Notothenia coriiceps (black rockcod): 104955661
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Entry
104955661 CDS
T04920
Symbol
clasp1
Name
(RefSeq) CLIP-associating protein 1
KO
K16578
CLIP-associating protein 1/2
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104955661 (clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104955661 (clasp1)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104955661 (clasp1)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104955661 (clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
TOR1L1_N
HEAT
HEAT_EZ
Cnd1
HEAT_DAAF5
HEAT_GCN1
TAN
MMS19_N
INTS1_R4
Paxt-1_C
DUF2726
DFRP_C
DUF3450
Motif
Other DBs
NCBI-GeneID:
104955661
NCBI-ProteinID:
XP_010781346
UniProt:
A0A6I9P4F9
LinkDB
All DBs
Position
Unknown
AA seq
1581 aa
AA seq
DB search
MKRTEDKAKLKELEKHKIQLEQLQEWKNKMQEQQADLQKQLKEAKKVALLGLDLLSALVT
RLQERFRSHVGTVLPSLIDRLGDSKDQVREQDQTVLLKIMEQAASPQYVWDRMLGGFKHK
NNRTREGVCLCLIATLSIHGAQGLTLSKIVPHICNLLGDPTSQVRDGAMSCLVEIYRHVG
ERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMMPSSVSDKNFEDEDSVDGGRSSSSSSS
KAPPGGRRTVISSVRRPSSASANKPTSKEAAAGAVDEDDFIKAYEDVPSIQIYSNRELED
HLAKIREVLSDEKHDWELRVVALKKVRSLLMAGATEYEGFPQQLRLLEAPLKLSAKDLRS
QVVREACITLGHLSLILGNKFDHGAESIMPTLLNLVPNSAKIMATSGVATIRLLLRRTHY
PRLIPIITSNCAAKSVAVRRRCFEFLDLMLQEWPTNTLERHVAVLTETIKKGIHDADSEA
RSIARKCYWGFHGHYSREAEHLFQALESPYQKALQSHLKGSDSIVSLPQSDRSSSSSQES
LNRPLSVKSVIGGSMTRSKLVGSRVSPSSGSLQRSRSDIDVNAASSSKSRLSTVPASSPF
SSAAALPPGSYASLGRVRTRRQSSGSTGGASPSVVDSRGRSRAKIVSQSQRSRSANPINA
GSRSSSPGKLLGHSSYGRVPRVSVSASTTPADKRSRVPRSQGCSRDTSPTRLGLASLCGK
ALLPAALPYRTLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLASRRHSRSTSALS
TADPHSQSDRYGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYE
SPGIYSDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLL
GLQNLFKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVLVHREDLQDWLF
VLLTQLLKKMGADLLGSVQAKVQKALDITRDSFPFDQQFNILMRFIVDQTQTPNLKVKVA
ILKYIDTLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHSWVSEELAGRSSP
AALLSAEGNQEDRCKQAAQVVLIALFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSS
NTSSSVGSPSNTIGRTPTRHTPSRTSPLTSPTNCSHGGLSPSRLWGWGGDGLSKHPPAPP
PPPPPQPHSTPAAPSLRVLRRAYSPSMMEYDTENMNSEEIYSSLRGVTEAIQSFSYRSQE
DLNEPIRQEGKRDDAAGREGVASSPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSG
PRGREFAPYGYGETICTYDKSAMKEAVFDDDVEQFRDCRRQESGENKMTLPKVFAPAGGQ
DHSDLVADLLKELSNHNERSEERKGALVELLKITREDNLAVWDEHFKTILLLLLETLGDK
DHTIRALALRLLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSI
HPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAKDSLLLLLPDIIPGLLQMKLLNLY
IKRAQTTNSNSSSSSDVSSHS
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggactgaggacaaagccaagctgaaggagctcgagaaacacaagatccagctg
gagcagcttcaggagtggaagaacaaaatgcaggagcagcaggctgacctgcagaaacag
ctcaaagaagctaagaaggtggctctgctcggcttggacctcttatctgccttagtgacg
aggttacaggagagatttaggtcccacgtgggaacagttcttcccagccttatcgatcga
ttgggagattctaaagaccaagtgcgagaacaggaccaaacagtgctgctaaagatcatg
gagcaagctgccagcccacagtatgtgtgggaccgaatgctgggaggcttcaaacacaag
aacaacaggaccagagaaggagtgtgcctttgtctcatcgccacactgagcatacatgga
gctcaaggcctgaccctgagtaaaattgttccccacatatgtaacctgttgggggacccc
acaagtcaggtgcgtgacggagcgatgagctgcttggtggagatctacagacatgtgggg
gagagggtgaggatggatctcagcaaaaagggcctgccacagtcacggttgaatgtaatc
ttcagcaaatttgatgaagtccaaagatccgggaacatgatgccatcgtccgtctcagat
aagaattttgaggatgaagactcagtggatggaggccggtcctcctcctcttcatcatcc
aaagcaccccccggtggcaggaggacggttatcagctctgtgcgaagacccagctcagcc
tccgcaaataagcccacaagcaaggaagcagctgctggtgctgttgatgaggacgatttc
atcaaagcctatgaagacgtgccctcaatccagatctactccaacagagagctggaggac
catctggccaaaatcagagaagtgctttctgatgaaaaacacgactgggagctccgggtt
gtagcgctgaagaaggtgcgttctctcctgatggcgggggccacagagtacgagggcttc
cctcagcagctgcgtctcctggaggctccgctcaagctgtcggccaaagacctgcgctca
caggtggtgcgcgaggcctgcatcacactgggacacttgtctttgatactgggaaacaag
tttgaccacggagcagagagcatcatgcccacgctgctcaacctcgtgcccaacagtgcc
aaaatcatggccacgtccggagtggccaccatccgcctcctcctcaggcgcacacactac
ccacgtctcatccccatcatcaccagtaactgcgccgccaaatcagtggcagtccgacga
cgctgttttgagttcctagacctcatgttacaggagtggcccactaacacattggaaaga
cacgtggcggttctgactgagaccatcaagaaaggcatccacgacgctgactctgaggcc
agatccatcgcaaggaaatgctactggggtttccatggtcactacagccgggaggcggag
cacctgttccaggcgctggagtcgccctatcagaaggccctgcagtcccacctgaagggc
tctgacagcatcgtgtctctgccgcagtctgaccgctcgtcctcctcctcccaggagagt
ctgaaccggccactgtctgtgaagagtgtcattggagggagcatgacaaggagtaagctg
gtgggcagcagggtgtctccttcatcaggttctctccagcgttcccgtagtgacatcgac
gttaacgccgcctccagctcaaagtcccgtctgtccaccgtacctgcctcctcgcccttc
agttctgcagcggccctcccccccgggtcctacgcctcattaggtcgagtccgtaccagg
aggcagagctcgggcagtacggggggggccagcccctcagtggtggacagtaggggacgc
agccgagccaaaatcgtctcccagtcccagcgatccagatcagccaatcccatcaatgcc
ggcagtcgctccagctccccggggaagctgctgggccacagcagctacgggcgggtccct
cgggtctcagtgtcggcctccaccacgcctgctgacaagcgcagccgcgtcccccgcagc
cagggctgcagccgggacaccagccctacccgcctgggcctcgccagcctgtgtggtaaa
gctcttcttcctgctgctcttccctaccgcacgctagcccggagccgcatcccccgcccc
agcatgagtcagggctgcagtcgtgacaccagtcgcgagagcagccgcgacaccagccct
gctcggggcttcactcctctggcctcccgacgtcactcccgttcaaccagcgctctctcc
