Notothenia coriiceps (black rockcod): 104955853 Help Entry 104955853         CDS       T04920                                  Symbol itga11 Name (RefSeq) integrin alpha-11   KO K06587   integrin alpha 11 Organism ncc  Notothenia coriiceps (black rockcod) Pathway ncc04510   Focal adhesion ncc04512   ECM-receptor interaction ncc04518   Integrin signaling ncc04810   Regulation of actin cytoskeleton ncc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ncc00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     104955853 (itga11)    04518 Integrin signaling     104955853 (itga11)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     104955853 (itga11)   09142 Cell motility    04820 Cytoskeleton in muscle cells     104955853 (itga11)    04810 Regulation of actin cytoskeleton     104955853 (itga11)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ncc04515]     104955853 (itga11) Cell adhesion molecules [BR:ncc04515]  Integrins   Integrin alpha subunits    104955853 (itga11) SSDB OrthologParalogGFIT Motif Pfam:  VWA FG-GAP Integrin_A_Ig_2 VWA_2 Integrin_A_Ig_1 FG-GAP_3 Integrin_A_Ig_3 FG-GAP_2 Motif Other DBs NCBI-GeneID:  104955853 NCBI-ProteinID:  XP_010781544 UniProt:  A0A6I9NU92 LinkDB All DBs Position Unknown AA seq 1223 aa AA seqDB search MARDQEQPVTAGEARVGTVGGIKSHNLSHSCSGCCQQGRSAAVMLSVTHYNFLLGDDETF LEVTEQNNSCISQCAGQIQRMENNMQLLVGAPYEMNGPYQTGDIYKCSLSRRTNGNGCSK LNLGRISLTNVSERKDKMRLGMTLTSNPQDKSFVACGPLWSYECGSSYYSTGICSRVNES FKFSRTIAPAFQRCETYMDIVIVLDGSNSIYPWYEVQAFLINILQKFYIGPGQIQVGVVQ YGEKVVHEFKLSDYKSVEEVVKRARSINQRGGEETNTALGINIARSQAFKQGGRRGAKKV MIVITDGESHDSPDLKQAIEDSEKDGITRYAIAVLGYYNRRGINPEAFLNEIKYIASDPD DKHFFNVTDESALKDIVDALGERIFSLEGTSKNGTAFGLQMSQAGFSAHNVEDGILVGAV GAYDWNGAVLKETRQGKVVPPKSSYAHEFPEELKNHGAYLGYSVTSVVSARNGRLLVAGA PRFNHTGKVIIFTLKNSGNLTILHSLKGQQIGSYYGSEIAPLDIDGDGITDNLLVAAPMF FSGGMEKGKVYIYRVTELNRFILEGALEIHNGGQNARFGSSLAPVPDLNGDGFNDLVVGA PLEDDHKGAIYVFFSQQNRILRKYKQRIAATDLAPGLLYFGRSIHGTMDMNDDGLVDLAV GSLGAVVLLWSKSVIRIYTTIRFEPSKVNIFVKDCQRGGKDVTCMSAIVCFNITARTAIP PTQEIGIKYNVSTAERRFNPRAVLDNPNKLQPQNLTLFPGEETCEHIYFHVMETTDYARP IVFSAQVGLQDPDLGPVLDDSWPTVVSTELPFWNGCDEDDRCMPDLAVQSMTDLLTLNQF CAQSVQSRGVFCRRQSEGGAEGSLRVIEANRRRMVVDVQLENKGENAYSALLNISYTPNL RFSSLIVKDNSDIKVECLIEDKLRNEKICNVSAPFMRAKTQVTFRLEFEFSRTIFLDHIR VILEARSDGEEISTADNFNDIYYSLNYEADLLFTRDSHPTRYDIKSELSLEEPGVIGPPF NFTFQIQNLGYFPVNDLQLNIEIPETTKNGNQLLKISYFYIDQRDGTHCLPPQHVAQSRA SPEDLSRFSRLNRSNTLTLPIQCTVNVASYRDIAIRITGALRIDTLHALKFKILELGTSA SVELPSSSPMFLHEERPVRHIILEIRKEGDYRISNWIIIGSTLGGLLLLALLILALWKLG FFRRQKRKEKDEQETTGKVADER NT seq 3672 nt NT seq  +upstreamnt  +downstreamnt atggcaagggaccaggagcagcctgttacagcaggagaagccagggtgggaacagtgggg gggataaagagccacaatctgtcccacagttgctctggttgctgtcagcagggcagatct gctgctgtgatgctcagcgtgacgcattacaacttcctgctgggagatgatgagacattc ttggaggttacagagcagaataacagctgcatcagccagtgtgcaggacaaatacagagg atggagaacaacatgcagttattagtgggcgctccatatgaaatgaatggcccttaccag acaggggatatttataaatgttcactgagcagacgaaccaacggcaatggctgctccaag cttaacttaggaaggatatctctgaccaacgtgtcggagcgaaaagacaagatgaggctg ggaatgacgctcacttccaaccctcaagacaaaagctttgtggcctgtgggccgctatgg tcctatgagtgtggcagctcttactacagcactggcatatgctccagagtcaatgagagc ttcaagttttccagaacgattgcgcctgcctttcagagatgtgagacctacatggacatt