Notothenia coriiceps (black rockcod): 104955800
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Entry
104955800 CDS
T04920
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ncc03009
]
104955800 (nsun5)
Enzymes [BR:
ncc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
104955800 (nsun5)
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
Other ribosome biogenesis factors
104955800 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_fdxn-like
Methyltr_RsmB-F
NSUN5_N
FtsJ
RsmF-B_ferredox
CCDC106
Motif
Other DBs
NCBI-GeneID:
104955800
NCBI-ProteinID:
XP_010781499
UniProt:
A0A6I9NU57
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MALYVKAAEILDKAEKKQGALKTLVYDSKFENIKPLFALVLETQKFSSVLEEIIVSSKLL
KQTKMRMNLAKVLVFDLLIGQGLKCGGAWKTMMIKHRARLQSVLARMKVKQKVSKNEDLL
PASVKQVLAENLPRYVRVNTVKTTVEDAVDYLKRDGFSYLGQASRLEDLTLKEKYFVMDM
HLPELLVFPPNTDFHDHFLYKAGHIILQDKASCLPAYLLNPPAGAHIIDACAAPGNKTSH
LAAIMKNKGKLFAFDLDAKRLSTMATLLLRSGVTCHQLANQDFLKVDPDSPQFKDVEYVL
LDPSCSGSGMVCLRDDASSADQEKVKARLAALACFQLRCLNHGLKFPRLKRLVYSTCSIH
SQENEGVVAACLQENPGFRLVNLLSQWPERGLEPLTQCLRANPAKTRTHGFFVALLEKHN
GAGRKKQEPLVQISDPPVTISEAVNEAEKQEPAVQISAQEATPPIPSTRRKRPAASETED
KQTPAADQADGTPSKKRKRKKKKKKKKKKKVETVETVETVKTVE
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtacgtgaaagccgcagaaatcctggacaaagctgagaagaagcagggcgct
ttgaaaactctggtctacgacagcaaatttgagaacatcaaaccattgttcgctctggtt
ttggagacccagaagttttcctcagtcctggaggaaattatcgtttcctccaagctgctc
aagcagaccaagatgcgcatgaacctggccaaggtgctggtgttcgacctgctgataggc
caggggctgaagtgcggaggagcctggaagaccatgatgataaagcaccgcgcccggctg
cagtcggtgctggcccgtatgaaggtgaagcagaaggtcagcaagaatgaggacctgctc
ccggccagcgtcaagcaagtgctcgcggaaaatctgcccaggtatgtgcgtgtgaacacc
gtgaagaccaccgtggaggatgctgtggactatctgaagagggatggcttctcctacctg
ggacaggcgtccaggctggaggacttaaccctgaaggagaaatactttgtgatggacatg
catctgccagagctgctggtcttccctcctaacactgacttccacgaccacttcctgtat
aaggccggccacatcattttgcaggacaaagccagctgcctccctgcttacctcctcaac
cccccggctggtgcacatatcatcgatgcttgtgccgccccgggcaacaaaaccagccac
ctggcagccatcatgaagaacaagggcaagctgtttgcctttgacttggatgccaagcgt
ctgtccaccatggccactctcctgctcagatccggggtcacctgtcatcagctggccaac
caggacttcttgaaggtggaccctgacagcccgcagtttaaagatgttgaatacgtcctg
ctggatccttcctgcagtggatcaggcatggtgtgtctccgggacgatgcgtcctctgct
gaccaggagaaggttaaggctcgtctggccgccctggcctgcttccagctgcgctgtctc
aaccacggcctgaagttccctcgcctgaagcgcctggtgtactccacctgctccatccac
agccaggagaacgagggagtcgtagcggcctgtctgcaggagaaccccggcttcaggttg
gttaatctgctgtctcagtggcctgaacgaggcctggagccgctcactcagtgtctccga
gccaaccctgcaaaaacccgcacccacggcttcttcgtggctctgctggagaaacacaac
ggggctgggagaaagaagcaggagccattagttcagataagtgatcctcctgtcacaatc
agcgaggctgtgaatgaagcagagaagcaggagccagcggttcagataagcgctcaggag
gcgacaccacccatcccctccacccgtcggaagaggcctgcagcttcagagacggaggac
aaacagactcctgcagctgatcaggctgacggtacacccagcaagaagagaaagaggaag
aaaaagaagaagaagaagaagaagaagaaagtggaaacggtagaaacggtggaaacagtg
aaaacagtggagtga
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