KEGG   Notothenia coriiceps (black rockcod): 104955592
Entry
104955592         CDS       T04920                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein isoform X1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104955592 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncc03000]
    104955592 (tbp)
   03021 Transcription machinery [BR:ncc03021]
    104955592 (tbp)
Transcription factors [BR:ncc03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    104955592 (tbp)
Transcription machinery [BR:ncc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104955592 (tbp)
  RNA polymerase III system
    TFIIIB
     104955592 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     104955592 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 104955592
NCBI-ProteinID: XP_010781252
UniProt: A0A6I9NZ73
LinkDB
Position
Unknown
AA seq 301 aa
MDQNNSSASPFQGLASPQGAMTPGMPIFSPMMPYGSGLTPQPVVANSLSILEEQQRQQQQ
QQAQQANAGLPGTSGLTPQLYHSQTVAGSTTTALPGNTPLYNTPLTPMTPITPATPASES
SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGK
MVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ
QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGFRKT
T
NT seq 906 nt   +upstreamnt  +downstreamnt
atggaccagaacaacagttcagccagtcccttccagggactggcctcccctcagggtgcc
atgaccccaggcatgcctatcttcagtcccatgatgccctatggctcaggtctgacacct
cagcccgtcgtggccaacagtttgtctatactggaggaacagcagaggcaacagcagcag
caacaggcacagcaggcaaacgcaggtcttcctggaacgtcagggctaacccctcagctt
taccattcccagacggttgcaggctcgaccaccacagcgctgccagggaacaccccgctc
tacaacaccccgctgacccccatgacccccatcacaccggcaacacctgcctcagagagc
tctggaatagtaccacagctacaaaacatagtatctactgtaaatctgggctgtaaactg
gatttgaagaccattgccctgagagccaggaatgcagagtacaacccaaagcgttttgct
gcggtcatcatgagaatacgagaacccaggaccacggctctcatcttcagctctgggaag
atggtctgcacgggagccaagagtgaggagcagtcgaggttagctgccagaaaatacgct
cgtgtggtgcagaagctcggctttcctgctaagttcttggattttaagattcagaacatg
gtgggaagctgcgatgtgaagttccccattcgactggagggattagtcctcacacatcag
cagtttagcagctacgaaccggagctgtttccaggactgatttacagaatgatcaaaccc
agaatcgtcctgctcatctttgtttctgggaaagttgtactcacaggcgccaaagtgagg
ggagagatctacgaagcgtttgaaaacatctatcccatcctgaaaggcttccgcaagaca
acgtag

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