gtgatcgttctggatggatctaactccatctatccctggtatgaagtgcaggcttttctc atcaacattcttcagaagttctatattggaccaggtcaaatacaggttggagtcgttcag tatggtgagaaggtggtccatgaattcaaactcagcgactacaaatctgttgaggaagtt gtgaaaagagcgcgcagtatcaaccaacgaggtggagaggagaccaacacggctctagga attaacatagcacgctcacaagctttcaaacaaggaggtcggcgcggtgccaagaaggtg atgatagtcatcactgatggagagtcacatgacagtccggatctcaagcaggccatcgag gacagtgagaaggatggcatcactcgttatgctattgctgttcttggctactacaaccgt cgtggaataaaccctgaggccttcctcaatgaaatcaagtacatcgccagcgacccagat gacaaacacttcttcaatgtcacggatgagtcggcgctgaaggatattgtggatgccctt ggagaacggatcttcagtttggaaggaaccagtaagaatgggacagcgtttggcctccag atgtctcaggcgggattttccgcacacaacgtcgaggatgggattctggtgggtgctgtc ggggcttacgattggaacggagcggtcctgaaggagacacgtcaggggaaggttgtcccg ccgaagtcctcctatgcacatgagttccctgaagagctcaaaaaccatggtgcctacttg ggttattctgtgacgtctgtggtgtcagcaagaaacggtcgtctgctcgtagcgggagct ccacgattcaaccacacgggcaaagtcatcatcttcaccctaaagaactcgggaaacctc accatcctgcactccctcaagggccagcagattggctcctactatggcagtgagatcgca cccttggacattgatggagacggtataacagacaacctcttggtggcagcacccatgttc ttcagtggaggcatggagaagggaaaagtctatatctacagagtgacagagctgaatcgt ttcatccttgagggagcgttggaaatccataatggaggccagaacgctcgcttcggctcc tctctcgctcccgtgcccgacctgaacggtgacggcttcaatgacctggtggtgggagcg ccgctggaagacgaccacaaaggagccatttatgttttcttcagccagcaaaacagaata ctgcgcaaatacaaacagaggatagcagcgacagatttggctcctggcctgctgtacttt ggccgcagtattcatggcacaatggacatgaacgatgatggtttagtggacctggcagta ggttcccttggtgctgttgttctcctttggtcaaagagtgtcatccggatatataccacc atcaggtttgagccaagtaaggtcaacatctttgtgaaggactgtcagagaggcggcaaa gacgtgacctgcatgtcagccattgtatgtttcaacatcactgccaggacggccattcct cccacgcaggaaattgggattaaatataatgtctccactgcggagagacgtttcaatcct cgggccgtactggacaacccaaacaagctgcagcctcaaaacctgaccctctttcctgga gaagagacctgtgaacacatctacttccacgtcatggaaaccacagactacgcacggccg attgtgttctctgctcaagtgggactacaagatccagacctcggaccagttctggatgat agctggccgactgttgtgagcactgagctgcccttctggaacggctgtgacgaggacgac cgctgcatgcctgacctggcagtgcagagtatgaccgacctcctgactctaaatcagttc tgtgcgcagtctgttcagtctcgtggtgttttctgccgccgtcaaagtgaaggcggggcc gaggggtctctgcgggttatagaggcaaacaggaggcgaatggtggtggatgtccaattg gagaacaaaggcgagaatgcctacagtgctctcctaaatatcagctacacacccaatcta cgcttctctagtctaatagtcaaggacaactctgacatcaaagtagagtgtttgattgag gacaaactgaggaatgagaagatctgcaatgtcagtgctccattcatgagggctaaaact caggttacatttcgtctggagtttgagttcagtcgcaccatcttcctggaccatatcaga gttatcctggaggccagaagcgatggtgaggaaatcagcacagctgataattttaatgac atctattactcactgaattacgaggcagaccttctcttcaccagggattcacatccgact cgatatgacatcaaatcagagctgtccctcgaggagcctggggttattggtcctcctttc aacttcactttccagatccagaaccttggctactttccagtaaatgatttgcagctgaac attgagatcccagagacgaccaaaaacggaaaccaactcctgaagatatcttacttctat attgaccagagggacggtacacactgtttgccccctcagcatgtggcgcagagcagagcg tcccctgaggatctgtcacgcttctcccgcttgaatcgatccaacaccctaactctgccg atccaatgcaccgtcaacgtggcctcctacagagacattgcaattagaatcacaggagca ctacgaatagatacattacacgcactgaagtttaaaatcctggaactgggaaccagcgca tcagtggagctcccctcctccagccccatgtttttacacgaggaaaggcctgtcagacat ataatattggagatcaggaaggagggagactacagaatttctaactggattatcattggc agcacgctgggaggactcttgttgttagccctgctcattctcgctctatggaagctcggc ttcttccggagacagaagcgaaaagaaaaagacgagcaggagacaaccgggaaagtggct gatgagcggtaa

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