Notothenia coriiceps (black rockcod): 104955488
Help
Entry
104955488 CDS
T04920
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104955488
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104955488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_jaz
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
104955488
NCBI-ProteinID:
XP_010781117
UniProt:
A0A6I9NYT9
LinkDB
All DBs
Position
Unknown
AA seq
1652 aa
AA seq
DB search
MEALHSRLTTGEQSGGQEHCQPESPPPQNKSPPQTRRQQQTGSPKPHDTLPQPKQSRRQH
PGRKRLRHQRQSVDSDAAPEHKHEATKTTTASSPSPGSPSSAGGPSESKPDSQEGTPKQK
RERKPQRPGKYVCSYCGRACAKPSVLQKHIRSHTGERPYPCAPCGFSFKTKSNLYKHRKS
HTHRVKAGLTLGEPRSLEEQATESEDETRQLSSASTLLERRDSVASIKSHETDRAKDCTG
GSDDSFAVKKRLALRLSRGKHGQRDSSDEKTSSLVLGSKGSTESGYFSRSESTEQTQDSP
PNTSAKSYAEIILGKYGRLGHLQRMSRHHNQQPSGQEDKSIPFTVPKKQVIDHITKLITI
NEAVVDTSKIDSVKPRRFSLSRKNSSDAKKSSALKETLVQSPKAVDLGYKGGSITMGVPC
EKFHHPSLKVEQPAGQTSSAPLLRSNSMPSAASSFDASSGGLSKFRLSQSFDERQPVSRR
YGMLRRQPAIEIPIGAEITQEEHEVSHSLFPDSVTTVPDHTLSQPQPYECEACGTGCKDW
EGYKKHKQSLCLAHHPRNEVVISQMGCSQLINHAVRAGASAMRKRRKEESFEFDDPSSPS
LPSPALLSGKCKDESSLAYESPRRPTLQTCSVIQHTSSFEKQESLCNENQDPHEEYQLVP
QKEPSTKQATRKLVRQHSVLVPEILVTEDSNMSTASSTETSSIAKHSEKPEEFQWPQRSP
SLAQLPIEKLPPKKKRLRLAEIAQSSGESSFDSISLPRSPSQDSSASYASSRSTSFEESN
RPDMELAGSTPLRRSRAAQMLMVPGVHQHREMRRSASEQAPHDPQLSVLMSETRSKSFDY
SCLSPERSAVGWRERRKCLLVRHTAIRDPDEEEEEEEERCTIQNHSPERLSSTTTSKASP
TSTYRPPASPSLGDPVLRNPVRLQCKEIFSQWKLSQNIQLTGGTELTSVDPVNEEVSNIQ
TEQPTPPAPQPYPSHAASGAARARYLPMSTGLKLEIPLLHEDYSEVRVTPSVPLISSSLE
LVRPVTSPAVAVRLQTDTLTLACAIYTTYSQPSPPRPPDAFDSHNIGIPKAEYRNHRYAS
TDVQLWPDDGLRGSGSGGNKRMLSPSNSMELPSESKQQQKRVKEEEGKEVGRVDKASVDT
CNQELKHQTSSVYTPITHVGTSYPSLQSGTCNSWCYLNYIKPNPSPLDEQKPSVYSSWST
SGYDPNPPGLSSKTALSLLQCKQRLSPSIYTFSPMTVRTTESMEQEDNRRPCSTEVYNSQ
SFCRDREETRQQSNEKEEQEKKNDEEDEEVQSCSRSQQPPDVWKSERGSNEKHPLVHGDG
DGGGKKCQSEDSGSNLPTCSHGVTQSPSNTCLKDKGSSVEHLRSEAHGEETVCYPDAINK
GGCEERPLPPDTSQNNEDNKDGRRDEDTSSKAPEIPHPASPEGDKPHPGGQEMKLDQKES
PRRSSASAMRAAFARRRLDASTSSGESARTKETSPPQSLSPPPSSPSTSSCHVSISTLTP
LTVQCHTRLPPRDRPTTARQYVDEVGLTLTPPHPPRPRGNHNLLSHLPLHSQQPGRTPTP
LIPIGGIHMITPRSTMPLYSLESRPSAGASWRLGGFPPLQRHETLEGTQRDPEVLVGIQR
NTRGGVQQPSSPGEEARHPGIDTERRAVLKKT
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttgcatagtcgcctgacgactggggagcagtccggaggtcaagaacattgt
caaccagagtctcctccccctcagaataagtctcccccccagactcgtcgacaacagcaa
actggctctccgaagccccatgacacgctaccgcaacccaaacagtccagacgacagcat
cctggacgcaaacgtctcaggcaccagcggcagagcgtcgactcagatgcagcgccagaa