acagccgacccccacagccagtcagaccgatatggtttgatccaccaagccaggatctct
gcctctgtcaacgccatgagggtcctgaacaccggcacagaggtggaggcagcggtggct
gatgctctgctgttaggagactccaggaataagagaaagccgatgaggcgcaggtacgaa
tccccggggatatactctgacgacgacgccaacagcgacgcgtccagtgcctgctcggag
cgctcgtacagctccaggaacggagggatccctcactacctgcggcagacggaagacgtg
gccgaggtcctgaaccactgtgccagctccaactggtccgagaggaaggagggcctgctg
ggcctgcagaacctcttcaaaagccagaggatactcagccgagtggagctgaagagactt
tgtgagatcttcacaaggatgtttgcagacccacatagcaagagagtgttcagcatgttc
ctggagaccctggtggacttcgtcctggtgcacagggaggacctgcaggactggctcttt
gtgctgctcacccagctgctgaagaagatgggggccgacctgctgggctccgtgcaggcc
aaagtccagaaggccctggatatcacaagggattccttcccattcgatcagcagtttaac
atcctgatgcggttcatcgtggatcagactcagacccctaacctgaaggttaaggtggcc
attctgaagtacatcgacaccctggcccggcagatggacccgacagactttgtcaactcc
agtgagacgcgcctggccgtctctcgcatcatcacctggaccactgaacccaaaagttct
gatgtcaggaagacccttcatagctgggtgagcgaggagctagcgggcaggtccagccct
gcagccttactgtccgctgagggcaaccaggaagacaggtgtaagcaggcggcacaggtg
gtgctcatcgctctgtttgagctcaacaccccagagttcaccatgctgctgggagccctc
cccaaaacgttccaggacggagccaccaaactgctgcataaccacctgaagaactccagc
aacaccagcagcagtgtgggctctcccagcaacaccattggccggacgccgactcgccac
acccccagcaggaccagccccctcacctctccaacaaactgttcccatggaggactgtct
ccaagtcggttatggggttggggtggcgacggactgtcaaagcatccccctgcccctcct
cctcctcctcctcctcagccccactccacccctgctgccccctccctaagggtcctccgc
agagcatattcacccagcatgatggagtacgacactgaaaacatgaactctgaggagatc
tacagctcgctgcgcggtgtcactgaggccatccagagcttcagctaccggagccaggag
gacctgaacgagccaatcagacaggagggcaagagggacgacgcggcaggaagagagggc
gtagcgtcctctcctggctctgacgctcggctcggtttagacgtggtggaaggaggtcgc
accgctttagacaacaagacttccctgctcaacacgccgtcaccccgctccttttcgggg
ccacggggccgtgagttcgccccttatggctacggagagaccatttgcacctatgacaag
agcgccatgaaggaggccgtgttcgacgatgacgtagagcagttccgcgactgccgacgg
caggaaagtggtgaaaacaagatgacgctccccaaggtctttgctcctgcaggcggtcag
gaccactcggacctggtggcagacctgcttaaggaactgtccaatcacaacgagcgctct
gaggagcgtaaaggcgccctggtggagctgctgaagatcacacgagaggacaacctggca
gtgtgggacgaacacttcaaaaccatcctgctcctgctgctggagacgctgggggataaa
gaccacaccatccgggccctggctctgcgtttgctgaaagaaatcctgaggaatcagccg
gcgcgctttaaaaactacgctgagcttaccatcatgaaaactctggaggctcacaaggac
tctcacaaggaggttgtgcgagcagccgaggaggcggcctccaccctggccggctccatc
cacccggagcagtgcatcaaggtgctgtgccccatagtgcagacagccgactaccccatc
aacctggctgccatcaagatgcaaaccaaagtcattgaacgcatcgccaaggactccttg
ctgctgctgctgcccgacatcatccccggactcctgcagatgaagttactgaacctgtac
atcaagcgagcgcagaccaccaacagcaacagcagcagctcctcggacgtgtcctcccac
agctag
DBGET
integrated database retrieval system
