctcaccagctcagcatgggcatccctacaaaaccaac
agcgtggactatcggggagagacagatggttctgacattgtcccacctactccaggcttc
ccagtgtctcctccaacgccctacgtgaaacatttctcagagttttcccagctccggact
agcgggcagtgggaccaacacagctcaacacaagtgggctgtgaggcagcccttctctgg
gctctgggccactgctgtgctcagccagatggaggagaccctcaccataccagcttggcc
aacctggtgacgttggagctcagggacaaccagctgaagtcgctgcctacgtccctctcc
ttcctggttaaactggaacagctggacctgggcagcaatgaactggaagttttgccggac
accctcggtgctctccctaaccttagggagctttggctggaccgtaaccagttgtcctca
ttaccaccagagctggggaacctccggagactggtgtgtctggatgtgtcagagaatcgt
ctggaggagcttccctcagagctgaacggcctcctggcgctcactgacctgctgctcaca
cagaacctgctggaggacgtcccagacagcataggctgcctgaaacagctgtctatcttc
aaagtggaccaaaacagactgacccaactgactgattcaataggggagtgtgaaaacctc
acagaactcgtcttaacagagaaccttttagagtcacttcctcgctcgctgggcaagctt
aagaagctgaccaacctgaatgtagaccgcaaccatttgggcaccgtgcccaaagagctg
ggcggctgtgcctgtctcaacgtcctctctctcagagacaatcgcctgggcaaactgccc
gctgagctcgcagatgccactgagctgcatgtgctggatgtggccggaaatagattacaa
aacctgccttttgccctgacaaacctcaacctgaaggccatgtggctcgcagagaaccag
tcacagcccatgctcaagttccagacagaggatgatgagcagacaggagagaaggtgctg
acctgctatctactgcctcagcagccttcccccagcctcgagaacttgctacagaacagt
gtggacgacagctggacggacagcaacctcaacagagtgtcagtcattcagttccaggaa
gagaccaaggctcaggaggaggacgatgaggctgctgcagagcgcagaggtcttcagcga
agagctacaccgcaccccaatgagctgaaggtgatgaagaaggtgattgaggagaggagg
aatgaagcttacacatccagggatgaagagtctcctgattcacaggagaaacggctcagt
gacctctccaatcagagccatgactctcaggtgtccaatagcacgctgtcggccacctcc
catgaggagaggcagaatgtgacgtcgcagagggaggactttgtagatggccacgcccct
cattatgatgacgagctggacgagatggaagtggagtacattgagcccactgtgcacttt
gcagaagagcccatcatccggggtttggatgacgacgacgaggagaacagggaagatgga
gagaggagtgacgaggaagagaggcctgtgtttcccgcagagaagcagcgtctgatcaga
aaggacacgccgcactacaagaagcacttcaagatcaccaagctgcccaaacctgagact
gtggctgccctgctgcagggcttcaaccccgagagcatgaactctcccacaaagcccgca
gaggaagaggaggaagaggaggaggaggaggacgaggacgaggaagaccagggtatgtgc
acccctcagcaccttcccaggatggaggcgctggaagacagtcggctccaggtcaactcc
agtctagtaaagggggtgaaatttgatcaagtcaataatctgctgattgaacctgctcga
attgaggaggaagagcactcgctgatcatcatgcgacagactggcggcctcggtatcagc
attgctggagggaaaggatctacaccttacaagggagatgatgagggaattttcatctcc
agagtatctgaagatggccccgccgcaagagcaggggtaaaagtgggagacaaactccta
gaggtgaatggagtggacctccacgaagcagaacatcacacggcggttgaagctcttcgg
agctctggtgcttcagtttccatgtctgtgctgcgggagcatatggtggagccggagaac
gccatcaccaccacgccactgaggccggaagacgactatttcccccgcgagagacggagc
agtggcatcgccttcaacatagagacggctcccaaggggccacaggagcggctctccacc
tgcttgctgcgaaacgacaaggggctgggcttcagcatcgcagggggcaaaggctccacc
ccctaccgcacagcagacacagcaatctacatctctcggatcgcagaagggggagcagcg
aacagagacagcacactgcgtgtcggtgacagagtgatctccatcaatggtgtagacatg
acagaggccaggcatgaccaggcagtagcactccttaccggcacctcccccaccattgcc
cttgtggtggagcgagacctgaatgcaccagggggctctcctggtcaatcccgggcacga
gcccactcccctccacccccagaaccctcagactcaccggaccaggaggaggacggcctc
accatgcatgggaacaacctgagccgcatggaggacgagtatcccatcgaggaagtgatc
ctgttaaagtcaggcgggccactaggcctaagcattgtgggaggcagtgatcatgccagt
cacccgtttggcatcaatgaacccggggtgttcatctcaaaggtgattcctaacggccta
gcgtgtgaaagtggactgcgtgttggggaccgaattttggaagtgaacgccatcgatctg
cgtcacgccacacaccaggaagctgtgcgagcgctgctggccaacaagcaggagatccgt