cacaaacatgaggctacgaaaacaaccacagcttctagtccatcaccgggctcgccttcc
tcagcaggaggacccagcgagtccaaaccagacagccaggagggcaccccaaaacagaaa
cgagagcgcaagcctcagagaccgggcaaatatgtctgttcgtactgtggccgtgcgtgt
gcaaagccaagtgtgctgcagaaacatattcgttcccacacgggtgaaagaccctatccc
tgcgccccatgcggcttctcttttaagaccaagagtaacttgtacaaacaccgtaaatcg
cacacccacagggtgaaggcaggtctgacccttggggagccgagatctttagaggagcag
gcgactgaatcagaagatgaaaccaggcaattatcctcagcatcaacccttttagaaaga
cgagacagcgtagcctcaatcaagagtcatgaaacagacagggccaaagattgcacagga
ggaagcgatgactccttcgcagtgaagaagagactggctctgcgtctaagtagagggaag
catggtcaaagagactcatctgatgaaaagacctcatctctagttttagggagtaaaggc
agtacagagtcaggatatttctctcgctctgaaagcactgagcagacacaagacagtcca
ccgaacacaagtgccaaaagctacgcagagatcatcctcggcaagtatggacgtctcgga
caccttcagaggatgtctcggcaccataaccagcagccctctggtcaggaggacaaaagc
atcccgttcacagtgcccaagaagcaggtaattgaccatatcaccaaacttatcacgatc
aacgaggcggtggtggacaccagtaaaattgacagtgtaaaaccaaggagattctcactc
tccaggaagaatagttcagacgctaaaaagagttcagctctgaaagaaacacttgttcaa
agtcctaaagctgtagatctgggctacaaaggtggctccataaccatgggagttccatgt
gagaaatttcatcatccgagcctaaaagtggagcaaccagctggtcaaacatcttccgct
cctttgttgagaagcaactcaatgccatctgcagctagttcgtttgacgcctccagtggt
ggactcagtaaattccgcctaagtcagtcttttgatgaacgacagccggtgtcccgtcgt
tatgggatgctaagaaggcagccagctattgaaatccctattggagccgaaataacacaa
gaggaacatgaggtttctcattcccttttccctgacagcgtcaccactgtgcctgaccac
acgctaagccaaccgcagccgtatgagtgtgaggcctgcggcaccggctgcaaagactgg
gaaggttataagaaacacaaacaaagcctatgccttgcacatcatcccagaaacgaggtg
gtcattagtcaaatgggatgctcccagctaattaaccatgcagtcagagcaggagcttca
gcaatgcgaaagagaaggaaagaagagagttttgaatttgatgatccctcttcgccgtca
ttaccctctccagcgctcttgtcggggaagtgtaaagatgaaagcagtttagcttacgag
agtccaagaagacctacactacaaacctgttcagtaatccaacatacaagttcatttgaa
aaacaggagtctttgtgcaatgagaatcaagaccctcatgaagaatatcaactggtgcct
cagaaagaaccgtcgaccaaacaagcaactcgaaagctggtccgccaacacagtgtgctg
gtcccagaaatactggtcacagaggactcaaacatgagcacagcgtcctcaacagagacc
tcatccatagcaaaacattcagagaaacctgaggagtttcagtggccgcagagaagcccc
tctctggcccagctccccatcgaaaagctccctccaaagaagaagcgcttacgtctggct
gagatcgcccaatcctcgggggaatccagtttcgactccatatccctgcctcgcagcccg
agtcaggacagtagtgcatcttacgcatccagtcggtccacgtcctttgaagagtcgaac
agaccagacatggagttagcaggatcaacccctctgaggagatcaagagcggctcaaatg
ttgatggtgcccggggtgcaccagcaccgagagatgaggcgttcagcttcagagcaggcg
cctcatgacccccaactgagtgtcctcatgtctgagactcgcagtaagtcatttgactac
agttgcctgtcgcctgaacgctctgcagttggctggagggaaagaaggaaatgcctcctt
gtgagacacactgctattagagatccagatgaggaggaggaggaggaggaagagcggtgc
