Notothenia coriiceps (black rockcod): 104955558
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Entry
104955558 CDS
T04920
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104955558
Enzymes [BR:
ncc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
104955558
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104955558
Prokaryotic type
104955558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
104955558
NCBI-ProteinID:
XP_010781205
UniProt:
A0A6I9P183
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MLQSICRSTSFLRQYLKVVAQSDQGPTSLFSTKAKAFTSQAIMSEKKRKSTSAAASAVKE
PGAKQQKLDPTKEKGWLKDSLKHQRTKNKQMKFNRKRLRYTSNTERIKQGSEGVLYWMSR
DHRVQDNWALIHAQQLALKEKLPLHVCLCLFVPKSELSTLRHYSFMLKGLKEVEKECKAL
DIQFHLLHGSAGDVLPGFVSDRELGAVVTDFSPLREPLQWLEDVKKTLPKDIPLIQVDAH
NIVPCWVASPKLEYAARTIRGKLTKLLPQFLTDFPLAEKHPYTTTITAKLIDWEKTLASL
QVDQDVGEPEWAMPGTKGGVAMLESFIDERLKLFATQRNDPNIAGLSQLSPWIRFGQLSA
QRVALQVQQCGSSAGPAVASFIEELVVRRELTDNFCFYNEKYDRVEGAYEWAQKTLKDHA
EDKREYLYTREQLEKAKTHDKLWNASQYQMITEGKMHGFLRMYWAKKILEWTSSPEEALS
IALYLNDRYSLDGQDPNGFVGCMWSICGTHDQGWKEREVFGKIRFMNYKGCQRKFDVAKF
ERKYCPKNL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagagcatttgcaggagcacatctttcttgaggcaatacttgaaagttgtcgcc
caaagtgatcagggacccacttcattattctcaacaaaggccaaggcattcaccagtcaa
gccatcatgtcagagaaaaaacgaaagtctacatctgctgctgcttctgctgttaaggag
cccggtgctaagcagcagaagctggatcccacgaaggagaagggctggctgaaggacagt
ctgaagcatcagaggacaaagaacaagcagatgaaattcaacagaaaacgcctccgctac
acatctaacactgagaggataaagcagggctcagagggtgtcctgtactggatgtcacga
gaccacagagtacaagataattgggctctgatccatgcccagcagcttgctctgaaggag
aagcttcctctgcacgtctgtttgtgcctgtttgtcccaaaatcagagctatccaccctg
agacattacagcttcatgctgaaaggtctgaaagaagtcgaaaaggagtgcaaagcctta
gacatccagttccacctgctccatggttcagctggagacgttctccccggctttgtgtct
gatcgagaactgggcgcagtggtaacagacttctcccccctcagagagccactgcagtgg
ttggaggatgttaaaaagactcttccaaaagatattcccctcatacaggtagatgcccac
aatattgtcccctgctgggtagcctcacctaaacttgagtacgccgccaggacaatcaga
ggaaaactcacaaagcttctcccgcagttcctcactgactttcctctggcagaaaaacac
ccctacacaacgacaataaccgccaaactcatagactgggaaaaaaccctagcctccctg
caggtagaccaagatgtaggagagccggagtgggctatgccgggcaccaagggaggggtg
gccatgttggagtccttcattgatgaacgcctcaaactattcgctactcaacgcaacgac
ccaaacattgcaggccttagccagctgtccccctggatccgctttggccagctgtcagcc
cagcgtgtggcgctgcaggttcagcagtgtggaagctctgcaggtccagctgttgcctcc
ttcatcgaggagctggtggtgcgcagggagctgacggacaacttctgtttctacaacgaa
aaatacgaccgcgttgagggggcgtatgaatgggctcagaagactttaaaggatcatgcc
gaagacaagagggagtatctctacacacgggagcagctggagaaagcaaagacacatgac
aaactctggaatgcctctcagtaccagatgatcactgaggggaagatgcatggtttcctg
aggatgtactgggccaaaaagattctggagtggacttcttcaccagaggaggcgctctcc
atcgcgctctacctaaacgaccgctacagtctggatggccaggaccccaatggctttgtc
ggttgcatgtggtctatctgtggcacccatgaccaaggctggaaagagagagaggttttt
ggaaagatccgcttcatgaactacaaaggctgccagcggaagtttgatgtagctaagttt
gagagaaagtactgtccaaaaaacctctaa
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