atgctggtgcggagggacccttccccgcctgggatgcaggaaattgtaatcaataagcag
ccaggggagaagctcggcatcagtattcgtggaggggccaagggtcacgcaggaaacccc
tttgaccctacagatgaaggcatcttcatctctaaggtgagttcgagcggtgctgcagca
agagacagcagactgaaggttgggatgcgtatcctggaggtgaacaaccacagcctgctg
gggatgacgcacacagaggcggtgcgagtgctccgggctgtaggagactctctggtcatg
ctgatgtgtgacggattcgacccacaaaaaatgacgggcgtggaggcgtctcccggcatt
attgccaacccatttgccaccggcatcgtccgtaagaacagcatggagagcatctcatcg
atagaccgagacctgagccctgaggagatggagatcatgcagaaggagtctgagatggtg
agagagacatcacagtgggagcgagaagagatggagaaagtggagcgtatgcgcttggag
cgagaggaggcaaaccgcctgctagaagaggagactgagaacatgggcactggacctttg
aaacttgactacaaaaccctggcggctctgcccaccaccagtctgcagaagctcaacagg
ttctctccctctgtcagtctgactgctcccatggaggctcccctgcagggccagtacgga
gctcctttagagcccctgggcttcggcttaggcaaccccacaaatcccctggagcacacg
gaccccgagcccttctccagcctgaacatggaacatctccatgaatctcagttctccccc
aatgggacctccattactgacagtgctggctcatcaacaaccattaactcatcaacattt
gcaccagaagaagaagaaggagaagaggagaacctggtggactctcagcccatctgcttc
aaagagaaccctttcttggtggccaatcgcaaaggaaagggccgtcctcctggacaacag
atcctgtcgggacccccggtgggctacgggaagcagggccagctgaagccctggctgttc
agcaaggcgcctccttctgacttcaacaggacggagagcccaatcagagacgccccctac
tcccccaccatccaaccgcccagccaccactcctccagcagctccctgtgtggaggcagg
gagacccgctttgcaaaccttcattacacttcaactccaactgctatcgagaactctcca
tcttcaacacgaccgggtgccatccagccagtggggcgaatgcggcagagcccctcccct
ggcacaccggagggccacagtcctaaccccttccagcatggcccctcccccttcaactcc
cagacctctcctcgcgccccctcccccacctcgcccgacgagttccccatgaatgtgaag
caggcatacaaggcgtttgccgccgtgcctcgctcactggcagtgctggagcccccccag
gaccagtatggtgtcaggaacaattaccaccccaaggaaccttctccagagcctgagttg
atgaacgaggtgtttgatgatgtcatagacggtcaggagggggctggtctgagccgccac
ggctcccccaggccccacctctctcctgaccggcgggagtatctgagcctggccgcagtg
cctcgcctctccaggccgtcctgggacctgcagagtccctctcctggtggtcggggcagc
ccggagcagcgctccttcagggacagacagaagtattttgagattgacgtgaagcagcag
acaccagaaaaacccaaacctcgagtgtctcttgttggagaagatgaccttaagaaaatg
agggaagaagaagagaggaagtttgagcagcgggcgcgggagtacctgatggatgaagac
gaggaggacgaggaggaggatctggcgaagcaggtggcgcagatgaaggccaccggcaag
gtgttgctggacggagtggagtacaacgtggagccagtgtccacccccacccagcactgc
gctaccccaccctgctacaacgtcacgccgcccagctactgtggcagctcagggccttct
tctgttgatggtaaaggagattctcagaggaactcactagaggacagcttcaggatggag
cagagacccaactccatgactggtctgatcccagcgtacacaggggactctgcggccccc
atccgcacagccaaagcagagcggcggcaccaggagaggctccgtatgcagagccccgag
ctgtcagtggcctccgacaaggacctgtcccctgctgagaaacgagctctggaggccgag
aagagagccatgtggagggcagcacggccctgcggcgctgaggatgatgttaggcagtat
gagcaggacctggctaagaggctctaccaggccagagtgagggcgtctcagggccgggac
gaggccccccagccccccacctcttcctcctcctctgcagcctcccagctcaggatgaag
tctctggagcaggatgcactgaaagcacagatggtcatcgccaagtctcgcgacggaaag
aagcgtgggacactcgaccagctgacggagtcaccctcgcccgcccccaccccctctccc
acacctatggaagagctcagtgcccgaggagtcacctctccgggtcggctgtccctgtcg
tcaaagaagtttgactaccgacagtttgctgccattccttcttccaaacccgtatacgac
atccagtcccctgacgcagtggaagagctgcagttcattgacgacggctccagcaaccca
gttcccgctgcgagccctgaggctgaggtgccccccccgctgcctgccacctcggccctg
gaggagatggccctgtacagcaacaagcgcaaactgaggcagggccgccgcagcctggag
accgccgtgcccacgtaa
DBGET
integrated database retrieval system