acgatacagaaccatagtcctgaacgcctcagctctacaacaacttctaaagcaagtcca
acttctacgtacaggcctcctgcttccccgtcattaggggatccagtcctgcgtaatcca
gtgagattacaatgcaaagagatcttctcccagtggaaactaagtcaaaatattcagtta
accggcggcacagagctcacatctgtagatcctgtgaacgaggaggtctcgaacatccaa
acagagcaacccacgcctccagccccacaaccgtacccttcacatgcagcatcaggtgca
gccagagctcgatacctccccatgtctacaggactgaagctagagatcccccttctacat
gaggattactcagaggttagagttactccgtccgtccctcttatatcttccagtctagag
ttggttaggccggtcacgtctccagcagtagcagttcgtctccaaacagacaccctcacc
cttgcatgtgccatatacacaacatattctcaacccagccccccaagacccccagatgcc
tttgattcacacaatataggcatccctaaagctgaatatagaaaccacaggtatgcaagt
acggacgttcaactgtggcctgacgatggcctgaggggatcgggctcaggggggaacaaa
cgcatgctttcgccttcaaatagcatggagcttccgtctgagtctaagcagcagcagaaa
agagtgaaagaagaagaggggaaggaggtgggaagggttgacaaggcatcagtggacacg
tgcaatcaggaactaaaacatcagacatccagtgtttacactcccatcacacatgtggga
acatcataccccagtctgcagtccggcacctgtaatagctggtgctatttgaactacatt
aaaccaaacccttcccctctggatgaacagaagccctcagtgtattcatcctggtccacg
agcggctatgaccccaacccacctggcctctccagcaagacagcgctctctctgctgcag
tgcaagcagaggctcagtccctccatctacaccttctcccccatgacagtcaggacaaca
gagtcaatggaacaagaggacaacagaagaccatgctcaactgaggtgtacaacagccag
tcgttctgcagagaccgagaggaaacgaggcagcagtcaaacgaaaaagaggagcaggag
aagaagaacgatgaggaggatgaggaagtacagtcatgctccagaagtcaacaacctcct
gacgtctggaaatctgagagagggtcaaatgagaagcatccactcgtgcatggtgatggt
gatggtggagggaagaagtgccaaagtgaggacagtggatccaacctgccaacatgcagc
cacggcgtcacacaatccccatcgaacacctgtctcaaagacaaaggaagcagcgtcgaa
cacctgagatctgaagcacatggagaagaaaccgtttgttacccggacgccataaataaa
ggaggctgtgaagaacgtcctcttcccccagatacaagtcaaaataatgaagataacaag
gatggccgtcgtgatgaagacaccagctccaaagcacctgaaatccctcaccctgcctcc
cctgagggagataaacctcacccaggaggtcaggagatgaaactcgatcagaaagaatcc
cctcggaggagctcggcctccgccatgagggccgccttcgcccgcagacgattagacgca
tcaacgtcctccggagaatctgcacgaactaaagagacgtctccccctcagagcctttct
cctcccccctcctccccctccacatccagttgtcatgtctccatctccaccctaactcct
ctaacagtgcagtgtcacacccgtctccccccgagagacagaccgactacagcgagacag
tatgtggatgaggttggtctgaccctcacccccccacatccccctcgaccccgagggaac
cataacctcctgagtcacctccccctgcactcccagcagcccggccggacccccaccccc
ctgatccccatcggtgggatccacatgatcacgccccgctccaccatgcccctctacagc
ctggagagcagaccctcagccggggcgtcttggaggctgggggggtttcctccgctgcag
cgccacgaaactctggaaggaacgcagcgagacccagaggtgttggtgggaatacagaga
aacaccagaggaggtgttcaacaaccgtcgagtcccggggaagaggcaagacatccgggt
atcgatacggaaagacgtgctgtgttgaagaagacttga
DBGET
integrated database retrieval system
